| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356828
Identifier: 78356828
GI number: 78356828
Start: 1836496
End: 1838076
Strand: Direct
Name: 78356828
Synonym: Dde_1785
Alternate gene names: NA
Gene position: 1836496-1838076 (Clockwise)
Preceding gene: 78356827
Following gene: 78356829
Centisome position: 49.23
GC content: 56.74
Gene sequence:
>1581_bases ATGGGCATCTGTCTGCGTTTTCTGCTGTCCGGAGTTATTCTGCTTTTTGCCTGCTCCCTTTTGCCGCTCAAAGCTTCGGC AGCAGCCGCTCAGGGAAGTTTTGATCCTGCTCCGCTGCGCGCACAGGCCGTCAATCTGTATCAGCAGGGCAAAATTCTTG AAAGTCTTGAGCTATGGCACGCCATCTACCGTCTGGGGGACTCGGCGGCCGTCAGGTCGGAAGCGCTTGTCATGCTGGGC GATATCAACGCCATGTTTCTGGACCGCAAAGACAGAGCCATCGATCTTTACGAAAAAGGCATCGCCCTTGGCGGTCTGCC TCATGTCATTGCAAGGGCTTGGTACAATCTGGCCATGCTCCGGTACGACAGGGGAGAGTACACCGCTGCCCGTCTGGCCT TTGAAGGCTATCTGAAGCGTTTTCCCAACGGTCCCAAGGCCGGAGGAAGCCGCCACATGCTCACCCGCCTGCAAAAGCAT TCCTTTGCCGGTAAAGCCGATGTTCCTCCTGCGGAAATCACCCCCCGCCCCATACCGCGCAGAGAGCCCAATATCAGGGT TGCCCTGAAGCATGCCTCTGAAATCATAGTCACTCCTCCTTCCGGCACGGTGGCCGGTTATGAAGGCAGAAGAGCCAGAG TCATGGCCGGAAAGCTGCGCATAACAGTACAGGGAGACGATATATGCCTCAACGGCCGTCCCATGGGGGCTTCCGTCAGC CTGCTGGCACGCGGCGGCACCTTTGCCATGGGCGATGCCCGTTATGCCGGCAGCATGAGCTTTCATGTGCGCGAAGGAAA GGTGCTGGCAGTGAACACATTGCCGCTGGAGCGGTACCTGGAAGGCGTTGTTCCGTGCGAAATGCCTGACTCTTTCAGGC CGCAGGCACTCCGTGCTCAGGCAGTGGCAGCGCGAACGCATGCCCTGTACATGCTCTTGCGCAGCAGCGAACGCCCATAT GACGTATGGTCAACAACTGCATCACAGGTGTACGGAGGCGTCATTTCCGGCGGGCGGCAGGCTGCGGAAGCTGTCAAAGC CACAAGAGGACGCATCCTTGTATATAACGGGGCAATCGCGCTGGCATTTTATCATTCTCACAGCGGCGGTGTGCTGGAAG ATGATTCTGCCGTCTGGGATGTTGACATGCCGTACTATAGAGTGCAGGCAGACCCTGTAAGCAACAGCATAAAAGATATG CAGTGGAGCTGCAGCATCCCTCTGAGTGAATTGGCAATGCTGCTGCGCAGCAGAGGGTACCCCGTAAGGCAGGTCAGCGG TGTGGCTGTATCGCAGCGTTCTGCTTCCGGCAGGGTGCTCAGGGTGCGTATGGCCACAGACGGTGGCAATATTGAGATGA ATTCCAATCCGTTCAGATTGCTGGTGGGTGCCACAAAGATGAAAAGCACACTATGCAGTATCGGCATAAGCGGTAAGACA ATTCTTTTCAGGGGAAGAGGGTACGGACACGGAGTGGGGATGAGCCAGTGGGGTGCGGAAGGCATGGCCCGGAAAGGGGC CGCTTATGAAGCAATTCTCAGGCAATACTATCCGCATACCACCGTGAGAGCTTTGTACTGA
Upstream 100 bases:
>100_bases TTACCTGGTTCCGCAGAGAACCGAATCTGCACTGGCTGGACGGTACGGATATGGCGGCCATGGAACGGCTGGTACACTCT GTGGCAGGCAGCACCGGCTG
Downstream 100 bases:
>100_bases TGACGCAGCTTCGGCACGACAGGTGAAAATAATGAAAAAAATGGCATTGCCGCTGCTTTGCGCAACGCTGCTTTGCGCAT GCTCCCCCGGCGAGGCAGTA
Product: sporulation protein and related proteins-like
Products: NA
Alternate protein names: H-34 [H]
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MGICLRFLLSGVILLFACSLLPLKASAAAAQGSFDPAPLRAQAVNLYQQGKILESLELWHAIYRLGDSAAVRSEALVMLG DINAMFLDRKDRAIDLYEKGIALGGLPHVIARAWYNLAMLRYDRGEYTAARLAFEGYLKRFPNGPKAGGSRHMLTRLQKH SFAGKADVPPAEITPRPIPRREPNIRVALKHASEIIVTPPSGTVAGYEGRRARVMAGKLRITVQGDDICLNGRPMGASVS LLARGGTFAMGDARYAGSMSFHVREGKVLAVNTLPLERYLEGVVPCEMPDSFRPQALRAQAVAARTHALYMLLRSSERPY DVWSTTASQVYGGVISGGRQAAEAVKATRGRILVYNGAIALAFYHSHSGGVLEDDSAVWDVDMPYYRVQADPVSNSIKDM QWSCSIPLSELAMLLRSRGYPVRQVSGVAVSQRSASGRVLRVRMATDGGNIEMNSNPFRLLVGATKMKSTLCSIGISGKT ILFRGRGYGHGVGMSQWGAEGMARKGAAYEAILRQYYPHTTVRALY
Sequences:
>Translated_526_residues MGICLRFLLSGVILLFACSLLPLKASAAAAQGSFDPAPLRAQAVNLYQQGKILESLELWHAIYRLGDSAAVRSEALVMLG DINAMFLDRKDRAIDLYEKGIALGGLPHVIARAWYNLAMLRYDRGEYTAARLAFEGYLKRFPNGPKAGGSRHMLTRLQKH SFAGKADVPPAEITPRPIPRREPNIRVALKHASEIIVTPPSGTVAGYEGRRARVMAGKLRITVQGDDICLNGRPMGASVS LLARGGTFAMGDARYAGSMSFHVREGKVLAVNTLPLERYLEGVVPCEMPDSFRPQALRAQAVAARTHALYMLLRSSERPY DVWSTTASQVYGGVISGGRQAAEAVKATRGRILVYNGAIALAFYHSHSGGVLEDDSAVWDVDMPYYRVQADPVSNSIKDM QWSCSIPLSELAMLLRSRGYPVRQVSGVAVSQRSASGRVLRVRMATDGGNIEMNSNPFRLLVGATKMKSTLCSIGISGKT ILFRGRGYGHGVGMSQWGAEGMARKGAAYEAILRQYYPHTTVRALY >Mature_525_residues GICLRFLLSGVILLFACSLLPLKASAAAAQGSFDPAPLRAQAVNLYQQGKILESLELWHAIYRLGDSAAVRSEALVMLGD INAMFLDRKDRAIDLYEKGIALGGLPHVIARAWYNLAMLRYDRGEYTAARLAFEGYLKRFPNGPKAGGSRHMLTRLQKHS FAGKADVPPAEITPRPIPRREPNIRVALKHASEIIVTPPSGTVAGYEGRRARVMAGKLRITVQGDDICLNGRPMGASVSL LARGGTFAMGDARYAGSMSFHVREGKVLAVNTLPLERYLEGVVPCEMPDSFRPQALRAQAVAARTHALYMLLRSSERPYD VWSTTASQVYGGVISGGRQAAEAVKATRGRILVYNGAIALAFYHSHSGGVLEDDSAVWDVDMPYYRVQADPVSNSIKDMQ WSCSIPLSELAMLLRSRGYPVRQVSGVAVSQRSASGRVLRVRMATDGGNIEMNSNPFRLLVGATKMKSTLCSIGISGKTI LFRGRGYGHGVGMSQWGAEGMARKGAAYEAILRQYYPHTTVRALY
Specific function: Might be involved in sporulation [H]
COG id: COG2385
COG function: function code D; Sporulation protein and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013486 - InterPro: IPR013693 [H]
Pfam domain/function: PF08486 SpoIID [H]
EC number: NA
Molecular weight: Translated: 57282; Mature: 57151
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGICLRFLLSGVILLFACSLLPLKASAAAAQGSFDPAPLRAQAVNLYQQGKILESLELWH CHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH AIYRLGDSAAVRSEALVMLGDINAMFLDRKDRAIDLYEKGIALGGLPHVIARAWYNLAML HHHHCCCCHHHCCCEEEEEECCCEEEECCCCCEEHHHHCCCCCCCHHHHHHHHHHHEEEE RYDRGEYTAARLAFEGYLKRFPNGPKAGGSRHMLTRLQKHSFAGKADVPPAEITPRPIPR EECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC REPNIRVALKHASEIIVTPPSGTVAGYEGRRARVMAGKLRITVQGDDICLNGRPMGASVS CCCCEEEEEECCCEEEEECCCCCEECCCCCEEEEEEEEEEEEEECCEEEECCCCCCCCEE LLARGGTFAMGDARYAGSMSFHVREGKVLAVNTLPLERYLEGVVPCEMPDSFRPQALRAQ EEECCCEEEECCCCCCCCEEEEEECCCEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHH AVAARTHALYMLLRSSERPYDVWSTTASQVYGGVISGGRQAAEAVKATRGRILVYNGAIA HHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECEEE LAFYHSHSGGVLEDDSAVWDVDMPYYRVQADPVSNSIKDMQWSCSIPLSELAMLLRSRGY EEEEECCCCCEEECCCCEEECCCCEEEEECCCCCCCHHCCEEECCCCHHHHHHHHHHCCC PVRQVSGVAVSQRSASGRVLRVRMATDGGNIEMNSNPFRLLVGATKMKSTLCSIGISGKT CCHHCCCEEEECCCCCCCEEEEEEECCCCEEEECCCCEEEEEECHHHHHHHHHCCCCCCE ILFRGRGYGHGVGMSQWGAEGMARKGAAYEAILRQYYPHTTVRALY EEEECCCCCCCCCCHHHCCCHHHHCCHHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure GICLRFLLSGVILLFACSLLPLKASAAAAQGSFDPAPLRAQAVNLYQQGKILESLELWH HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH AIYRLGDSAAVRSEALVMLGDINAMFLDRKDRAIDLYEKGIALGGLPHVIARAWYNLAML HHHHCCCCHHHCCCEEEEEECCCEEEECCCCCEEHHHHCCCCCCCHHHHHHHHHHHEEEE RYDRGEYTAARLAFEGYLKRFPNGPKAGGSRHMLTRLQKHSFAGKADVPPAEITPRPIPR EECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC REPNIRVALKHASEIIVTPPSGTVAGYEGRRARVMAGKLRITVQGDDICLNGRPMGASVS CCCCEEEEEECCCEEEEECCCCCEECCCCCEEEEEEEEEEEEEECCEEEECCCCCCCCEE LLARGGTFAMGDARYAGSMSFHVREGKVLAVNTLPLERYLEGVVPCEMPDSFRPQALRAQ EEECCCEEEECCCCCCCCEEEEEECCCEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHH AVAARTHALYMLLRSSERPYDVWSTTASQVYGGVISGGRQAAEAVKATRGRILVYNGAIA HHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECEEE LAFYHSHSGGVLEDDSAVWDVDMPYYRVQADPVSNSIKDMQWSCSIPLSELAMLLRSRGY EEEEECCCCCEEECCCCEEECCCCEEEEECCCCCCCHHCCEEECCCCHHHHHHHHHHCCC PVRQVSGVAVSQRSASGRVLRVRMATDGGNIEMNSNPFRLLVGATKMKSTLCSIGISGKT CCHHCCCEEEECCCCCCCEEEEEEECCCCEEEECCCCEEEEEECHHHHHHHHHCCCCCCE ILFRGRGYGHGVGMSQWGAEGMARKGAAYEAILRQYYPHTTVRALY EEEECCCCCCCCCCHHHCCCHHHHCCHHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA