| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78356658
Identifier: 78356658
GI number: 78356658
Start: 1662965
End: 1664461
Strand: Direct
Name: 78356658
Synonym: Dde_1615
Alternate gene names: NA
Gene position: 1662965-1664461 (Clockwise)
Preceding gene: 78356657
Following gene: 78356659
Centisome position: 44.58
GC content: 54.31
Gene sequence:
>1497_bases ATGATGCGGCAGACGGCTGAAGGAGTGCCGGGGCGACCGCCAAGTCTGGCCCCGACACAAGTGCCGTTTTCCGCAGGGGA GTTCCTTATGGACAAGGACAGCACCGGTATACTGTATCTTGAGAGCCGCAGGCTGGTCAAACGCTGGAGCGGACCGTGGC CTGCTCTGGTCAACACGCTTGTGATGGCGGTGTTTTTTTACATCACGTGGTGGATTTTTCAGGACCCGCGGGGTGTATTC CGTCTTTATACGCCGTATGTGGGCTATATGGTCTGCCGCTGGATGCTCATTCTTTTCATCTGGCTTGCGTATATTTTCGA CTTCTGGCCGTTTAAACGGTCGTGGCTGGAGCGTACGCATCCCGTCGTCAAGGGAACGGTGCTCACACTGGTAAGTGTGG CCGCCATGTTTGTGCTTATCAAGGGCTTTTTCATCGAACTGCTGGGTAACTACGGCATAGCGTATTTCAACCCTTCGCGG CTTGAAGAAATGGGAATCACCGAGTTTTATGCCCTTGAATACGCAACTGAAGCCATCATGATGTTTGCAGCCATTGCTTC GTGGCTTTCACCCAGCTGGGTGGTCGCCTGCGAGGGGGCTCCGTGGAACAAGCTGAAGCAGCCGGCCAAGGGGCTTACCA TAATGGTCGTGACGTTCTTCCTGAGCATGGTTGTCTATTTTGTGACCATGCACTCACACATGGCCATCTTGTTCTACCCG TGGCAGCAGTACACAGCCATTACCCCGCCGTACTGGGAAACTTTTGCCAATACGGTTTCAGGCAACTTCCACATTGCGTG GATCATGTGCTGCACTGTTGTTGTCTGGCAGTTTGAAACCATCTGGGAAAGGTATCCCTTTAACCTGATCAAAACCGACT GGCTGCGCCGCACCGCATCCTTCTTCGGTATTATTCTGATAGCTCTGGCACTGTGCTTTTTCCTGTACTACGCGCAGGAT CTTGTATGGGGCCAAACCGTACGCGGTACGCGCCGTCTGGCCGCACCTGACTGGCGCTGGCTGCATGTGGGTGAAATGGC CATTTTCTGGCTGGTACCCACCCTGTTTCTTAATTTCTACTGCGGCAACTGGCCCAACAACTTCAGCCGTCCGGTACGGG TGTGCATCCGTACGTTCCTGACCGCTGCGCTGGCCGTACTGGTATACGTTGTCTACTACAAAACGTCGCACCTTTTCCTG GGAACGCAGAAGGGCTTTTCGCATCCGCAGCAGTTCCCCATGATTCCCATGATCTGGCTCATCAATATCTTTTTGATCAA CGTCTGGTTCATGGACGGCTGGCCGGGATGGAAGGCTGTGCCCAGAACAGCTGAAGAACTGCAGGAAGTGGAAGACGAAA AGGTTGCCAGTGATGTGCGCTGGTCGCCTGCTCTGGCAAAAGGCCTTGCCGTGGGCATTGCCTGCGGTGTGGGGCTGTAT GCCGTAGTGGTGGGTGTCCTGCCGTGGATAGGGCAGACCGTGCAGATAATTAAATAA
Upstream 100 bases:
>100_bases TTGCGCAGGGCCTATCTGCGGGCCATGGGGGCCGGAGTTGATCCCGCAACGCTGGCACCCGAAGAGTTGGTGAGAAGGTT TTCTTCAGAGGTAACGTCTA
Downstream 100 bases:
>100_bases AGGAAAGCGCAGGAGTATATGATGAAAGAAAACAATATGAGCCGGCGCGACTTTGTGAAAGGTGTGGCCACCGGTGTCTG CGCTGGTGCCTTTGCCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues MMRQTAEGVPGRPPSLAPTQVPFSAGEFLMDKDSTGILYLESRRLVKRWSGPWPALVNTLVMAVFFYITWWIFQDPRGVF RLYTPYVGYMVCRWMLILFIWLAYIFDFWPFKRSWLERTHPVVKGTVLTLVSVAAMFVLIKGFFIELLGNYGIAYFNPSR LEEMGITEFYALEYATEAIMMFAAIASWLSPSWVVACEGAPWNKLKQPAKGLTIMVVTFFLSMVVYFVTMHSHMAILFYP WQQYTAITPPYWETFANTVSGNFHIAWIMCCTVVVWQFETIWERYPFNLIKTDWLRRTASFFGIILIALALCFFLYYAQD LVWGQTVRGTRRLAAPDWRWLHVGEMAIFWLVPTLFLNFYCGNWPNNFSRPVRVCIRTFLTAALAVLVYVVYYKTSHLFL GTQKGFSHPQQFPMIPMIWLINIFLINVWFMDGWPGWKAVPRTAEELQEVEDEKVASDVRWSPALAKGLAVGIACGVGLY AVVVGVLPWIGQTVQIIK
Sequences:
>Translated_498_residues MMRQTAEGVPGRPPSLAPTQVPFSAGEFLMDKDSTGILYLESRRLVKRWSGPWPALVNTLVMAVFFYITWWIFQDPRGVF RLYTPYVGYMVCRWMLILFIWLAYIFDFWPFKRSWLERTHPVVKGTVLTLVSVAAMFVLIKGFFIELLGNYGIAYFNPSR LEEMGITEFYALEYATEAIMMFAAIASWLSPSWVVACEGAPWNKLKQPAKGLTIMVVTFFLSMVVYFVTMHSHMAILFYP WQQYTAITPPYWETFANTVSGNFHIAWIMCCTVVVWQFETIWERYPFNLIKTDWLRRTASFFGIILIALALCFFLYYAQD LVWGQTVRGTRRLAAPDWRWLHVGEMAIFWLVPTLFLNFYCGNWPNNFSRPVRVCIRTFLTAALAVLVYVVYYKTSHLFL GTQKGFSHPQQFPMIPMIWLINIFLINVWFMDGWPGWKAVPRTAEELQEVEDEKVASDVRWSPALAKGLAVGIACGVGLY AVVVGVLPWIGQTVQIIK >Mature_498_residues MMRQTAEGVPGRPPSLAPTQVPFSAGEFLMDKDSTGILYLESRRLVKRWSGPWPALVNTLVMAVFFYITWWIFQDPRGVF RLYTPYVGYMVCRWMLILFIWLAYIFDFWPFKRSWLERTHPVVKGTVLTLVSVAAMFVLIKGFFIELLGNYGIAYFNPSR LEEMGITEFYALEYATEAIMMFAAIASWLSPSWVVACEGAPWNKLKQPAKGLTIMVVTFFLSMVVYFVTMHSHMAILFYP WQQYTAITPPYWETFANTVSGNFHIAWIMCCTVVVWQFETIWERYPFNLIKTDWLRRTASFFGIILIALALCFFLYYAQD LVWGQTVRGTRRLAAPDWRWLHVGEMAIFWLVPTLFLNFYCGNWPNNFSRPVRVCIRTFLTAALAVLVYVVYYKTSHLFL GTQKGFSHPQQFPMIPMIWLINIFLINVWFMDGWPGWKAVPRTAEELQEVEDEKVASDVRWSPALAKGLAVGIACGVGLY AVVVGVLPWIGQTVQIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57615; Mature: 57615
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRQTAEGVPGRPPSLAPTQVPFSAGEFLMDKDSTGILYLESRRLVKRWSGPWPALVNTL CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCHHHHHHCCCCCHHHHHHH VMAVFFYITWWIFQDPRGVFRLYTPYVGYMVCRWMLILFIWLAYIFDFWPFKRSWLERTH HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC PVVKGTVLTLVSVAAMFVLIKGFFIELLGNYGIAYFNPSRLEEMGITEFYALEYATEAIM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHCCCHHHHHHHHHHHHHH MFAAIASWLSPSWVVACEGAPWNKLKQPAKGLTIMVVTFFLSMVVYFVTMHSHMAILFYP HHHHHHHHCCCCEEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEC WQQYTAITPPYWETFANTVSGNFHIAWIMCCTVVVWQFETIWERYPFNLIKTDWLRRTAS HHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FFGIILIALALCFFLYYAQDLVWGQTVRGTRRLAAPDWRWLHVGEMAIFWLVPTLFLNFY HHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH CGNWPNNFSRPVRVCIRTFLTAALAVLVYVVYYKTSHLFLGTQKGFSHPQQFPMIPMIWL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHH INIFLINVWFMDGWPGWKAVPRTAEELQEVEDEKVASDVRWSPALAKGLAVGIACGVGLY HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH AVVVGVLPWIGQTVQIIK HHHHHHHHHCCCHHHHCC >Mature Secondary Structure MMRQTAEGVPGRPPSLAPTQVPFSAGEFLMDKDSTGILYLESRRLVKRWSGPWPALVNTL CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCHHHHHHCCCCCHHHHHHH VMAVFFYITWWIFQDPRGVFRLYTPYVGYMVCRWMLILFIWLAYIFDFWPFKRSWLERTH HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC PVVKGTVLTLVSVAAMFVLIKGFFIELLGNYGIAYFNPSRLEEMGITEFYALEYATEAIM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHCCCHHHHHHHHHHHHHH MFAAIASWLSPSWVVACEGAPWNKLKQPAKGLTIMVVTFFLSMVVYFVTMHSHMAILFYP HHHHHHHHCCCCEEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEC WQQYTAITPPYWETFANTVSGNFHIAWIMCCTVVVWQFETIWERYPFNLIKTDWLRRTAS HHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FFGIILIALALCFFLYYAQDLVWGQTVRGTRRLAAPDWRWLHVGEMAIFWLVPTLFLNFY HHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH CGNWPNNFSRPVRVCIRTFLTAALAVLVYVVYYKTSHLFLGTQKGFSHPQQFPMIPMIWL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHH INIFLINVWFMDGWPGWKAVPRTAEELQEVEDEKVASDVRWSPALAKGLAVGIACGVGLY HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH AVVVGVLPWIGQTVQIIK HHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA