| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356880
Identifier: 78356880
GI number: 78356880
Start: 1887894
End: 1888898
Strand: Reverse
Name: 78356880
Synonym: Dde_1837
Alternate gene names: NA
Gene position: 1888898-1887894 (Counterclockwise)
Preceding gene: 78356883
Following gene: 78356877
Centisome position: 50.64
GC content: 58.81
Gene sequence:
>1005_bases ATGCTCTGGGGTTGGGTACATCACCTGCGCCAGAGCGTCCTGTCGCGCAGAGGGTGCCGGAATCAGTGGCCGGCAGGCTG CTTTCCACCTCATCATAGCTTCATGTTTTCTCTGTTGCTACTGTTACTCGGCCTGCTGGCCGGACTGGCTCTGCTGGTAG GCATGGCCTCGTATCTGTTGTATTCTTACGAGGTGGCCAGTACCTCGCGCGGGGCTTCCGCGCGCCGCCCCCCCATTCCC CGGGCCATAGTCCGCGGCATTGCCATGAGCATGACCGGACAGATTCTGGTGACACTTACCTATCCGCTGGGATTGTGGGA ACGGTTGTGGTTTTCTCCTGCCGGCGGACATTCCGTGACAGATGACAATCCTCCCCTGCTGCTTGTGCATGGTCTGTACC ACAATGCTTCAGCCTGGATGGCCTACCGCAAATGGTTGCGCGAGGCAGGGTTCACCAACGTTTACGCTTTTTCCTACTCA AGCTGGCGTACTGACTTTGACACGCTTGTGCTCGAACTTGATGACCGCATTGCAAAGCTTGAAAAGGCTTTTCCCGGCAC GGCACCGGTGCTTGTGGGGCATTCGCTGGGCGGGCTGATCATCAGAGGGTGGATTAAGCGGTTCGGCGGGTGCCGCAGGG TGCGGGCTGTGCTGACATTGGGCACTCCCCATCAGGGCAGCAAACTCGCCCGTCTGGGGTTCGGGCGTCTGTGCCGCAGT CTGGCGTTCAGAGGCCCCCTTGTACGCGCTCTGGAAAAGGACGAACCTGCTGTAAGAGTTCCGGCTGTGGCACTGTATTC CGGAATCGACAACATGGTGCTGCCCGTAGAGGGGCTGAAACCGCGCGCGACGGGATGGCGCCTGCATGAGGTGCATCCGG TGAGCCATATTTTCATGCTCTACAGTAAAAAAACGTTCGATGAATTTCACTGCAGGCTGAAAGAGACTCTTGCGGGGGGC TGTCCGGTTACTCCGCAGACTGGCCGTGCCGGTGATACAGTCTGA
Upstream 100 bases:
>100_bases CAGACACAGATATGGCAATCCATACTGGATCTTTCCGGTATTTCGGCTTCTGTTTCCAGTTCCATCCAGCGTACGCTGGG TAAAAAACATCTGGAGATGG
Downstream 100 bases:
>100_bases CATAGTCCTGTGCCATACGCCGCGCAGTAAAGCGGTTCAACCAGCAGGTTCTTGCAGCTTCTCCCATTTTTTTCAGTCCG GTCCGGTCTGCCGTCAGGTG
Product: alpha/beta hydrolase fold-like protein
Products: NA
Alternate protein names: PGAP1 Family Protein; Lipase Transmembrane Protein; Secreted Lipase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold-Like Protein; Pgap1 Family Protein; Lipase Superfamily
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MLWGWVHHLRQSVLSRRGCRNQWPAGCFPPHHSFMFSLLLLLLGLLAGLALLVGMASYLLYSYEVASTSRGASARRPPIP RAIVRGIAMSMTGQILVTLTYPLGLWERLWFSPAGGHSVTDDNPPLLLVHGLYHNASAWMAYRKWLREAGFTNVYAFSYS SWRTDFDTLVLELDDRIAKLEKAFPGTAPVLVGHSLGGLIIRGWIKRFGGCRRVRAVLTLGTPHQGSKLARLGFGRLCRS LAFRGPLVRALEKDEPAVRVPAVALYSGIDNMVLPVEGLKPRATGWRLHEVHPVSHIFMLYSKKTFDEFHCRLKETLAGG CPVTPQTGRAGDTV
Sequences:
>Translated_334_residues MLWGWVHHLRQSVLSRRGCRNQWPAGCFPPHHSFMFSLLLLLLGLLAGLALLVGMASYLLYSYEVASTSRGASARRPPIP RAIVRGIAMSMTGQILVTLTYPLGLWERLWFSPAGGHSVTDDNPPLLLVHGLYHNASAWMAYRKWLREAGFTNVYAFSYS SWRTDFDTLVLELDDRIAKLEKAFPGTAPVLVGHSLGGLIIRGWIKRFGGCRRVRAVLTLGTPHQGSKLARLGFGRLCRS LAFRGPLVRALEKDEPAVRVPAVALYSGIDNMVLPVEGLKPRATGWRLHEVHPVSHIFMLYSKKTFDEFHCRLKETLAGG CPVTPQTGRAGDTV >Mature_334_residues MLWGWVHHLRQSVLSRRGCRNQWPAGCFPPHHSFMFSLLLLLLGLLAGLALLVGMASYLLYSYEVASTSRGASARRPPIP RAIVRGIAMSMTGQILVTLTYPLGLWERLWFSPAGGHSVTDDNPPLLLVHGLYHNASAWMAYRKWLREAGFTNVYAFSYS SWRTDFDTLVLELDDRIAKLEKAFPGTAPVLVGHSLGGLIIRGWIKRFGGCRRVRAVLTLGTPHQGSKLARLGFGRLCRS LAFRGPLVRALEKDEPAVRVPAVALYSGIDNMVLPVEGLKPRATGWRLHEVHPVSHIFMLYSKKTFDEFHCRLKETLAGG CPVTPQTGRAGDTV
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37107; Mature: 37107
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWGWVHHLRQSVLSRRGCRNQWPAGCFPPHHSFMFSLLLLLLGLLAGLALLVGMASYLL CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSYEVASTSRGASARRPPIPRAIVRGIAMSMTGQILVTLTYPLGLWERLWFSPAGGHSVT HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCCCCCCCCCC DDNPPLLLVHGLYHNASAWMAYRKWLREAGFTNVYAFSYSSWRTDFDTLVLELDDRIAKL CCCCCEEEEECCHHCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH EKAFPGTAPVLVGHSLGGLIIRGWIKRFGGCRRVRAVLTLGTPHQGSKLARLGFGRLCRS HHHCCCCCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHH LAFRGPLVRALEKDEPAVRVPAVALYSGIDNMVLPVEGLKPRATGWRLHEVHPVSHIFML HHHCCHHHHHHCCCCCCEECCHHHHHHCCCCCEEECCCCCCCCCCCEEEECCHHHHHHHH YSKKTFDEFHCRLKETLAGGCPVTPQTGRAGDTV HHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLWGWVHHLRQSVLSRRGCRNQWPAGCFPPHHSFMFSLLLLLLGLLAGLALLVGMASYLL CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSYEVASTSRGASARRPPIPRAIVRGIAMSMTGQILVTLTYPLGLWERLWFSPAGGHSVT HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCCCCCCCCCC DDNPPLLLVHGLYHNASAWMAYRKWLREAGFTNVYAFSYSSWRTDFDTLVLELDDRIAKL CCCCCEEEEECCHHCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH EKAFPGTAPVLVGHSLGGLIIRGWIKRFGGCRRVRAVLTLGTPHQGSKLARLGFGRLCRS HHHCCCCCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHH LAFRGPLVRALEKDEPAVRVPAVALYSGIDNMVLPVEGLKPRATGWRLHEVHPVSHIFML HHHCCHHHHHHCCCCCCEECCHHHHHHCCCCCEEECCCCCCCCCCCEEEECCHHHHHHHH YSKKTFDEFHCRLKETLAGGCPVTPQTGRAGDTV HHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA