| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is yjgQ [C]
Identifier: 78356992
GI number: 78356992
Start: 1999717
End: 2000796
Strand: Direct
Name: yjgQ [C]
Synonym: Dde_1949
Alternate gene names: 78356992
Gene position: 1999717-2000796 (Clockwise)
Preceding gene: 78356991
Following gene: 78356994
Centisome position: 53.61
GC content: 55.19
Gene sequence:
>1080_bases GTGAGCATCCTTTCCCGCTATCTGCTCAGAACAAACCTGTTTCTGACCATGCTGACACTGACCATCGGCACCGGTATCTA TCTGCTTTCCGACCTGTTTGACAGGCTGGATGATTTTCTGGGAGCCGGGCTGGGCCTCAAAGTTATCCTGACGTACTTTG CGGTCAAAATACCGCTGATCATTTCTCAGATCCTGCCCGCCGTATTTCTGCTGTCGGCAGTCATCCAGCTGTGTGTCATG GCGCGGGACAGAGAGCTGGTAGCCCTTCAGGCGGGCGGCATCTCCTTCCTGCGCCTCGCGCGTTTCTTTATAATTTATGC ACTCATCTGGTCAGCTGTTCAGCTGGGTTTTTCGCAGGTGCTGGGCATATACGGAGAACGGGAAGCCAGCAGAATCTGGA AGGAACAAGTCCGTAACCGGGAAATAGACGAAGTGCAGCTTACCAACCTGTGGTTCACCGAGCATGGTCGCATCATCCAT CTGGAAACGCTGCACCCTGCGGCCCAGAAAGGCTCCGGCATAACGGTCTACGAGCTCACGCCCGACGAGCTTTCCGTGCA GCGGGTGATCCGGGGCAAAAGTTTTCGTGCCGACTCTTCCGGCTGGACTCTTGACGGCTGCGACATTCTTATTCCGGGCA GTTACGAGGTGGCCACCTCCGAATCGATTGTCCTGCCCATTGAACAGGACGTCAAAGCGTTTTCCATTGTCGATCCGAGA GGCGACCCTTCGCGTCTGCCCCTGTGGCAGCTGCAGGACGCCATAGCCCGCCTTACCGAAAGCGGCTCCAATGTTGAAGC CTTACGCACGGCATGGCACATGAAGCTCTCCTATGCATTTTCGCTGGTAACCATGGCTCTGCTGGCACTGGCACTTATAA CATGGCGAGACAGCATATACATAAACGTGGGAACATCACTGCTGCTGGTATTTGTCTTTTACACGCTATTCACCGTAGGG GGTTCTCTGGGCGAGAACGGCATAGTCCCCCCATTGTTTGCCGCATGGACAGCCAACGCGTTTTTCAGCCTTTCAGCCAT CGCCAGACTGATTTATGTATCCAGAGCCCGCGCCGCCTGA
Upstream 100 bases:
>100_bases CCGTAGGGCTTTTCTGGCTGGACAGGGCAGAAAGAGAACGCTCGCTCAATATCATGAGTTTTATTCTGCATGCGAACCTG TTCCGCAAAAAGAGGGCACA
Downstream 100 bases:
>100_bases CAAAAAGCCCCGCAGACATCGTCTGCGGGGCTTTTTGTGATCACTCAGCGCGTTCGCTTGCCGCTTCCGGCTCATCAGCC GGTTCCGGCGCCCCGTCTGA
Product: permease
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MSILSRYLLRTNLFLTMLTLTIGTGIYLLSDLFDRLDDFLGAGLGLKVILTYFAVKIPLIISQILPAVFLLSAVIQLCVM ARDRELVALQAGGISFLRLARFFIIYALIWSAVQLGFSQVLGIYGEREASRIWKEQVRNREIDEVQLTNLWFTEHGRIIH LETLHPAAQKGSGITVYELTPDELSVQRVIRGKSFRADSSGWTLDGCDILIPGSYEVATSESIVLPIEQDVKAFSIVDPR GDPSRLPLWQLQDAIARLTESGSNVEALRTAWHMKLSYAFSLVTMALLALALITWRDSIYINVGTSLLLVFVFYTLFTVG GSLGENGIVPPLFAAWTANAFFSLSAIARLIYVSRARAA
Sequences:
>Translated_359_residues MSILSRYLLRTNLFLTMLTLTIGTGIYLLSDLFDRLDDFLGAGLGLKVILTYFAVKIPLIISQILPAVFLLSAVIQLCVM ARDRELVALQAGGISFLRLARFFIIYALIWSAVQLGFSQVLGIYGEREASRIWKEQVRNREIDEVQLTNLWFTEHGRIIH LETLHPAAQKGSGITVYELTPDELSVQRVIRGKSFRADSSGWTLDGCDILIPGSYEVATSESIVLPIEQDVKAFSIVDPR GDPSRLPLWQLQDAIARLTESGSNVEALRTAWHMKLSYAFSLVTMALLALALITWRDSIYINVGTSLLLVFVFYTLFTVG GSLGENGIVPPLFAAWTANAFFSLSAIARLIYVSRARAA >Mature_358_residues SILSRYLLRTNLFLTMLTLTIGTGIYLLSDLFDRLDDFLGAGLGLKVILTYFAVKIPLIISQILPAVFLLSAVIQLCVMA RDRELVALQAGGISFLRLARFFIIYALIWSAVQLGFSQVLGIYGEREASRIWKEQVRNREIDEVQLTNLWFTEHGRIIHL ETLHPAAQKGSGITVYELTPDELSVQRVIRGKSFRADSSGWTLDGCDILIPGSYEVATSESIVLPIEQDVKAFSIVDPRG DPSRLPLWQLQDAIARLTESGSNVEALRTAWHMKLSYAFSLVTMALLALALITWRDSIYINVGTSLLLVFVFYTLFTVGG SLGENGIVPPLFAAWTANAFFSLSAIARLIYVSRARAA
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39883; Mature: 39752
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILSRYLLRTNLFLTMLTLTIGTGIYLLSDLFDRLDDFLGAGLGLKVILTYFAVKIPLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ISQILPAVFLLSAVIQLCVMARDRELVALQAGGISFLRLARFFIIYALIWSAVQLGFSQV HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIYGEREASRIWKEQVRNREIDEVQLTNLWFTEHGRIIHLETLHPAAQKGSGITVYELT HHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEECCCCHHHCCCCEEEEEEC PDELSVQRVIRGKSFRADSSGWTLDGCDILIPGSYEVATSESIVLPIEQDVKAFSIVDPR CHHHHHHHHHCCCCCCCCCCCCEECCCEEEECCCEEEECCCCEEEEEHHCCCEEEEECCC GDPSRLPLWQLQDAIARLTESGSNVEALRTAWHMKLSYAFSLVTMALLALALITWRDSIY CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE INVGTSLLLVFVFYTLFTVGGSLGENGIVPPLFAAWTANAFFSLSAIARLIYVSRARAA EECHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SILSRYLLRTNLFLTMLTLTIGTGIYLLSDLFDRLDDFLGAGLGLKVILTYFAVKIPLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ISQILPAVFLLSAVIQLCVMARDRELVALQAGGISFLRLARFFIIYALIWSAVQLGFSQV HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIYGEREASRIWKEQVRNREIDEVQLTNLWFTEHGRIIHLETLHPAAQKGSGITVYELT HHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEECCCCHHHCCCCEEEEEEC PDELSVQRVIRGKSFRADSSGWTLDGCDILIPGSYEVATSESIVLPIEQDVKAFSIVDPR CHHHHHHHHHCCCCCCCCCCCCEECCCEEEECCCEEEECCCCEEEEEHHCCCEEEEECCC GDPSRLPLWQLQDAIARLTESGSNVEALRTAWHMKLSYAFSLVTMALLALALITWRDSIY CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE INVGTSLLLVFVFYTLFTVGGSLGENGIVPPLFAAWTANAFFSLSAIARLIYVSRARAA EECHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA