| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356917
Identifier: 78356917
GI number: 78356917
Start: 1925996
End: 1927405
Strand: Reverse
Name: 78356917
Synonym: Dde_1874
Alternate gene names: NA
Gene position: 1927405-1925996 (Counterclockwise)
Preceding gene: 78356918
Following gene: 78356916
Centisome position: 51.67
GC content: 64.89
Gene sequence:
>1410_bases ATGGGCCGCGCAAGCATCGGATACATCAACAAGGATTACGAATCGATCCGTCAGGAGCTGCTGGCGAAGATCCCGCAGCT CACCGACCGCTGGACCGATTTCAACCACTCCGATCTCGGCGTCGTCCTGCTCGATCTGTTCTGCGGCGTGGGCGACATGC TGGCCTACTACCTGGACGCCCAGGCGGCCGAGGCCTTTCTGCCCACGGCCCGCCAGCGCCAGAACGTCATCAACCTCTGC AAGCTCATCGGCTACCGGCTGGATTCGCCGGTGGCCTCCACCACCACGCTGCGTTTCCGGCTCTCCGCCCCGCTCGGCAA GGATCTGACCATTCCGGCGGGAACGGCCTGCCGCGCCTTGCTGAGTGACGGCGAGGCGGATTTCGAGACGGTCGAGGACG GCCTGCTCCCGCGAGGCCTACTCTCGGTGGACATCCCGGCCCGGCAAGGCGTGCGCCGCACCGAGACCTTCACTTCGACG GGGCTGCCATTCCAGCGCATCCGCCTGACCGGCGACGTCATCGCCCAGGGCACCATCACCGTTACGGTGGGGGACGACGC CTGGAGCGAGGTCGATCACTTCCAGGACAGCCTGGCCGACAGCCGCCATTTCATGGCCGACCTGGACGCCCTCGACATCT CCACCCTGATTTTCGGCGACGGACAAAGCGGCGCTGTACCCGCTCAGGGAAGCGCCATCGCCGTCAGCTATCTGCAGACC ATCGGGGACCAGGGCAATCTCGGTCCGAACCGGATCACCCAACTGCTGAGCCCGGTCTACCTGAACGGCGGCCAGGTCTC CCTGACCGCCACCAACCCGGTACCCGCCACCGGCGGCGCTTCGCGGGAAGCCCTCGAACACGCCCGCCGACAGGCACCGG CGGAGCTGCGCAGTCTCTGGAAAGCCGTCACCCTGGAGGATTACCAGGCGCTCGCCGAAGGTTACCCAGGCGTCGCCAAG GCCAAGGTGCTCGACACCAATGCCTGTCAGAACATCCGCTATTACAACGTTCAACTGGCCATCGCCCCCAACGGCGGCGG AATGCCCTCGGCGCTGCTCAAGCGGGACCTCGCCGAGTTTCTCGAACGCCGCAAGGTCATCACGGTCGAGATCAACCTGT TCGACCCGATCTATCGGCCCGTTTCCATCGACGCCGAGGTCTACGTCTGGCCCGGTGAACCGCTGGAAAACGTGCGCAGC CGCATCGAAACCGCGCTCACCGATTTCTTTTCCTTTGACCAAGTCTCCTTCGGTCAGACCATTCACTTCTCCGACCTGGT GGCGCTGATCGATGGCGTGCGTGGCGTCAGCCACATGCATCTCTACGCGCCCCAGCAGGACATCGAGCTGCGCCACGGCG AAATCCCGGTTCTCGGCAGTGTCAACCTCGATCTGCGGAGGGCCGGTTGA
Upstream 100 bases:
>100_bases AGGCATCCCGCCTCCGACACATCCAGGCCCCTTCCGGTAAGTAACCGGCGTGGCGAGAGCATCAGGCGCTCTCGCATAAC CGCCGAAAACCGGAGAGACC
Downstream 100 bases:
>100_bases TGTCGGATTGGTTCAAGGACAATCTGCTCGGCCTGCTGCCGCCGCTTTACGAGCACAACGACGAGGCCGGTGACCTGCGC ACCTTTCTGAACCTTCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MGRASIGYINKDYESIRQELLAKIPQLTDRWTDFNHSDLGVVLLDLFCGVGDMLAYYLDAQAAEAFLPTARQRQNVINLC KLIGYRLDSPVASTTTLRFRLSAPLGKDLTIPAGTACRALLSDGEADFETVEDGLLPRGLLSVDIPARQGVRRTETFTST GLPFQRIRLTGDVIAQGTITVTVGDDAWSEVDHFQDSLADSRHFMADLDALDISTLIFGDGQSGAVPAQGSAIAVSYLQT IGDQGNLGPNRITQLLSPVYLNGGQVSLTATNPVPATGGASREALEHARRQAPAELRSLWKAVTLEDYQALAEGYPGVAK AKVLDTNACQNIRYYNVQLAIAPNGGGMPSALLKRDLAEFLERRKVITVEINLFDPIYRPVSIDAEVYVWPGEPLENVRS RIETALTDFFSFDQVSFGQTIHFSDLVALIDGVRGVSHMHLYAPQQDIELRHGEIPVLGSVNLDLRRAG
Sequences:
>Translated_469_residues MGRASIGYINKDYESIRQELLAKIPQLTDRWTDFNHSDLGVVLLDLFCGVGDMLAYYLDAQAAEAFLPTARQRQNVINLC KLIGYRLDSPVASTTTLRFRLSAPLGKDLTIPAGTACRALLSDGEADFETVEDGLLPRGLLSVDIPARQGVRRTETFTST GLPFQRIRLTGDVIAQGTITVTVGDDAWSEVDHFQDSLADSRHFMADLDALDISTLIFGDGQSGAVPAQGSAIAVSYLQT IGDQGNLGPNRITQLLSPVYLNGGQVSLTATNPVPATGGASREALEHARRQAPAELRSLWKAVTLEDYQALAEGYPGVAK AKVLDTNACQNIRYYNVQLAIAPNGGGMPSALLKRDLAEFLERRKVITVEINLFDPIYRPVSIDAEVYVWPGEPLENVRS RIETALTDFFSFDQVSFGQTIHFSDLVALIDGVRGVSHMHLYAPQQDIELRHGEIPVLGSVNLDLRRAG >Mature_468_residues GRASIGYINKDYESIRQELLAKIPQLTDRWTDFNHSDLGVVLLDLFCGVGDMLAYYLDAQAAEAFLPTARQRQNVINLCK LIGYRLDSPVASTTTLRFRLSAPLGKDLTIPAGTACRALLSDGEADFETVEDGLLPRGLLSVDIPARQGVRRTETFTSTG LPFQRIRLTGDVIAQGTITVTVGDDAWSEVDHFQDSLADSRHFMADLDALDISTLIFGDGQSGAVPAQGSAIAVSYLQTI GDQGNLGPNRITQLLSPVYLNGGQVSLTATNPVPATGGASREALEHARRQAPAELRSLWKAVTLEDYQALAEGYPGVAKA KVLDTNACQNIRYYNVQLAIAPNGGGMPSALLKRDLAEFLERRKVITVEINLFDPIYRPVSIDAEVYVWPGEPLENVRSR IETALTDFFSFDQVSFGQTIHFSDLVALIDGVRGVSHMHLYAPQQDIELRHGEIPVLGSVNLDLRRAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51157; Mature: 51025
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRASIGYINKDYESIRQELLAKIPQLTDRWTDFNHSDLGVVLLDLFCGVGDMLAYYLDA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHH QAAEAFLPTARQRQNVINLCKLIGYRLDSPVASTTTLRFRLSAPLGKDLTIPAGTACRAL HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH LSDGEADFETVEDGLLPRGLLSVDIPARQGVRRTETFTSTGLPFQRIRLTGDVIAQGTIT HCCCCCCHHHHHHCCCCCCCEEEECCHHCCCCHHHHHHCCCCCCEEEEECCCEEECCEEE VTVGDDAWSEVDHFQDSLADSRHFMADLDALDISTLIFGDGQSGAVPAQGSAIAVSYLQT EEECCHHHHHHHHHHHHHHHHHHHHHHCCHHCEEEEEEECCCCCCCCCCCCHHHHHHHHH IGDQGNLGPNRITQLLSPVYLNGGQVSLTATNPVPATGGASREALEHARRQAPAELRSLW HCCCCCCCHHHHHHHHHHHEECCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHH KAVTLEDYQALAEGYPGVAKAKVLDTNACQNIRYYNVQLAIAPNGGGMPSALLKRDLAEF HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHH LERRKVITVEINLFDPIYRPVSIDAEVYVWPGEPLENVRSRIETALTDFFSFDQVSFGQT HHCCCEEEEEEEECCCCCCCEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCE IHFSDLVALIDGVRGVSHMHLYAPQQDIELRHGEIPVLGSVNLDLRRAG ECHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEECCCCEEECCC >Mature Secondary Structure GRASIGYINKDYESIRQELLAKIPQLTDRWTDFNHSDLGVVLLDLFCGVGDMLAYYLDA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHH QAAEAFLPTARQRQNVINLCKLIGYRLDSPVASTTTLRFRLSAPLGKDLTIPAGTACRAL HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH LSDGEADFETVEDGLLPRGLLSVDIPARQGVRRTETFTSTGLPFQRIRLTGDVIAQGTIT HCCCCCCHHHHHHCCCCCCCEEEECCHHCCCCHHHHHHCCCCCCEEEEECCCEEECCEEE VTVGDDAWSEVDHFQDSLADSRHFMADLDALDISTLIFGDGQSGAVPAQGSAIAVSYLQT EEECCHHHHHHHHHHHHHHHHHHHHHHCCHHCEEEEEEECCCCCCCCCCCCHHHHHHHHH IGDQGNLGPNRITQLLSPVYLNGGQVSLTATNPVPATGGASREALEHARRQAPAELRSLW HCCCCCCCHHHHHHHHHHHEECCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHH KAVTLEDYQALAEGYPGVAKAKVLDTNACQNIRYYNVQLAIAPNGGGMPSALLKRDLAEF HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHH LERRKVITVEINLFDPIYRPVSIDAEVYVWPGEPLENVRSRIETALTDFFSFDQVSFGQT HHCCCEEEEEEEECCCCCCCEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCE IHFSDLVALIDGVRGVSHMHLYAPQQDIELRHGEIPVLGSVNLDLRRAG ECHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA