Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78356868

Identifier: 78356868

GI number: 78356868

Start: 1874675

End: 1874959

Strand: Direct

Name: 78356868

Synonym: Dde_1825

Alternate gene names: NA

Gene position: 1874675-1874959 (Clockwise)

Preceding gene: 78356867

Following gene: 78356869

Centisome position: 50.26

GC content: 49.82

Gene sequence:

>285_bases
ATGAGCGCCGAACACCACCATATTGTCAGTTTCAGGCAAAACACCATCATCTGGCTTGTCCTGCTCGTTTTCACTGCCAT
CACGGTTGCCGCGTCCCGCTTTGATTTCGGATTCCTGAACATCGTCGTTGCCCTTGGCATAGCCACCTGCAAAGCAGGTC
TGGTGACGCTTTATTTCATGCACCTGCGGTATGAGGGCAATCTTATCCGCCTGATGGTTTTCATTGCCTTTGCAATTCTT
GCCATCGCCATAGGATTCACATTTTTTGACGTAGCCTACAGGTGA

Upstream 100 bases:

>100_bases
ATTTCATCTTTCTCGAAAACAGCGGCCTGTACTGGCATCTTGTTGATCTGGTATGGATTTACCTTTTTCCGCTTTTTTAC
CTCATTGTGTAGGAGAGATC

Downstream 100 bases:

>100_bases
GGTGCCTATGTTTCCGCAATCACTCAGCCCTGTGCAACAGGTTGATCTGGCTTTCTATGTCATCTTCGGCATTTCAATAG
CAATTCTGGTATGCATAACC

Product: Caa(3)-type oxidase subunit IV

Products: ferricytochrome c; H2O

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MSAEHHHIVSFRQNTIIWLVLLVFTAITVAASRFDFGFLNIVVALGIATCKAGLVTLYFMHLRYEGNLIRLMVFIAFAIL
AIAIGFTFFDVAYR

Sequences:

>Translated_94_residues
MSAEHHHIVSFRQNTIIWLVLLVFTAITVAASRFDFGFLNIVVALGIATCKAGLVTLYFMHLRYEGNLIRLMVFIAFAIL
AIAIGFTFFDVAYR
>Mature_93_residues
SAEHHHIVSFRQNTIIWLVLLVFTAITVAASRFDFGFLNIVVALGIATCKAGLVTLYFMHLRYEGNLIRLMVFIAFAILA
IAIGFTFFDVAYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 10614; Mature: 10483

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEHHHIVSFRQNTIIWLVLLVFTAITVAASRFDFGFLNIVVALGIATCKAGLVTLYFM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
HLRYEGNLIRLMVFIAFAILAIAIGFTFFDVAYR
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAEHHHIVSFRQNTIIWLVLLVFTAITVAASRFDFGFLNIVVALGIATCKAGLVTLYFM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
HLRYEGNLIRLMVFIAFAILAIAIGFTFFDVAYR
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA