| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is yloV [H]
Identifier: 78356687
GI number: 78356687
Start: 1694524
End: 1696338
Strand: Reverse
Name: yloV [H]
Synonym: Dde_1644
Alternate gene names: 78356687
Gene position: 1696338-1694524 (Counterclockwise)
Preceding gene: 78356690
Following gene: 78356686
Centisome position: 45.48
GC content: 54.93
Gene sequence:
>1815_bases TTGACCACCAGCACAAATAAGATAAAATATCTTGATGGTATACGCTTCAAGCGGGCCATTAACGCCGCTGCACACCGGCT TATTGAAAAACACGGACACCTGAACGCCATCAACGTGTTTCCCGTTCCCGACGGTGATACGGGCAGCAATATGGCCGGAA CCATGCGCAACATTGTGGACAACTCTGCGCAGACCAAAGACGGTTCCATCGAAGGTATGAGCAAGGTCATTGCCGAATCG GCACTGATGGGGGCCAGAGGGAACTCCGGAGTCATTCTGGCGCAGTTTCTGTGCGGTTTTTCAGAAGGCGTCAAAGATCT GAAACGTGTAACGCCGCCCGATTTCATTCAGGCCGCTTCGCTGGCAACCAGACGCGCACTCGAATCCATATCAAACCCCA AAGAAGGGACCATCCTCACGGTTATCCGCGACTGGTCCGAGCATCTTTCAAGCAACGCCGACTCGTACAAAGATTTTCAG CATATCATGTATGATTCACTGCGCAAGGCGCGGGAATCGGTGCAGCAGACCAAAGAAAAACTGGCCACCCTCAAAGCGGC AGACGTGGTGGATGCCGGGGGGCTTGGTTTTTTATATCTCCTTGAAGGCATTGTAGAATTTACTGAAAAAGGCTCGCTGA ACCGTCAGGATTCGACAAAAAGCACTGTTGTCATAGAGGAAGCGGAAGAAAACGCACAGGAACGTGTGGCCGTGGATTCG CTGGAATTCAGGTACTGCACCGAATGCATGATCCGCGGAACGGACATTGACGCCGCAGCGCTGCGGGAAAAGCTGGCCGC CATGGGTGACAGCCTTGTTGTGGCGGGCACAGCCGAAACCGTACGGGTTCATGTGCACACCAACAGCCCAGACGAAGTAT TTTCACTGGCAGCGGGGTACGGCACCGTGGAATGCCGCAAAGCCGACGATATGCTGGCCCAGCATCTTGCACTCACTTCC GGCCGCACCCCCCGTGTCGGCATTGTCACTGACTCCACATGCGACCTGCCCGAAGACCTGATGCAGGAGTACGGCATACG CTTCGCTCCGCTGAAGCTCTATCTGGATGAAGAGGAGTTCATTGACAAACTGTCCATCAGCACTGCTGAATTCAACAGCC GCCTGCGTGTTTCCCGTTCGGCGAAAACATCTCAACCCTCGCCCGCCGACTTCAAACACCTGTATGACGACATGCTGGCG CTGCATGATGAAGTCGTTTCGCTGCATGTCATGGCCAAATACAGCGGCACACTGCAATCGGCAGCCAACATAGGCAAAAT GGCTTCAAAGCCGGTGCACACATTTGACGGCCAAACTCTTTCTGCCGGTCTCGGGCTGCTTGTGCTTGAGGCGGCCAAGC GTGCCAGAGCCGGACTTGACGCACCCGCCATACTGGACATGGCCGCAAAAGACGTAAAAAATCTCCATGTATTTGTCGCC ATGGACACGCTTGACTTTGCCGTGCGGGGCGGCCGTATGAGCAAAGGCGCCGGAGCGGTGGCAAAATTTCTTAATATCAA GCCGGTGCTTGAATTTGACGCGCGCGACCATGGCACGGTAAAAGTCGTGGAAAAAGGACTCGGAAGACGCATGGCGGAAC TGAAACTGTTACGGCGTCTTGAAAAAACCATAAGCGGCAAAAAAAATATACGGATTGCCATCGCACACGTATCCGCGCCG GAAAGCGCCGGGCATCTCGGGCGGCTGATAACCGAACGTCTGGGCACTGCCCCGCTTTATACCATTGAAGCGTCACCGGT GCTGGGCACACACAGCGGACCGGGAGCATGCGCAGTTGCGGTGCTGACGGACTGA
Upstream 100 bases:
>100_bases AGCACAAAAGCAGAACCTTGCACATGCGCATGATCTGCTTTATACCTACAGCGCACGATCACATGGGGGAATCGTACTTT TCCCGCCGAGGAGCCTTTCT
Downstream 100 bases:
>100_bases TGCGAAGAACAGGTCCTGCTTGCACAGCGGGATGAGGAGTCGTTTGCACGTGAAAATGCGCCATATACCGGGCCTCATAC TTCTGGCGCTGCTGTTATGT
Product: degV family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 604; Mature: 603
Protein sequence:
>604_residues MTTSTNKIKYLDGIRFKRAINAAAHRLIEKHGHLNAINVFPVPDGDTGSNMAGTMRNIVDNSAQTKDGSIEGMSKVIAES ALMGARGNSGVILAQFLCGFSEGVKDLKRVTPPDFIQAASLATRRALESISNPKEGTILTVIRDWSEHLSSNADSYKDFQ HIMYDSLRKARESVQQTKEKLATLKAADVVDAGGLGFLYLLEGIVEFTEKGSLNRQDSTKSTVVIEEAEENAQERVAVDS LEFRYCTECMIRGTDIDAAALREKLAAMGDSLVVAGTAETVRVHVHTNSPDEVFSLAAGYGTVECRKADDMLAQHLALTS GRTPRVGIVTDSTCDLPEDLMQEYGIRFAPLKLYLDEEEFIDKLSISTAEFNSRLRVSRSAKTSQPSPADFKHLYDDMLA LHDEVVSLHVMAKYSGTLQSAANIGKMASKPVHTFDGQTLSAGLGLLVLEAAKRARAGLDAPAILDMAAKDVKNLHVFVA MDTLDFAVRGGRMSKGAGAVAKFLNIKPVLEFDARDHGTVKVVEKGLGRRMAELKLLRRLEKTISGKKNIRIAIAHVSAP ESAGHLGRLITERLGTAPLYTIEASPVLGTHSGPGACAVAVLTD
Sequences:
>Translated_604_residues MTTSTNKIKYLDGIRFKRAINAAAHRLIEKHGHLNAINVFPVPDGDTGSNMAGTMRNIVDNSAQTKDGSIEGMSKVIAES ALMGARGNSGVILAQFLCGFSEGVKDLKRVTPPDFIQAASLATRRALESISNPKEGTILTVIRDWSEHLSSNADSYKDFQ HIMYDSLRKARESVQQTKEKLATLKAADVVDAGGLGFLYLLEGIVEFTEKGSLNRQDSTKSTVVIEEAEENAQERVAVDS LEFRYCTECMIRGTDIDAAALREKLAAMGDSLVVAGTAETVRVHVHTNSPDEVFSLAAGYGTVECRKADDMLAQHLALTS GRTPRVGIVTDSTCDLPEDLMQEYGIRFAPLKLYLDEEEFIDKLSISTAEFNSRLRVSRSAKTSQPSPADFKHLYDDMLA LHDEVVSLHVMAKYSGTLQSAANIGKMASKPVHTFDGQTLSAGLGLLVLEAAKRARAGLDAPAILDMAAKDVKNLHVFVA MDTLDFAVRGGRMSKGAGAVAKFLNIKPVLEFDARDHGTVKVVEKGLGRRMAELKLLRRLEKTISGKKNIRIAIAHVSAP ESAGHLGRLITERLGTAPLYTIEASPVLGTHSGPGACAVAVLTD >Mature_603_residues TTSTNKIKYLDGIRFKRAINAAAHRLIEKHGHLNAINVFPVPDGDTGSNMAGTMRNIVDNSAQTKDGSIEGMSKVIAESA LMGARGNSGVILAQFLCGFSEGVKDLKRVTPPDFIQAASLATRRALESISNPKEGTILTVIRDWSEHLSSNADSYKDFQH IMYDSLRKARESVQQTKEKLATLKAADVVDAGGLGFLYLLEGIVEFTEKGSLNRQDSTKSTVVIEEAEENAQERVAVDSL EFRYCTECMIRGTDIDAAALREKLAAMGDSLVVAGTAETVRVHVHTNSPDEVFSLAAGYGTVECRKADDMLAQHLALTSG RTPRVGIVTDSTCDLPEDLMQEYGIRFAPLKLYLDEEEFIDKLSISTAEFNSRLRVSRSAKTSQPSPADFKHLYDDMLAL HDEVVSLHVMAKYSGTLQSAANIGKMASKPVHTFDGQTLSAGLGLLVLEAAKRARAGLDAPAILDMAAKDVKNLHVFVAM DTLDFAVRGGRMSKGAGAVAKFLNIKPVLEFDARDHGTVKVVEKGLGRRMAELKLLRRLEKTISGKKNIRIAIAHVSAPE SAGHLGRLITERLGTAPLYTIEASPVLGTHSGPGACAVAVLTD
Specific function: Unknown
COG id: COG1461
COG function: function code R; Predicted kinase related to dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaL domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004007 - InterPro: IPR019986 [H]
Pfam domain/function: PF02734 Dak2 [H]
EC number: NA
Molecular weight: Translated: 65250; Mature: 65119
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS01098 LIPASE_GDSL_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSTNKIKYLDGIRFKRAINAAAHRLIEKHGHLNAINVFPVPDGDTGSNMAGTMRNIVD CCCCCCCEEHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHC NSAQTKDGSIEGMSKVIAESALMGARGNSGVILAQFLCGFSEGVKDLKRVTPPDFIQAAS CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCHHHHHHHHHHCCCHHHHHHHH LATRRALESISNPKEGTILTVIRDWSEHLSSNADSYKDFQHIMYDSLRKARESVQQTKEK HHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LATLKAADVVDAGGLGFLYLLEGIVEFTEKGSLNRQDSTKSTVVIEEAEENAQERVAVDS HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHCHHHHHHHHH LEFRYCTECMIRGTDIDAAALREKLAAMGDSLVVAGTAETVRVHVHTNSPDEVFSLAAGY HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCEEEEEEEECCCHHHHHHHHCCC GTVECRKADDMLAQHLALTSGRTPRVGIVTDSTCDLPEDLMQEYGIRFAPLKLYLDEEEF CCEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCEEEEEEEEECHHHH IDKLSISTAEFNSRLRVSRSAKTSQPSPADFKHLYDDMLALHDEVVSLHVMAKYSGTLQS HHHHHCCHHHHCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEHHHCCHHHH AANIGKMASKPVHTFDGQTLSAGLGLLVLEAAKRARAGLDAPAILDMAAKDVKNLHVFVA HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEE MDTLDFAVRGGRMSKGAGAVAKFLNIKPVLEFDARDHGTVKVVEKGLGRRMAELKLLRRL EEHHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH EKTISGKKNIRIAIAHVSAPESAGHLGRLITERLGTAPLYTIEASPVLGTHSGPGACAVA HHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCEECCCCCCCCEEEE VLTD EEEC >Mature Secondary Structure TTSTNKIKYLDGIRFKRAINAAAHRLIEKHGHLNAINVFPVPDGDTGSNMAGTMRNIVD CCCCCCEEHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHC NSAQTKDGSIEGMSKVIAESALMGARGNSGVILAQFLCGFSEGVKDLKRVTPPDFIQAAS CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCHHHHHHHHHHCCCHHHHHHHH LATRRALESISNPKEGTILTVIRDWSEHLSSNADSYKDFQHIMYDSLRKARESVQQTKEK HHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LATLKAADVVDAGGLGFLYLLEGIVEFTEKGSLNRQDSTKSTVVIEEAEENAQERVAVDS HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHCHHHHHHHHH LEFRYCTECMIRGTDIDAAALREKLAAMGDSLVVAGTAETVRVHVHTNSPDEVFSLAAGY HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCEEEEEEEECCCHHHHHHHHCCC GTVECRKADDMLAQHLALTSGRTPRVGIVTDSTCDLPEDLMQEYGIRFAPLKLYLDEEEF CCEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCEEEEEEEEECHHHH IDKLSISTAEFNSRLRVSRSAKTSQPSPADFKHLYDDMLALHDEVVSLHVMAKYSGTLQS HHHHHCCHHHHCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEHHHCCHHHH AANIGKMASKPVHTFDGQTLSAGLGLLVLEAAKRARAGLDAPAILDMAAKDVKNLHVFVA HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEE MDTLDFAVRGGRMSKGAGAVAKFLNIKPVLEFDARDHGTVKVVEKGLGRRMAELKLLRRL EEHHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH EKTISGKKNIRIAIAHVSAPESAGHLGRLITERLGTAPLYTIEASPVLGTHSGPGACAVA HHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCEECCCCCCCCEEEE VLTD EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]