| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356925
Identifier: 78356925
GI number: 78356925
Start: 1932757
End: 1933131
Strand: Reverse
Name: 78356925
Synonym: Dde_1882
Alternate gene names: NA
Gene position: 1933131-1932757 (Counterclockwise)
Preceding gene: 78356926
Following gene: 78356924
Centisome position: 51.82
GC content: 65.33
Gene sequence:
>375_bases ATGGGTGATCTCAGCAAGAATTTCAACCGTTCGGAATTCGCCTGCAAGGGCAAGAACTGCTGCGGCCATTCGGCTGCGGT CCATCCCGACCTGGTCGACGCCCTACAGGCGTTGCGCGACCGTGTCGGCAAACCGCTGTCCATCACCAGCGGCTTCCGCT GCAACCGGCACAACAAGGCGGTGGGCGGCGCGGAGCAGAGTTTCCACACACTGGGCATGGCGGCCGACGTGAGCTGTCCC GCTGGCGTTTCGCCTGAGGAGCTGGCGGTCGTCGCCGAGGAGATTCCGCTCTTCCGCGAGGGCGGCATCGGCGTCTATGC CTCCTGGGTCCATCTCGACGTGCGCCAGTCGGGCAAGGCGAGGTGGCGGTCATGA
Upstream 100 bases:
>100_bases AAACCCAACGACAAGGAGGCCCCGCCCACGCCGCAAAACGAGCCGCCAGCCATGGTGACCATCAATGCGGACACCAGCGC GGTCACACAAGGAGGCGGCA
Downstream 100 bases:
>100_bases GCGCCGAAGCCAAGACTCTGTTTTCCGGCACCGCGCTGGGTCTCTCCGGGCCGCTTCGGGTGGAGATTCTTGCCAATGGA ATGACCGCGAGGCTGACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Muramoyl-Pentapeptide Carboxypeptidase
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MGDLSKNFNRSEFACKGKNCCGHSAAVHPDLVDALQALRDRVGKPLSITSGFRCNRHNKAVGGAEQSFHTLGMAADVSCP AGVSPEELAVVAEEIPLFREGGIGVYASWVHLDVRQSGKARWRS
Sequences:
>Translated_124_residues MGDLSKNFNRSEFACKGKNCCGHSAAVHPDLVDALQALRDRVGKPLSITSGFRCNRHNKAVGGAEQSFHTLGMAADVSCP AGVSPEELAVVAEEIPLFREGGIGVYASWVHLDVRQSGKARWRS >Mature_123_residues GDLSKNFNRSEFACKGKNCCGHSAAVHPDLVDALQALRDRVGKPLSITSGFRCNRHNKAVGGAEQSFHTLGMAADVSCPA GVSPEELAVVAEEIPLFREGGIGVYASWVHLDVRQSGKARWRS
Specific function: Unknown
COG id: COG3108
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13308; Mature: 13177
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDLSKNFNRSEFACKGKNCCGHSAAVHPDLVDALQALRDRVGKPLSITSGFRCNRHNKA CCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCEECCCCCC VGGAEQSFHTLGMAADVSCPAGVSPEELAVVAEEIPLFREGGIGVYASWVHLDVRQSGKA CCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCEEEEEEEEEECCCCCCC RWRS CCCC >Mature Secondary Structure GDLSKNFNRSEFACKGKNCCGHSAAVHPDLVDALQALRDRVGKPLSITSGFRCNRHNKA CCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCEECCCCCC VGGAEQSFHTLGMAADVSCPAGVSPEELAVVAEEIPLFREGGIGVYASWVHLDVRQSGKA CCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCEEEEEEEEEECCCCCCC RWRS CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA