| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is htrB [C]
Identifier: 78357005
GI number: 78357005
Start: 2010290
End: 2011204
Strand: Direct
Name: htrB [C]
Synonym: Dde_1962
Alternate gene names: 78357005
Gene position: 2010290-2011204 (Clockwise)
Preceding gene: 78357004
Following gene: 78357007
Centisome position: 53.89
GC content: 53.66
Gene sequence:
>915_bases ATGTTTGATTTCGCCTCAGAAAGTGCACTCTTTATCGGTAACAGAATAGGCTTTTCCACGGTTCGCAGATGCGGAAGGGG GCTTGGAACGCTGCTGTGGCACATTCTTCCGGACAGACGAAAGCTGGCCGTAGAATCTATACAAAAACGTCTGGGAGCCG GCAGACGGCAAGCAGAAGCAATCGCCAGAGAAAGCTTTAAAAGCAATTGTCAGTCGTTTGCCGAAATCCTGCTCAACCCC CGCCTGAAAGATTCTCTGCCCCCGCTGACCGACATTGACAATGCAGAGCAGCTGGCGCGCGTTCTGGCGCTGCCGCGCCC CATAGTGGGCATTACCGCCCATCTGGGCGCATGGGAAATGCTGACCGGCTGCCTGTCCCAACACGCACACTGCGGCAAAG AGCAGCTTGTGGTCACGCGCAGGCAAAAAAACATGTTTTTTCAAAAGGCTATTGTCGCTCTCCGCAGCGCAAACAATCTG CGTATAGTAGATCATAGAAATGCTGCGAGGCCCGTGCTCAAGGCGCTGAAAAACAACGCCATTGCCTGCTTTCTGGCAGA CCACAACTGCAGCGAAGCCGAGGCATTGTTCCTGCCCTTTCTCGGCAAAACCGCAGCAGTCAACAGAGGCCCTGCCATTC TTGCTGTAAGAGCAAAAGCCCTTGTGCTACCAGCATTTATGATAAGAGCTCCAAACGGTAGATTCCGTTTTCATCACTTG CCGCCACTGGACACCACGGAGCTTGAGGGTACAGCCGACGAGCGTGTCGAGGCCGTAACGCGTTACTATAACAGTGCCAT AGAGTCGATGGTCAAAAAATACCCCGAACAGTGGTTCTGGATGCACAAACGCTGGAAAACCCAGCCATCCGGGTCCCGCC GAGTCCAGATGGAGAAGAATCAGGGGACAGAATAA
Upstream 100 bases:
>100_bases GAGCCGTATGCACCGCAGGCAACGGCTACAGACCAGAACATGCTGGCAAGTGCAGCGGCGCAACTGCAGACAAAACTCAA CTCCCTGAAGAACCCGTACC
Downstream 100 bases:
>100_bases ATGAATGCCGTAAAGGGATCTGCGGAGCTCTGCAGTCCCCGGCATCCATACCTCAAACAATCTGAAATTCCGGCGACGGA GCTGTCATTCCACAATTATA
Product: acyltransferase
Products: NA
Alternate protein names: Lipid A Biosynthesis Lauroyl Acyltransferase; Acyltransferase; Bacterial Lipid A Biosynthesis Acyltransferase; Acyltransferase HtrB Family; Lauroyl/Myristoyl Acyltransferase; Lipid A Biosynthesis-Lipid IVA Acyltransferase; Lipid A Lauroyl Acyltransferase; Lipid A Biosynthesis Lauroyl/Myristoyl Acyltransferase; Lauroyl Transferase; Lipid A Biosynthesis Palmitoleoyl Acyltransferase; Lauroyl Acyltransferase; 1-Acylglycerol-3-Phosphate O-Acyltransferase; Lipid A Acyl Transferase; Lipid A Biosynthesis Lauroyl Acyltransferase Subfamily
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MFDFASESALFIGNRIGFSTVRRCGRGLGTLLWHILPDRRKLAVESIQKRLGAGRRQAEAIARESFKSNCQSFAEILLNP RLKDSLPPLTDIDNAEQLARVLALPRPIVGITAHLGAWEMLTGCLSQHAHCGKEQLVVTRRQKNMFFQKAIVALRSANNL RIVDHRNAARPVLKALKNNAIACFLADHNCSEAEALFLPFLGKTAAVNRGPAILAVRAKALVLPAFMIRAPNGRFRFHHL PPLDTTELEGTADERVEAVTRYYNSAIESMVKKYPEQWFWMHKRWKTQPSGSRRVQMEKNQGTE
Sequences:
>Translated_304_residues MFDFASESALFIGNRIGFSTVRRCGRGLGTLLWHILPDRRKLAVESIQKRLGAGRRQAEAIARESFKSNCQSFAEILLNP RLKDSLPPLTDIDNAEQLARVLALPRPIVGITAHLGAWEMLTGCLSQHAHCGKEQLVVTRRQKNMFFQKAIVALRSANNL RIVDHRNAARPVLKALKNNAIACFLADHNCSEAEALFLPFLGKTAAVNRGPAILAVRAKALVLPAFMIRAPNGRFRFHHL PPLDTTELEGTADERVEAVTRYYNSAIESMVKKYPEQWFWMHKRWKTQPSGSRRVQMEKNQGTE >Mature_304_residues MFDFASESALFIGNRIGFSTVRRCGRGLGTLLWHILPDRRKLAVESIQKRLGAGRRQAEAIARESFKSNCQSFAEILLNP RLKDSLPPLTDIDNAEQLARVLALPRPIVGITAHLGAWEMLTGCLSQHAHCGKEQLVVTRRQKNMFFQKAIVALRSANNL RIVDHRNAARPVLKALKNNAIACFLADHNCSEAEALFLPFLGKTAAVNRGPAILAVRAKALVLPAFMIRAPNGRFRFHHL PPLDTTELEGTADERVEAVTRYYNSAIESMVKKYPEQWFWMHKRWKTQPSGSRRVQMEKNQGTE
Specific function: Acylates The Intermediate (Kdo)2-Lipid IVa To Form (Kdo)2-(Lauroyl)-Lipid IVa. Has 10 Fold Selectivity For Lauroyl- Acp Over Myristoyl-Acp. [C]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787292, Length=292, Percent_Identity=23.6301369863014, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.-
Molecular weight: Translated: 34231; Mature: 34231
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDFASESALFIGNRIGFSTVRRCGRGLGTLLWHILPDRRKLAVESIQKRLGAGRRQAEA CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHH IARESFKSNCQSFAEILLNPRLKDSLPPLTDIDNAEQLARVLALPRPIVGITAHLGAWEM HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCHHHH LTGCLSQHAHCGKEQLVVTRRQKNMFFQKAIVALRSANNLRIVDHRNAARPVLKALKNNA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCC IACFLADHNCSEAEALFLPFLGKTAAVNRGPAILAVRAKALVLPAFMIRAPNGRFRFHHL EEEEEECCCCCCHHHHHHHHCCCHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEC PPLDTTELEGTADERVEAVTRYYNSAIESMVKKYPEQWFWMHKRWKTQPSGSRRVQMEKN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCC QGTE CCCC >Mature Secondary Structure MFDFASESALFIGNRIGFSTVRRCGRGLGTLLWHILPDRRKLAVESIQKRLGAGRRQAEA CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHH IARESFKSNCQSFAEILLNPRLKDSLPPLTDIDNAEQLARVLALPRPIVGITAHLGAWEM HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCHHHH LTGCLSQHAHCGKEQLVVTRRQKNMFFQKAIVALRSANNLRIVDHRNAARPVLKALKNNA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCC IACFLADHNCSEAEALFLPFLGKTAAVNRGPAILAVRAKALVLPAFMIRAPNGRFRFHHL EEEEEECCCCCCHHHHHHHHCCCHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEC PPLDTTELEGTADERVEAVTRYYNSAIESMVKKYPEQWFWMHKRWKTQPSGSRRVQMEKN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCC QGTE CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Acyltransferases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA