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The map label for this gene is ymfD [H]

Identifier: 78356690

GI number: 78356690

Start: 1697296

End: 1698456

Strand: Reverse

Name: ymfD [H]

Synonym: Dde_1647

Alternate gene names: 78356690

Gene position: 1698456-1697296 (Counterclockwise)

Preceding gene: 78356691

Following gene: 78356687

Centisome position: 45.53

GC content: 58.31

Gene sequence:

>1161_bases
ATGACAATACCCCCGCTGCTGCGAGACAAAAATCTGCTGATAACTTTCGGAATCACTCTGACCGTGGTCATGGGGGTTTC
AAGTATCATTCCCACCCTGCCGCTGGCCGCGCACGAGCTCGGCGCACCCGTTGCCACCATAGGGCTGATAATCACCGCGT
TCACGCTGCCCGGCATAGTGCTCACACCGCTGGCCGGTATTCTGGCTGACAGATACGGCAGAAAAAAAGTGCTCATCCCG
TCACTTTTACTTTTTGCCACAGCCGGAGGGGCCTGCGGCTTTGCCGACAACCTGCATACATTGCTGATGCTGCGTTTTCT
GCAGGGCGTGGGCGTAGCCCCGCTGGGAATACTGCATGCAACAATCATCGGCGACCTGTACGAAGGCCCCGACCGCGTAA
GAGCCATGGGCTACAATGCCGGAGTGCTGAGCCTGGGGACCGCTCTTTATCCTGCCATCGGCGGCATCCTGGGCGAGCTT
GGCTGGCATGCGCCTTTTTTTCTTCCGCTTGCCACACTGCCCATGGCGTTCATAGCCTGGCGCGGTCTGACCCTGCCCGC
ACCGGACACATCGCAAAGCATGGGGGCGTACTTCAAAAATACCCTGCGTGCCATGAAAAGCCCGCAGGCTGTCGGGCTCT
TCTCTGTTTCTTTTCTGACTTTCACCATGCTGTACGGCCCTGTCATCACGTTCATCCCCATTCTGGCTGACCATCGTTTC
ACAGCATCGCCCGCCACCATCGGTGCACTTTTTGCCCTGACATCACTGGGCACGGCCCTCAGCGCTTCGCGCATGGGCAG
ACTGGCCGAACAGTTCAAACCGCACCGCCTGCTGCTTGCAGGGCACGTTTTCTATCTGGTCGCCATGCTGCTTATGCCGC
ATATGCCCACGTTCTGGTGGCTGCTGCTCCCGGTCTTTCTTTTCGGTGTGGCACAGGGGCTCAACTATCCCAATCTTATG
ACGCTGCTTACAGCCCTTGCCCCGCTGGAACAACGCGCGGCGATCATGGCTGTAAACGGCATGGTGCTGCGCCTTTCGCA
GACCATCGCCCCGCTGGCTGTCACCAGCATTTATGCCGTATCCGGATTTTCCGGAGTGTATGCTTTCGGCGGTGCCACTG
CCGTTGTAATGTTCATCATTACGGCGCACAGCATCCGCTGA

Upstream 100 bases:

>100_bases
TTGACCGGTGAGGCTATCAGGCATATGGACTACAGTTCATTGCCGTCATCCCGCGCCTGCCGGACAAGGCACAGCATGCA
ACCGTCTGCCGGAAAGCTCC

Downstream 100 bases:

>100_bases
CGCATAACTTCTCAACAACAACAACACCCGAGAGTTTCACCACCTACACGGCCCCCCCTCCGCCGGCCATTCCCCGTCAA
CCCGTGCCGAAAAAAAGTGC

Product: major facilitator superfamily protein

Products: Proton [Cytoplasm]; drug [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MTIPPLLRDKNLLITFGITLTVVMGVSSIIPTLPLAAHELGAPVATIGLIITAFTLPGIVLTPLAGILADRYGRKKVLIP
SLLLFATAGGACGFADNLHTLLMLRFLQGVGVAPLGILHATIIGDLYEGPDRVRAMGYNAGVLSLGTALYPAIGGILGEL
GWHAPFFLPLATLPMAFIAWRGLTLPAPDTSQSMGAYFKNTLRAMKSPQAVGLFSVSFLTFTMLYGPVITFIPILADHRF
TASPATIGALFALTSLGTALSASRMGRLAEQFKPHRLLLAGHVFYLVAMLLMPHMPTFWWLLLPVFLFGVAQGLNYPNLM
TLLTALAPLEQRAAIMAVNGMVLRLSQTIAPLAVTSIYAVSGFSGVYAFGGATAVVMFIITAHSIR

Sequences:

>Translated_386_residues
MTIPPLLRDKNLLITFGITLTVVMGVSSIIPTLPLAAHELGAPVATIGLIITAFTLPGIVLTPLAGILADRYGRKKVLIP
SLLLFATAGGACGFADNLHTLLMLRFLQGVGVAPLGILHATIIGDLYEGPDRVRAMGYNAGVLSLGTALYPAIGGILGEL
GWHAPFFLPLATLPMAFIAWRGLTLPAPDTSQSMGAYFKNTLRAMKSPQAVGLFSVSFLTFTMLYGPVITFIPILADHRF
TASPATIGALFALTSLGTALSASRMGRLAEQFKPHRLLLAGHVFYLVAMLLMPHMPTFWWLLLPVFLFGVAQGLNYPNLM
TLLTALAPLEQRAAIMAVNGMVLRLSQTIAPLAVTSIYAVSGFSGVYAFGGATAVVMFIITAHSIR
>Mature_385_residues
TIPPLLRDKNLLITFGITLTVVMGVSSIIPTLPLAAHELGAPVATIGLIITAFTLPGIVLTPLAGILADRYGRKKVLIPS
LLLFATAGGACGFADNLHTLLMLRFLQGVGVAPLGILHATIIGDLYEGPDRVRAMGYNAGVLSLGTALYPAIGGILGELG
WHAPFFLPLATLPMAFIAWRGLTLPAPDTSQSMGAYFKNTLRAMKSPQAVGLFSVSFLTFTMLYGPVITFIPILADHRFT
ASPATIGALFALTSLGTALSASRMGRLAEQFKPHRLLLAGHVFYLVAMLLMPHMPTFWWLLLPVFLFGVAQGLNYPNLMT
LLTALAPLEQRAAIMAVNGMVLRLSQTIAPLAVTSIYAVSGFSGVYAFGGATAVVMFIITAHSIR

Specific function: Involved in secretion of bacillibactin [H]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001958 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40999; Mature: 40868

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPPLLRDKNLLITFGITLTVVMGVSSIIPTLPLAAHELGAPVATIGLIITAFTLPGIV
CCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHCHHH
LTPLAGILADRYGRKKVLIPSLLLFATAGGACGFADNLHTLLMLRFLQGVGVAPLGILHA
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
TIIGDLYEGPDRVRAMGYNAGVLSLGTALYPAIGGILGELGWHAPFFLPLATLPMAFIAW
HHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RGLTLPAPDTSQSMGAYFKNTLRAMKSPQAVGLFSVSFLTFTMLYGPVITFIPILADHRF
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TASPATIGALFALTSLGTALSASRMGRLAEQFKPHRLLLAGHVFYLVAMLLMPHMPTFWW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
LLLPVFLFGVAQGLNYPNLMTLLTALAPLEQRAAIMAVNGMVLRLSQTIAPLAVTSIYAV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
SGFSGVYAFGGATAVVMFIITAHSIR
CCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TIPPLLRDKNLLITFGITLTVVMGVSSIIPTLPLAAHELGAPVATIGLIITAFTLPGIV
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHCHHH
LTPLAGILADRYGRKKVLIPSLLLFATAGGACGFADNLHTLLMLRFLQGVGVAPLGILHA
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
TIIGDLYEGPDRVRAMGYNAGVLSLGTALYPAIGGILGELGWHAPFFLPLATLPMAFIAW
HHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RGLTLPAPDTSQSMGAYFKNTLRAMKSPQAVGLFSVSFLTFTMLYGPVITFIPILADHRF
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TASPATIGALFALTSLGTALSASRMGRLAEQFKPHRLLLAGHVFYLVAMLLMPHMPTFWW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
LLLPVFLFGVAQGLNYPNLMTLLTALAPLEQRAAIMAVNGMVLRLSQTIAPLAVTSIYAV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
SGFSGVYAFGGATAVVMFIITAHSIR
CCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]