| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78356916
Identifier: 78356916
GI number: 78356916
Start: 1924422
End: 1925996
Strand: Reverse
Name: 78356916
Synonym: Dde_1873
Alternate gene names: NA
Gene position: 1925996-1924422 (Counterclockwise)
Preceding gene: 78356917
Following gene: 78356915
Centisome position: 51.63
GC content: 65.33
Gene sequence:
>1575_bases ATGTCGGATTGGTTCAAGGACAATCTGCTCGGCCTGCTGCCGCCGCTTTACGAGCACAACGACGAGGCCGGTGACCTGCG CACCTTTCTGAACCTTCCCGCCGGAACGCTCGACGAGCTCAAGCAGGCCATCGACGACTTCCCGACCATCTTCGACGTCG ATCATTGCGACGAACGCTTCTTGCCGCTGCTGGCGAGACTGGTCGGCCTCGAAGTGGACGGCACCTGTTCGCCAGACTGC CAGCGCCGCCGCGTGCGGGAGGCGGTCGAAATCTATCGCCGCAAGGGCACTATCCCGGCCATCGAACGCGACTTTGACGC GCTCGGTTGGCAGGGGGAACTGCAGGAGACCTTCCGCTCGGCTCTGCGTCTCAATGCCCGCTCAAAACTCAGCAGCGCCA AGCTGCCCGGGCTGGTGTTCAGCCTCGGCGTGTTTCGCGTGCTGTGCCTCAACCAGACCGAGGGGCTGCGCGACGCCCTG GTGTTTCACCACCCGGCGGGCACGCGCTGTTTCTGGCTCCAGTTCCTCCTGGAATGGATCGATGGCGGCGCGATGCTCGA CTTCGGGCACGCCAACGCCGTGCGCCGGATCGTGCTGGCGTTTCTCGACGAAACCTTCGTCCTCGGACGTTCCTCGCTCG GTTCCTGTCGTCACCTGACCAACAAGCAGAGGGCCTGGGAGCTGCTGCAGCTCACCAGCACCACGGAGATGATTCCGGAG ATCGACCGGGCCGCCGTGAAGGTCTCCCGTTTTCACGGCCGCCAGAACCGGATGCGCCTGAACCACAAGGCCCTCAACGA CTGGCGGCTCCCGTACACCCGCATCGGCGATGACCGGGTTTCCTTCTGCACGCCCATCTACACCGGCCGCGACTTCGAAG GGGATGTGCTGGAAAGCGGCTTGGGGCTGGGCGAGAGCCATCTCAACCGCAAGCCGCTGACCCATGGCGAGACCGCGCTG CGCTACTGCTTCCGGCAGAAGGATTTTTTTTTCGACACGCAGGCGGAACCGGTCGAGCGGGCGGAGGCCAAGTACGACCT GCGCCTGCCCTTGGAATCTCGACACCGTCTCTGCTTCCAGCTCGGCCGCGCCAGGCTCAACGCTGGTCTCGACCTCACCG CCAACCAGGGCGGCATCAGCAATCTGCTGCTCGCCTCCACCGCTGGCTGCGACGCGGACGTCACCCTGGCCGTCGACCGG ATCGACCGATGGCGGCGGAGAGGGCCTGTGTTCCGGCTCAACGCGAACACCCTGAACACCCGGTATCTGAGCAATGCGAA TCTGACCGGCGAACGGGCCTCGCTTGAAGTCTACGTGGACACGGGCTCTCTCCAGCGCCATCGGGTCGAGACCATGAAGC TGGGCGCGAGCCCGCTCAATACCACCGGCCTGCGCCTTTCCGTGGATCGGACCCGCCCCATGCGCGTCAGCCGCATGCGC CTCAACCAGGCCGGATTCCGCTGGTCGCGGCCTTCCTACCGCTGGCTGTTCCGTCAGCAGGATCTGCACGCGCCGACGCA GGCCGGGTTCGAGACCGCCACCAACAACTATCGCGCCACCCAGTGGCCCACCTGA
Upstream 100 bases:
>100_bases GCCACATGCATCTCTACGCGCCCCAGCAGGACATCGAGCTGCGCCACGGCGAAATCCCGGTTCTCGGCAGTGTCAACCTC GATCTGCGGAGGGCCGGTTG
Downstream 100 bases:
>100_bases AGGAGAACCCATGGCGATACATCTCTATCTTGACGAAGGGCTGACCCAGCAGATTTCCGAGGGAGATTTCAGCCGCCCCG AGGCCGAGAGCTACAACGGC
Product: Phage tail protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 524; Mature: 523
Protein sequence:
>524_residues MSDWFKDNLLGLLPPLYEHNDEAGDLRTFLNLPAGTLDELKQAIDDFPTIFDVDHCDERFLPLLARLVGLEVDGTCSPDC QRRRVREAVEIYRRKGTIPAIERDFDALGWQGELQETFRSALRLNARSKLSSAKLPGLVFSLGVFRVLCLNQTEGLRDAL VFHHPAGTRCFWLQFLLEWIDGGAMLDFGHANAVRRIVLAFLDETFVLGRSSLGSCRHLTNKQRAWELLQLTSTTEMIPE IDRAAVKVSRFHGRQNRMRLNHKALNDWRLPYTRIGDDRVSFCTPIYTGRDFEGDVLESGLGLGESHLNRKPLTHGETAL RYCFRQKDFFFDTQAEPVERAEAKYDLRLPLESRHRLCFQLGRARLNAGLDLTANQGGISNLLLASTAGCDADVTLAVDR IDRWRRRGPVFRLNANTLNTRYLSNANLTGERASLEVYVDTGSLQRHRVETMKLGASPLNTTGLRLSVDRTRPMRVSRMR LNQAGFRWSRPSYRWLFRQQDLHAPTQAGFETATNNYRATQWPT
Sequences:
>Translated_524_residues MSDWFKDNLLGLLPPLYEHNDEAGDLRTFLNLPAGTLDELKQAIDDFPTIFDVDHCDERFLPLLARLVGLEVDGTCSPDC QRRRVREAVEIYRRKGTIPAIERDFDALGWQGELQETFRSALRLNARSKLSSAKLPGLVFSLGVFRVLCLNQTEGLRDAL VFHHPAGTRCFWLQFLLEWIDGGAMLDFGHANAVRRIVLAFLDETFVLGRSSLGSCRHLTNKQRAWELLQLTSTTEMIPE IDRAAVKVSRFHGRQNRMRLNHKALNDWRLPYTRIGDDRVSFCTPIYTGRDFEGDVLESGLGLGESHLNRKPLTHGETAL RYCFRQKDFFFDTQAEPVERAEAKYDLRLPLESRHRLCFQLGRARLNAGLDLTANQGGISNLLLASTAGCDADVTLAVDR IDRWRRRGPVFRLNANTLNTRYLSNANLTGERASLEVYVDTGSLQRHRVETMKLGASPLNTTGLRLSVDRTRPMRVSRMR LNQAGFRWSRPSYRWLFRQQDLHAPTQAGFETATNNYRATQWPT >Mature_523_residues SDWFKDNLLGLLPPLYEHNDEAGDLRTFLNLPAGTLDELKQAIDDFPTIFDVDHCDERFLPLLARLVGLEVDGTCSPDCQ RRRVREAVEIYRRKGTIPAIERDFDALGWQGELQETFRSALRLNARSKLSSAKLPGLVFSLGVFRVLCLNQTEGLRDALV FHHPAGTRCFWLQFLLEWIDGGAMLDFGHANAVRRIVLAFLDETFVLGRSSLGSCRHLTNKQRAWELLQLTSTTEMIPEI DRAAVKVSRFHGRQNRMRLNHKALNDWRLPYTRIGDDRVSFCTPIYTGRDFEGDVLESGLGLGESHLNRKPLTHGETALR YCFRQKDFFFDTQAEPVERAEAKYDLRLPLESRHRLCFQLGRARLNAGLDLTANQGGISNLLLASTAGCDADVTLAVDRI DRWRRRGPVFRLNANTLNTRYLSNANLTGERASLEVYVDTGSLQRHRVETMKLGASPLNTTGLRLSVDRTRPMRVSRMRL NQAGFRWSRPSYRWLFRQQDLHAPTQAGFETATNNYRATQWPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59837; Mature: 59706
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDWFKDNLLGLLPPLYEHNDEAGDLRTFLNLPAGTLDELKQAIDDFPTIFDVDHCDERF CCCHHHHCHHHHCCCHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCEEECHHCHHHH LPLLARLVGLEVDGTCSPDCQRRRVREAVEIYRRKGTIPAIERDFDALGWQGELQETFRS HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCHHHCCCCHHHHHHHHH ALRLNARSKLSSAKLPGLVFSLGVFRVLCLNQTEGLRDALVFHHPAGTRCFWLQFLLEWI HHHHCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCHHHHHHHHHHHH DGGAMLDFGHANAVRRIVLAFLDETFVLGRSSLGSCRHLTNKQRAWELLQLTSTTEMIPE CCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IDRAAVKVSRFHGRQNRMRLNHKALNDWRLPYTRIGDDRVSFCTPIYTGRDFEGDVLESG HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEECCCCCHHHCCCCCCCCCCCCHHHHHC LGLGESHLNRKPLTHGETALRYCFRQKDFFFDTQAEPVERAEAKYDLRLPLESRHRLCFQ CCCCHHHCCCCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHCCCEEEECCHHHHHHHHHH LGRARLNAGLDLTANQGGISNLLLASTAGCDADVTLAVDRIDRWRRRGPVFRLNANTLNT HHHHHHCCCCEEECCCCCCHHHHHEECCCCCCCEEEEHHHHHHHHHCCCEEEEECCCCCE RYLSNANLTGERASLEVYVDTGSLQRHRVETMKLGASPLNTTGLRLSVDRTRPMRVSRMR EEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHH LNQAGFRWSRPSYRWLFRQQDLHAPTQAGFETATNNYRATQWPT HHHCCCCCCCCCHHHHHHHCCCCCCHHHCCHHHCCCEEECCCCC >Mature Secondary Structure SDWFKDNLLGLLPPLYEHNDEAGDLRTFLNLPAGTLDELKQAIDDFPTIFDVDHCDERF CCHHHHCHHHHCCCHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCEEECHHCHHHH LPLLARLVGLEVDGTCSPDCQRRRVREAVEIYRRKGTIPAIERDFDALGWQGELQETFRS HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCHHHCCCCHHHHHHHHH ALRLNARSKLSSAKLPGLVFSLGVFRVLCLNQTEGLRDALVFHHPAGTRCFWLQFLLEWI HHHHCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCHHHHHHHHHHHH DGGAMLDFGHANAVRRIVLAFLDETFVLGRSSLGSCRHLTNKQRAWELLQLTSTTEMIPE CCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IDRAAVKVSRFHGRQNRMRLNHKALNDWRLPYTRIGDDRVSFCTPIYTGRDFEGDVLESG HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEECCCCCHHHCCCCCCCCCCCCHHHHHC LGLGESHLNRKPLTHGETALRYCFRQKDFFFDTQAEPVERAEAKYDLRLPLESRHRLCFQ CCCCHHHCCCCCCCCHHHHHHHHHHCCCCEECCCCCHHHHHCCCEEEECCHHHHHHHHHH LGRARLNAGLDLTANQGGISNLLLASTAGCDADVTLAVDRIDRWRRRGPVFRLNANTLNT HHHHHHCCCCEEECCCCCCHHHHHEECCCCCCCEEEEHHHHHHHHHCCCEEEEECCCCCE RYLSNANLTGERASLEVYVDTGSLQRHRVETMKLGASPLNTTGLRLSVDRTRPMRVSRMR EEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHH LNQAGFRWSRPSYRWLFRQQDLHAPTQAGFETATNNYRATQWPT HHHCCCCCCCCCHHHHHHHCCCCCCHHHCCHHHCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA