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The map label for this gene is ychE [C]

Identifier: 78356883

GI number: 78356883

Start: 1891165

End: 1891767

Strand: Reverse

Name: ychE [C]

Synonym: Dde_1840

Alternate gene names: 78356883

Gene position: 1891767-1891165 (Counterclockwise)

Preceding gene: 78356884

Following gene: 78356880

Centisome position: 50.71

GC content: 50.91

Gene sequence:

>603_bases
ATGCCGGATGCCGTGAACCTGTTTGTGTCCACTGCCATCAAGTTTTTCTTTCTGCTCACTCCTTTTTTCGGGCTGACCAT
GTTTCTGGCCATGACGGAACACATGGACAGGAAACAGCAACGGAAAATTGCCGTGCGGTGCATTGTTTCCGTAGTAATCA
TTTCAATGGTTCTTTTTCATTTCGGTGATATCATTTTTTCTCTGTTCGGCATCACGCTTGATGCTTTCAGAATCGGCGCC
GGAGCCCTGCTTTTTCTTTCCGCGGTCAATCTTATCCGTGGTCCCAGCGGGACTGTGGGAGCCAGTGCAGAAGGTGATAT
CAGCGTTGTGCCCCTTGCCATGCCCATAGTGGTCGGTCCGGCGACCATAGGTACCCTGCTGGTGATGGGAGCAACCATGC
ACGGCACCACAACGCGTCTTATAGGCAGTTTTGCGCTGGTTACGGCCATTCTGGCACTGGGCATTCTTTTTTTTATGGCT
CCGGCTCTTGAACGCATTCTCGGGCGCACCGGACTTTCCATCATGACCAAAATAACCGGACTGATCCTCTCTGCTCTTTC
CGCCCAGATAATTTTTACCGGGGTACGGAATTTTCTTATGTAG

Upstream 100 bases:

>100_bases
GTCATGGTCTGCTCTTTCCGTTCACAAAGAGTAACCTTTCAAAGCTTAACTAGGCACAAAAGCTGCGGGTTACCGCAGCT
TTTTGCGTTATGGAGTCTTT

Downstream 100 bases:

>100_bases
AGCTTCGGTGTCAACCGGCATAGTCTGCAAACAGAAAGGCCCGCCGGATTGCCGGCGGGCCTTTCTGTCTGTCCGATGAT
AAGAGGGCTACTGGTCTGAG

Product: multiple antibiotic resistance (MarC)-like proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MPDAVNLFVSTAIKFFFLLTPFFGLTMFLAMTEHMDRKQQRKIAVRCIVSVVIISMVLFHFGDIIFSLFGITLDAFRIGA
GALLFLSAVNLIRGPSGTVGASAEGDISVVPLAMPIVVGPATIGTLLVMGATMHGTTTRLIGSFALVTAILALGILFFMA
PALERILGRTGLSIMTKITGLILSALSAQIIFTGVRNFLM

Sequences:

>Translated_200_residues
MPDAVNLFVSTAIKFFFLLTPFFGLTMFLAMTEHMDRKQQRKIAVRCIVSVVIISMVLFHFGDIIFSLFGITLDAFRIGA
GALLFLSAVNLIRGPSGTVGASAEGDISVVPLAMPIVVGPATIGTLLVMGATMHGTTTRLIGSFALVTAILALGILFFMA
PALERILGRTGLSIMTKITGLILSALSAQIIFTGVRNFLM
>Mature_199_residues
PDAVNLFVSTAIKFFFLLTPFFGLTMFLAMTEHMDRKQQRKIAVRCIVSVVIISMVLFHFGDIIFSLFGITLDAFRIGAG
ALLFLSAVNLIRGPSGTVGASAEGDISVVPLAMPIVVGPATIGTLLVMGATMHGTTTRLIGSFALVTAILALGILFFMAP
ALERILGRTGLSIMTKITGLILSALSAQIIFTGVRNFLM

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=194, Percent_Identity=34.5360824742268, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789842, Length=200, Percent_Identity=24.5, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI1787809, Length=199, Percent_Identity=23.1155778894472, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21313; Mature: 21182

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDAVNLFVSTAIKFFFLLTPFFGLTMFLAMTEHMDRKQQRKIAVRCIVSVVIISMVLFH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGDIIFSLFGITLDAFRIGAGALLFLSAVNLIRGPSGTVGASAEGDISVVPLAMPIVVGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHCCH
ATIGTLLVMGATMHGTTTRLIGSFALVTAILALGILFFMAPALERILGRTGLSIMTKITG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LILSALSAQIIFTGVRNFLM
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PDAVNLFVSTAIKFFFLLTPFFGLTMFLAMTEHMDRKQQRKIAVRCIVSVVIISMVLFH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGDIIFSLFGITLDAFRIGAGALLFLSAVNLIRGPSGTVGASAEGDISVVPLAMPIVVGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHCCH
ATIGTLLVMGATMHGTTTRLIGSFALVTAILALGILFFMAPALERILGRTGLSIMTKITG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LILSALSAQIIFTGVRNFLM
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]