| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is yjgP [C]
Identifier: 78356991
GI number: 78356991
Start: 1998527
End: 1999720
Strand: Direct
Name: yjgP [C]
Synonym: Dde_1948
Alternate gene names: 78356991
Gene position: 1998527-1999720 (Clockwise)
Preceding gene: 78356990
Following gene: 78356992
Centisome position: 53.58
GC content: 52.76
Gene sequence:
>1194_bases GTGGAGGGGACTCTGTTCCGTTTTCATATAACGCTGTTGCAGAAGCAGCTGTTCAAAGAGCTTGTCTCTCTTTTCGGCCT CTGCCTCGGCTCACTTCTTTCTCTGATTCTTATCGGCAGAATGCTGCAGTTGCGCGAGCTGTTTCTGGGTCTCGACCTGA ATGCGCTCGATATGGCGACACTTTTCGTATACCTGAGTCCGCTTTTTCTCACCCTGATAATACCCATTGCCTGCATGCTC AGCGTGTTTCTGGCTTTTCTGCGTATGAGTACCGACAGAGAGCTGGTGGCGCTCAAGGCCGGCGGGCTGAGCCTGTTTCA ACTGCTTCCGGCGCCGCTGCTTTTCTGTCTGCTGTGCGGCCTGCTCAACCTGTATATTTCTCTTAGCGGTGTCGCCTGGG GAATGGGCAATTTTCGCCACACCATAATGGAAATAGCCAACACCCGTGCGAAGATAGTTCTCCAGCCGGGCGTGTTCAAT CAGACTGTTCCCGGGCTTACGGTGTTTGCCCGCACGGTGGACAACAGTTCGGGCAAACTTGGGCATGTACTGGTTGAAGA TAACAGCAGAGACGAAACAAGTATTCTCATTCTGGCACCCCGGGGACAGCTGCGCTCGGATGAACAGCGGGGCGAACTGG TTTTTATACTCCACAACGGAAAAATATACCGCCAGCAGGAAGACAGCGTAAGCGTGCTCGACTTTAATGACTACACTGTC CGCCTTGACCTCGGCCAGATTTTCAAAGGGGTGAGTCTGGGAAAAGTAAAACCCAAAGAACTTTCATGGAGCGAGCTGCG CAGCATCGGTCCGGACCACCCGGAAGCCCGAAGGGACAGTAATTTTCTGCGCAAAGTTCATGTAGAGCTTCAAAAACGCT GGGTGCTGCCCATGGCATGCCTTGTTCTGGGGCTTTTCGCCATGCCGCTTGCATGCGCTTTTCAGGGACTGGACAAACAA TTCGGCATTCTGCTGGCTCTGGGGATGTTTCTGATTTACTACACGATGCTTTCAGTAGGCCTTTCCACCGGAGAATCCGG CACCGTTCCTCCTGCCGTGGGGTTATGGATGCCTAACCTCATATTCCTTGCCGTAGGGCTTTTCTGGCTGGACAGGGCAG AAAGAGAACGCTCGCTCAATATCATGAGTTTTATTCTGCATGCGAACCTGTTCCGCAAAAAGAGGGCACAGTGA
Upstream 100 bases:
>100_bases TCGAGCAGGCGGGTATGCGCTTTAACCTGAGCCCGCGGGAATGTGAAATGCTGGAGCATTTCCTGAAGAAAAACATTGTG GGCGACACCCCGCAGGAATA
Downstream 100 bases:
>100_bases GCATCCTTTCCCGCTATCTGCTCAGAACAAACCTGTTTCTGACCATGCTGACACTGACCATCGGCACCGGTATCTATCTG CTTTCCGACCTGTTTGACAG
Product: permease
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ; Permease YjgP/YjgQ Family; YjgP/YjgQ Permease; Permease Family Protein; YjgP/YjgQ Family Permease; YjgP/YjgQ Family Protein
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MEGTLFRFHITLLQKQLFKELVSLFGLCLGSLLSLILIGRMLQLRELFLGLDLNALDMATLFVYLSPLFLTLIIPIACML SVFLAFLRMSTDRELVALKAGGLSLFQLLPAPLLFCLLCGLLNLYISLSGVAWGMGNFRHTIMEIANTRAKIVLQPGVFN QTVPGLTVFARTVDNSSGKLGHVLVEDNSRDETSILILAPRGQLRSDEQRGELVFILHNGKIYRQQEDSVSVLDFNDYTV RLDLGQIFKGVSLGKVKPKELSWSELRSIGPDHPEARRDSNFLRKVHVELQKRWVLPMACLVLGLFAMPLACAFQGLDKQ FGILLALGMFLIYYTMLSVGLSTGESGTVPPAVGLWMPNLIFLAVGLFWLDRAERERSLNIMSFILHANLFRKKRAQ
Sequences:
>Translated_397_residues MEGTLFRFHITLLQKQLFKELVSLFGLCLGSLLSLILIGRMLQLRELFLGLDLNALDMATLFVYLSPLFLTLIIPIACML SVFLAFLRMSTDRELVALKAGGLSLFQLLPAPLLFCLLCGLLNLYISLSGVAWGMGNFRHTIMEIANTRAKIVLQPGVFN QTVPGLTVFARTVDNSSGKLGHVLVEDNSRDETSILILAPRGQLRSDEQRGELVFILHNGKIYRQQEDSVSVLDFNDYTV RLDLGQIFKGVSLGKVKPKELSWSELRSIGPDHPEARRDSNFLRKVHVELQKRWVLPMACLVLGLFAMPLACAFQGLDKQ FGILLALGMFLIYYTMLSVGLSTGESGTVPPAVGLWMPNLIFLAVGLFWLDRAERERSLNIMSFILHANLFRKKRAQ >Mature_397_residues MEGTLFRFHITLLQKQLFKELVSLFGLCLGSLLSLILIGRMLQLRELFLGLDLNALDMATLFVYLSPLFLTLIIPIACML SVFLAFLRMSTDRELVALKAGGLSLFQLLPAPLLFCLLCGLLNLYISLSGVAWGMGNFRHTIMEIANTRAKIVLQPGVFN QTVPGLTVFARTVDNSSGKLGHVLVEDNSRDETSILILAPRGQLRSDEQRGELVFILHNGKIYRQQEDSVSVLDFNDYTV RLDLGQIFKGVSLGKVKPKELSWSELRSIGPDHPEARRDSNFLRKVHVELQKRWVLPMACLVLGLFAMPLACAFQGLDKQ FGILLALGMFLIYYTMLSVGLSTGESGTVPPAVGLWMPNLIFLAVGLFWLDRAERERSLNIMSFILHANLFRKKRAQ
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44459; Mature: 44459
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGTLFRFHITLLQKQLFKELVSLFGLCLGSLLSLILIGRMLQLRELFLGLDLNALDMAT CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LFVYLSPLFLTLIIPIACMLSVFLAFLRMSTDRELVALKAGGLSLFQLLPAPLLFCLLCG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH LLNLYISLSGVAWGMGNFRHTIMEIANTRAKIVLQPGVFNQTVPGLTVFARTVDNSSGKL HHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCE GHVLVEDNSRDETSILILAPRGQLRSDEQRGELVFILHNGKIYRQQEDSVSVLDFNDYTV EEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCEEEEECCCCEEEEECCCEEE RLDLGQIFKGVSLGKVKPKELSWSELRSIGPDHPEARRDSNFLRKVHVELQKRWVLPMAC EEEHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LVLGLFAMPLACAFQGLDKQFGILLALGMFLIYYTMLSVGLSTGESGTVPPAVGLWMPNL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH IFLAVGLFWLDRAERERSLNIMSFILHANLFRKKRAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEGTLFRFHITLLQKQLFKELVSLFGLCLGSLLSLILIGRMLQLRELFLGLDLNALDMAT CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LFVYLSPLFLTLIIPIACMLSVFLAFLRMSTDRELVALKAGGLSLFQLLPAPLLFCLLCG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH LLNLYISLSGVAWGMGNFRHTIMEIANTRAKIVLQPGVFNQTVPGLTVFARTVDNSSGKL HHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCE GHVLVEDNSRDETSILILAPRGQLRSDEQRGELVFILHNGKIYRQQEDSVSVLDFNDYTV EEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCEEEEECCCCEEEEECCCEEE RLDLGQIFKGVSLGKVKPKELSWSELRSIGPDHPEARRDSNFLRKVHVELQKRWVLPMAC EEEHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LVLGLFAMPLACAFQGLDKQFGILLALGMFLIYYTMLSVGLSTGESGTVPPAVGLWMPNL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH IFLAVGLFWLDRAERERSLNIMSFILHANLFRKKRAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA