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The map label for this gene is ytxE [H]

Identifier: 78356759

GI number: 78356759

Start: 1775127

End: 1775888

Strand: Reverse

Name: ytxE [H]

Synonym: Dde_1716

Alternate gene names: 78356759

Gene position: 1775888-1775127 (Counterclockwise)

Preceding gene: 78356760

Following gene: 78356758

Centisome position: 47.61

GC content: 51.97

Gene sequence:

>762_bases
ATGGCTGCAGAAGATAAAAAAGCTCCACCGCCACCGAAGCGGCAGGACGATACCCCCTGTGAAGAGGGGCTGCCGCCGTG
GATGGCCACCTTTGCCGACATGATGTCGCTGCTGCTCTGTTTTTTTGTGCTCCTTTTGTCGTTCGCTCAGCAGGATGCAA
ATAAATTCAAAACACTTATGGGTTCGATAAAAGAAGCTTTCGGGGTACAGATAAAGCGTAAGGAAGCCAGTTTTGCGGCA
TTCTCACCTTCCGAGTTCGAACGCAAGGACGTGGAGCTGGACAAAGAGAACAAAGAGCTGCTGGGGATGGTTCTGGAAGT
AAAAAACTTTGTCATTCAGGATCCCGAGCTTAAAAAGACCGCAAAGATAACCACTGAAGACGCCGGCGTTGTCATCAGAA
TACCCTCTTACGCGTTATTTGCTCCCGGATCGGCAAAGCCGCTGCCCGATGCCGCGTCAAAAACCGCCACAGTTGTCAGA
ATACTGCGTGAACGCAATCTGGACCTTGTTGTCCGTTGTCACACAAGCGATGAAAAAGCAGAGGAAGAATCGCTGTATCC
CAGCAACTGGGAGCTGTCTTCAGCGCGGGCGGCCGCCGTACTGCGTCTGCTGATAAAAGAGGGAGACATACCCCCGTCGC
GTATGAAAGCCGTGGGGTATGCCGATTCACAACCTCTTTTGCCCAACAACACCGACGAAAACAGAGCCATCAACAGCCGG
ATGGAGTTTTACTTTCACGCTCCGAGCGTGAAAAGCTGGTAG

Upstream 100 bases:

>100_bases
CGTGCTTTCCATACTGAACGGCGATCACCCGAGCATTGTGCGGGAAAAGCTGGAATCATTCCTTCCCCCGAGCCAGCGCT
CGGCCAAGAAGTAGGAAACG

Downstream 100 bases:

>100_bases
CCCGATGCAGCAACGTACCTCTTATTCCGCCACGCCGCTGTATTCAGCCGACGGAACGCTGTGTGATATTGAAATAAGCG
TCGGCACCCGGCGGTGGAAA

Product: chemotaxis protein PomB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MAAEDKKAPPPPKRQDDTPCEEGLPPWMATFADMMSLLLCFFVLLLSFAQQDANKFKTLMGSIKEAFGVQIKRKEASFAA
FSPSEFERKDVELDKENKELLGMVLEVKNFVIQDPELKKTAKITTEDAGVVIRIPSYALFAPGSAKPLPDAASKTATVVR
ILRERNLDLVVRCHTSDEKAEEESLYPSNWELSSARAAAVLRLLIKEGDIPPSRMKAVGYADSQPLLPNNTDENRAINSR
MEFYFHAPSVKSW

Sequences:

>Translated_253_residues
MAAEDKKAPPPPKRQDDTPCEEGLPPWMATFADMMSLLLCFFVLLLSFAQQDANKFKTLMGSIKEAFGVQIKRKEASFAA
FSPSEFERKDVELDKENKELLGMVLEVKNFVIQDPELKKTAKITTEDAGVVIRIPSYALFAPGSAKPLPDAASKTATVVR
ILRERNLDLVVRCHTSDEKAEEESLYPSNWELSSARAAAVLRLLIKEGDIPPSRMKAVGYADSQPLLPNNTDENRAINSR
MEFYFHAPSVKSW
>Mature_252_residues
AAEDKKAPPPPKRQDDTPCEEGLPPWMATFADMMSLLLCFFVLLLSFAQQDANKFKTLMGSIKEAFGVQIKRKEASFAAF
SPSEFERKDVELDKENKELLGMVLEVKNFVIQDPELKKTAKITTEDAGVVIRIPSYALFAPGSAKPLPDAASKTATVVRI
LRERNLDLVVRCHTSDEKAEEESLYPSNWELSSARAAAVLRLLIKEGDIPPSRMKAVGYADSQPLLPNNTDENRAINSRM
EFYFHAPSVKSW

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 28266; Mature: 28135

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAEDKKAPPPPKRQDDTPCEEGLPPWMATFADMMSLLLCFFVLLLSFAQQDANKFKTLM
CCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSIKEAFGVQIKRKEASFAAFSPSEFERKDVELDKENKELLGMVLEVKNFVIQDPELKKT
HHHHHHHCCEEEECCCCEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH
AKITTEDAGVVIRIPSYALFAPGSAKPLPDAASKTATVVRILRERNLDLVVRCHTSDEKA
HEEEECCCCEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHH
EEESLYPSNWELSSARAAAVLRLLIKEGDIPPSRMKAVGYADSQPLLPNNTDENRAINSR
HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
MEFYFHAPSVKSW
EEEEEECCCCCCC
>Mature Secondary Structure 
AAEDKKAPPPPKRQDDTPCEEGLPPWMATFADMMSLLLCFFVLLLSFAQQDANKFKTLM
CCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSIKEAFGVQIKRKEASFAAFSPSEFERKDVELDKENKELLGMVLEVKNFVIQDPELKKT
HHHHHHHCCEEEECCCCEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH
AKITTEDAGVVIRIPSYALFAPGSAKPLPDAASKTATVVRILRERNLDLVVRCHTSDEKA
HEEEECCCCEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHH
EEESLYPSNWELSSARAAAVLRLLIKEGDIPPSRMKAVGYADSQPLLPNNTDENRAINSR
HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
MEFYFHAPSVKSW
EEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934817; 9387221; 9384377 [H]