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The map label for this gene is 78356926

Identifier: 78356926

GI number: 78356926

Start: 1933124

End: 1934407

Strand: Reverse

Name: 78356926

Synonym: Dde_1883

Alternate gene names: NA

Gene position: 1934407-1933124 (Counterclockwise)

Preceding gene: 78356927

Following gene: 78356925

Centisome position: 51.86

GC content: 60.51

Gene sequence:

>1284_bases
ATGGATCTGAATACATTCAAACCGACATTTCTGATTCAGATCGAGGGGCAAGTCCTCTCGAAGGACATCACCCAGGAAAT
CACCTCGTTCGTCTTCACCGACAACGAGGAGGAGCTGGATATCCTCGAACTTTCGGTGACCGACCGCAACCTGCAGTTCG
TCGATGATCCGCTGTTCCAGGAAGGCAATGAGATCGTGGCCCGCTTCGGCTACGTGGGGAACCTCTCTCCGCGTAAGAAG
GCGGTCATCAAAGACATCGATTACGATTTTCCGGAAAACGGCGACCCGACCATCCGCATCAAGGCCTACGACAAGGGCTT
CAAACTCGCGGGCAAGGAAAACCAGAAGGTCTGGCAGAAACCCGCTCCCGGCATCCTCTATTCCGAAATCGCCGAGCAGA
TCGCCGCCGCCAACGGCCTCACGCCGGTGGTCACGGCCACCAAGGGCAACCATCTCCGCGTCACTCAGAGCAACATCTCG
GACGCTCAGTTCCTCAAGGAGCTGTCGGAAAAGGCCCGTGATCGCGATGGCGACGGTGTGAGCGGCTATGTCTTCTACGT
CCAGGACGACGAACTCCATTTCCATCCCCGCGAGCTCGACCAGACACCGCTTCTGACCCTCGAATATTTCACCGACACCA
AAGGCCTGTTGCGTTCGTTCCGTCCGAGTACCCAGTCCCAAGGAGCCAAGGGCGCGGGTGTCGAGACCAAAACGGTCGGC
ATCGACCCGCGCAAGAAGGATGTGGTCGAGCACAAGGCCAACAACGCCAGCACGCCCGAGCGAACGGCCCTGGGCAAGCA
GACCTATCTGGTCGACGGCAACACCGGCGAAGGCAGCTTCAAGGAACAGGAGACGGGGCAGATCGTGCCCAGCTACGACC
GTTCCGAAGGTTTTCACGAAGAGCCGCGCCAGGAGCCCGCCCAGGACAGCGCCGAAGGCAAGTTCCGCGAGGCCGAGCTG
CGCCAGGTCGAGGCGGACGCCGCCACCATCGGCATTCCCCAGCTACGCGCCAAGAAGAACGTCGAGATCAAGGGCGTGGG
ACGGAAGTTCTCCGGCATCTATTACTGCCACTCGGTGCGCCACAGCATCAGCGGTGCTGGCTATCTCAGCGAACTCAAAC
TCAAGAAGAACGCCCTCGGCAAAGGCGCGGGCGACAAGTCCGCCGAGTCCCAGGGTAAACCCAACGACAAGGAGGCCCCG
CCCACGCCGCAAAACGAGCCGCCAGCCATGGTGACCATCAATGCGGACACCAGCGCGGTCACACAAGGAGGCGGCAATGG
GTGA

Upstream 100 bases:

>100_bases
CCGCGAACATGTTCAAATGCGCCTGCTCGACTGAGGTTTCCGACACCTCACCATGCCTTCCGGTAAGTAAGCAGGGAACT
GCGAACCGCCGGAGAGACGC

Downstream 100 bases:

>100_bases
TCTCAGCAAGAATTTCAACCGTTCGGAATTCGCCTGCAAGGGCAAGAACTGCTGCGGCCATTCGGCTGCGGTCCATCCCG
ACCTGGTCGACGCCCTACAG

Product: Phage protein D-like

Products: NA

Alternate protein names: Rhs Element Vgr Protein; Phage Protein D-Like Protein

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MDLNTFKPTFLIQIEGQVLSKDITQEITSFVFTDNEEELDILELSVTDRNLQFVDDPLFQEGNEIVARFGYVGNLSPRKK
AVIKDIDYDFPENGDPTIRIKAYDKGFKLAGKENQKVWQKPAPGILYSEIAEQIAAANGLTPVVTATKGNHLRVTQSNIS
DAQFLKELSEKARDRDGDGVSGYVFYVQDDELHFHPRELDQTPLLTLEYFTDTKGLLRSFRPSTQSQGAKGAGVETKTVG
IDPRKKDVVEHKANNASTPERTALGKQTYLVDGNTGEGSFKEQETGQIVPSYDRSEGFHEEPRQEPAQDSAEGKFREAEL
RQVEADAATIGIPQLRAKKNVEIKGVGRKFSGIYYCHSVRHSISGAGYLSELKLKKNALGKGAGDKSAESQGKPNDKEAP
PTPQNEPPAMVTINADTSAVTQGGGNG

Sequences:

>Translated_427_residues
MDLNTFKPTFLIQIEGQVLSKDITQEITSFVFTDNEEELDILELSVTDRNLQFVDDPLFQEGNEIVARFGYVGNLSPRKK
AVIKDIDYDFPENGDPTIRIKAYDKGFKLAGKENQKVWQKPAPGILYSEIAEQIAAANGLTPVVTATKGNHLRVTQSNIS
DAQFLKELSEKARDRDGDGVSGYVFYVQDDELHFHPRELDQTPLLTLEYFTDTKGLLRSFRPSTQSQGAKGAGVETKTVG
IDPRKKDVVEHKANNASTPERTALGKQTYLVDGNTGEGSFKEQETGQIVPSYDRSEGFHEEPRQEPAQDSAEGKFREAEL
RQVEADAATIGIPQLRAKKNVEIKGVGRKFSGIYYCHSVRHSISGAGYLSELKLKKNALGKGAGDKSAESQGKPNDKEAP
PTPQNEPPAMVTINADTSAVTQGGGNG
>Mature_427_residues
MDLNTFKPTFLIQIEGQVLSKDITQEITSFVFTDNEEELDILELSVTDRNLQFVDDPLFQEGNEIVARFGYVGNLSPRKK
AVIKDIDYDFPENGDPTIRIKAYDKGFKLAGKENQKVWQKPAPGILYSEIAEQIAAANGLTPVVTATKGNHLRVTQSNIS
DAQFLKELSEKARDRDGDGVSGYVFYVQDDELHFHPRELDQTPLLTLEYFTDTKGLLRSFRPSTQSQGAKGAGVETKTVG
IDPRKKDVVEHKANNASTPERTALGKQTYLVDGNTGEGSFKEQETGQIVPSYDRSEGFHEEPRQEPAQDSAEGKFREAEL
RQVEADAATIGIPQLRAKKNVEIKGVGRKFSGIYYCHSVRHSISGAGYLSELKLKKNALGKGAGDKSAESQGKPNDKEAP
PTPQNEPPAMVTINADTSAVTQGGGNG

Specific function: Unknown

COG id: COG3500

COG function: function code R; Phage protein D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46895; Mature: 46895

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLNTFKPTFLIQIEGQVLSKDITQEITSFVFTDNEEELDILELSVTDRNLQFVDDPLFQ
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHEECCCCCCEEEEEEEEECCCCEECCCHHHH
EGNEIVARFGYVGNLSPRKKAVIKDIDYDFPENGDPTIRIKAYDKGFKLAGKENQKVWQK
CCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEECCCCCCHHHCC
PAPGILYSEIAEQIAAANGLTPVVTATKGNHLRVTQSNISDAQFLKELSEKARDRDGDGV
CCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCC
SGYVFYVQDDELHFHPRELDQTPLLTLEYFTDTKGLLRSFRPSTQSQGAKGAGVETKTVG
EEEEEEEECCCEEECCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEEC
IDPRKKDVVEHKANNASTPERTALGKQTYLVDGNTGEGSFKEQETGQIVPSYDRSEGFHE
CCCCHHHHHHHCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
EPRQEPAQDSAEGKFREAELRQVEADAATIGIPQLRAKKNVEIKGVGRKFSGIYYCHSVR
CCCCCCCCCCCCCCHHHHHHHHHHCCHHEECCCCHHCCCCCEEEECCCCCCCEEEEHHHH
HSISGAGYLSELKLKKNALGKGAGDKSAESQGKPNDKEAPPTPQNEPPAMVTINADTSAV
HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHH
TQGGGNG
CCCCCCC
>Mature Secondary Structure
MDLNTFKPTFLIQIEGQVLSKDITQEITSFVFTDNEEELDILELSVTDRNLQFVDDPLFQ
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHEECCCCCCEEEEEEEEECCCCEECCCHHHH
EGNEIVARFGYVGNLSPRKKAVIKDIDYDFPENGDPTIRIKAYDKGFKLAGKENQKVWQK
CCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEECCCCCCHHHCC
PAPGILYSEIAEQIAAANGLTPVVTATKGNHLRVTQSNISDAQFLKELSEKARDRDGDGV
CCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCC
SGYVFYVQDDELHFHPRELDQTPLLTLEYFTDTKGLLRSFRPSTQSQGAKGAGVETKTVG
EEEEEEEECCCEEECCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEEC
IDPRKKDVVEHKANNASTPERTALGKQTYLVDGNTGEGSFKEQETGQIVPSYDRSEGFHE
CCCCHHHHHHHCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
EPRQEPAQDSAEGKFREAELRQVEADAATIGIPQLRAKKNVEIKGVGRKFSGIYYCHSVR
CCCCCCCCCCCCCCHHHHHHHHHHCCHHEECCCCHHCCCCCEEEECCCCCCCEEEEHHHH
HSISGAGYLSELKLKKNALGKGAGDKSAESQGKPNDKEAPPTPQNEPPAMVTINADTSAV
HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHH
TQGGGNG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA