| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356761
Identifier: 78356761
GI number: 78356761
Start: 1776677
End: 1777792
Strand: Reverse
Name: 78356761
Synonym: Dde_1718
Alternate gene names: NA
Gene position: 1777792-1776677 (Counterclockwise)
Preceding gene: 78356762
Following gene: 78356760
Centisome position: 47.66
GC content: 51.43
Gene sequence:
>1116_bases ATGCCGTGGTACTTAGAGCATCATTTTGATCCTGATTTCGACCACATGCATTTGAAACCCCGGGAAACGGAGTCGGGCAA GGTGGACCACTACAATCTGGGGTACGCCCAGAATGTGGTGCATGGACAGCTGCTGGCAGAACTGAAAGAGGTTTCGCAGG AAGAGACCGCCGGACTGGACAGCAGATATGTCTATGAAAAGCCGGTACTGCCCTGCGGTCCAAACTGTGCAATTGACCCT GCCAACAGCCATGCCATCGTCGCCGCTGCCAACGGATACGTTTTTTATAACGAAGGGCTGATAACCGTAAAAAAGATGCT TAATGTCCGCCGCGATGTGGACTTTCACACCGGAAATGTCGTTTTTGTCAACGATATCGCAGTACATGGCAGCGTGCGCA CCGGATTTGAAGTGCATGGCAACAATGTACTGGTCAAAGGGGTTATCGAAGGTGCCAGAATACATGCCCGCGGCGCTCTT GCCAGCGAAACCGGCGTCAAAGGGCAGAAAAGCGCGCAGTTGTATGCTGCCAAAGCCATCCGGCTTCCTTTTTGTGAAAA TGCCCAGCTGCGCACGCACGGCAATGTCATGATTGACACATCATGCCTGCACACTGATGTATATGTGTCGGGCAGTCTTG TGGTAAAAGAGCGTCTTCAGGGCGGCACCGTATACACCTCCGGCCTCGTCTATGTTATGGAGCAGCTGGGCGGCGGTCAG GGAACGCCTACACAGTTTGTTATGGGCTACGACCCGTTCCTGTTCAGCAAACTGCGAGATGTGGAAGCAAGCATCAAGAA CCTGAAAAGTAAAGTAGATTCACTGGAAACGCTGTGCGCCAAAAGCCCGGAACACCGGACAGAATTTTCGCCGCTTAAGA ATGAAACCAGCAGAAAATTGCAGGCCATGCACCGCATCCGCACGGAAATTTGGGAAAAATTTGACGCACAGGACGTGCCA CCCGGCTGCAGAATACTGGTTCCGGGAAAAGTGCGCCCCGGCGTTGAAATCAGCATCGGCAGAGCATTTCTGAAGGTAAA TGACTATCTGGAAGATGTTCGTTTCTGCCTTGAAAATGAAGAAATTGTAATTCACTCACCTGCTGTGGATAAGTAA
Upstream 100 bases:
>100_bases TACCGAAGACGAACTGCTGACGGTGGTGGGCTCATAGGACAGACGACATGCCGCCGGACTGACGGCCGGCAATGAACATC TCAGGCCGGAAGGAGTGCCC
Downstream 100 bases:
>100_bases CTTAACACGGAATTAGTGCGAAGATTATGGATATAGGAACAATTATCGGCATTGTCGGTGCTATCGGGCTCATCATCGGT GCCATCGTGATGGGCAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MPWYLEHHFDPDFDHMHLKPRETESGKVDHYNLGYAQNVVHGQLLAELKEVSQEETAGLDSRYVYEKPVLPCGPNCAIDP ANSHAIVAAANGYVFYNEGLITVKKMLNVRRDVDFHTGNVVFVNDIAVHGSVRTGFEVHGNNVLVKGVIEGARIHARGAL ASETGVKGQKSAQLYAAKAIRLPFCENAQLRTHGNVMIDTSCLHTDVYVSGSLVVKERLQGGTVYTSGLVYVMEQLGGGQ GTPTQFVMGYDPFLFSKLRDVEASIKNLKSKVDSLETLCAKSPEHRTEFSPLKNETSRKLQAMHRIRTEIWEKFDAQDVP PGCRILVPGKVRPGVEISIGRAFLKVNDYLEDVRFCLENEEIVIHSPAVDK
Sequences:
>Translated_371_residues MPWYLEHHFDPDFDHMHLKPRETESGKVDHYNLGYAQNVVHGQLLAELKEVSQEETAGLDSRYVYEKPVLPCGPNCAIDP ANSHAIVAAANGYVFYNEGLITVKKMLNVRRDVDFHTGNVVFVNDIAVHGSVRTGFEVHGNNVLVKGVIEGARIHARGAL ASETGVKGQKSAQLYAAKAIRLPFCENAQLRTHGNVMIDTSCLHTDVYVSGSLVVKERLQGGTVYTSGLVYVMEQLGGGQ GTPTQFVMGYDPFLFSKLRDVEASIKNLKSKVDSLETLCAKSPEHRTEFSPLKNETSRKLQAMHRIRTEIWEKFDAQDVP PGCRILVPGKVRPGVEISIGRAFLKVNDYLEDVRFCLENEEIVIHSPAVDK >Mature_370_residues PWYLEHHFDPDFDHMHLKPRETESGKVDHYNLGYAQNVVHGQLLAELKEVSQEETAGLDSRYVYEKPVLPCGPNCAIDPA NSHAIVAAANGYVFYNEGLITVKKMLNVRRDVDFHTGNVVFVNDIAVHGSVRTGFEVHGNNVLVKGVIEGARIHARGALA SETGVKGQKSAQLYAAKAIRLPFCENAQLRTHGNVMIDTSCLHTDVYVSGSLVVKERLQGGTVYTSGLVYVMEQLGGGQG TPTQFVMGYDPFLFSKLRDVEASIKNLKSKVDSLETLCAKSPEHRTEFSPLKNETSRKLQAMHRIRTEIWEKFDAQDVPP GCRILVPGKVRPGVEISIGRAFLKVNDYLEDVRFCLENEEIVIHSPAVDK
Specific function: Unknown
COG id: COG1315
COG function: function code L; Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41228; Mature: 41097
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWYLEHHFDPDFDHMHLKPRETESGKVDHYNLGYAQNVVHGQLLAELKEVSQEETAGLD CCCEECCCCCCCCCCEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCC SRYVYEKPVLPCGPNCAIDPANSHAIVAAANGYVFYNEGLITVKKMLNVRRDVDFHTGNV CCEEEECCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHCCCCCCCCE VFVNDIAVHGSVRTGFEVHGNNVLVKGVIEGARIHARGALASETGVKGQKSAQLYAAKAI EEEEEEEEECCCCCCEEECCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCHHEEEEHEE RLPFCENAQLRTHGNVMIDTSCLHTDVYVSGSLVVKERLQGGTVYTSGLVYVMEQLGGGQ ECCCCCCCEEEECCCEEEECCEEEEEEEECCCEEEEHHHCCCEEEHHHHHHHHHHHCCCC GTPTQFVMGYDPFLFSKLRDVEASIKNLKSKVDSLETLCAKSPEHRTEFSPLKNETSRKL CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH QAMHRIRTEIWEKFDAQDVPPGCRILVPGKVRPGVEISIGRAFLKVNDYLEDVRFCLENE HHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEECCEEEHHHHHHHHHHHHHCCC EIVIHSPAVDK CEEEECCCCCC >Mature Secondary Structure PWYLEHHFDPDFDHMHLKPRETESGKVDHYNLGYAQNVVHGQLLAELKEVSQEETAGLD CCEECCCCCCCCCCEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCC SRYVYEKPVLPCGPNCAIDPANSHAIVAAANGYVFYNEGLITVKKMLNVRRDVDFHTGNV CCEEEECCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHCCCCCCCCE VFVNDIAVHGSVRTGFEVHGNNVLVKGVIEGARIHARGALASETGVKGQKSAQLYAAKAI EEEEEEEEECCCCCCEEECCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCHHEEEEHEE RLPFCENAQLRTHGNVMIDTSCLHTDVYVSGSLVVKERLQGGTVYTSGLVYVMEQLGGGQ ECCCCCCCEEEECCCEEEECCEEEEEEEECCCEEEEHHHCCCEEEHHHHHHHHHHHCCCC GTPTQFVMGYDPFLFSKLRDVEASIKNLKSKVDSLETLCAKSPEHRTEFSPLKNETSRKL CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH QAMHRIRTEIWEKFDAQDVPPGCRILVPGKVRPGVEISIGRAFLKVNDYLEDVRFCLENE HHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEECCEEEHHHHHHHHHHHHHCCC EIVIHSPAVDK CEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA