Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78356659

Identifier: 78356659

GI number: 78356659

Start: 1664483

End: 1665640

Strand: Direct

Name: 78356659

Synonym: Dde_1616

Alternate gene names: NA

Gene position: 1664483-1665640 (Clockwise)

Preceding gene: 78356658

Following gene: 78356660

Centisome position: 44.62

GC content: 53.54

Gene sequence:

>1158_bases
ATGAAAGAAAACAATATGAGCCGGCGCGACTTTGTGAAAGGTGTGGCCACCGGTGTCTGCGCTGGTGCCTTTGCCTCCAT
GGGCCTTTATTCTTATACCGGTGCGGCCTACGACAGACTGCCCAAGTCGGAAAGAAAGTTTCATGATTTCGGTGCTGTGC
GCAGCGTGAAAGTTGTGAACATTTCCGAGACAAGCTGGTTCAGCAATGCTGACCTGATCGGAGACATTCATGCTGCCGGC
GGCCTGCTGGTAAACCAGTACACGCTTAACTGGGCACCTTTTGCCAATGGTAAAGGCACTGCAAAGGGTTCGTATGATTC
CGGTCTGGCAAGCATCAAAGATCTTATTCCCCATGATCTGGAAAAAGCGTGGGATATCCAGCGCAAGCTGGCTCTGCACC
CTGAAAACCCCGGCGGTTTTTCATGCCTGCTGGAAGTGGAAGCTCTGGACGGCACAAAGCATAATTACCTGCTGGACAGC
GGCTGGTCCTACGAATGGATGGATAAGAGCTTCAAGCGGGAAGGCATCGACAAGATGCTTGAGGCCCGGCAGATTGAGGG
GCTGTTCATTTCGCATGAACACTGGGATCATTTCTGGGGACTGCCCGTCACCATGAAGTATGACAACCGTATTCCGCTGT
ACATACACGACGGCTTTTACAAAGAAGGGCTGCAGTACATAAAGGACAGCGGGTACAAGGGCACACCTTTCATACAGAAG
GAACCCTTGCATCAGGTCATGCCGGGCATGGCAGTGGTGAAGTTCGATGTGCCCATCATCAACCGCGTGTTCGGCGAAAC
GTCTCTGGCCTTCAATGTGAAGGACAAAGGCCTTGTGCTCATCTCGGGTTGCTGCCATCAGGGCATTCTGCAGATGGCCG
ACTTTGCCTATACCGACCTTAAATACGATAATGACAAGTTCTACGGCATCTACGGCGGGCTGCACATATCGCCCTTCGAA
GACTGGGATCCCAAGTACGACGATCTGGTGATCTCGCTGGGCAAGTGGAACTTCGACCGCATCGGCTGCAACCATTGCAC
CGGCCACCTGACCGCCAGAAAGTTCATAGAGCGCGGCTATCCCGTGGTACGCGGGTCGGCGCGGTTCCGTTCGTCTTCGC
CTGATTATCTGGGCAACGGCGATACCATTACCTTCTAG

Upstream 100 bases:

>100_bases
TGCCTGCGGTGTGGGGCTGTATGCCGTAGTGGTGGGTGTCCTGCCGTGGATAGGGCAGACCGTGCAGATAATTAAATAAA
GGAAAGCGCAGGAGTATATG

Downstream 100 bases:

>100_bases
GCTGTGTAACCGGGCGGGGCATATGCTCCGCCCGTTTTCGGGTTTCGCTATGCTTACAGATTTTTTCATGCCGCCATCGG
GCGGGGCAGCCACAGCCGGC

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Beta-Lactamase-Like; Beta-Lactamase

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKENNMSRRDFVKGVATGVCAGAFASMGLYSYTGAAYDRLPKSERKFHDFGAVRSVKVVNISETSWFSNADLIGDIHAAG
GLLVNQYTLNWAPFANGKGTAKGSYDSGLASIKDLIPHDLEKAWDIQRKLALHPENPGGFSCLLEVEALDGTKHNYLLDS
GWSYEWMDKSFKREGIDKMLEARQIEGLFISHEHWDHFWGLPVTMKYDNRIPLYIHDGFYKEGLQYIKDSGYKGTPFIQK
EPLHQVMPGMAVVKFDVPIINRVFGETSLAFNVKDKGLVLISGCCHQGILQMADFAYTDLKYDNDKFYGIYGGLHISPFE
DWDPKYDDLVISLGKWNFDRIGCNHCTGHLTARKFIERGYPVVRGSARFRSSSPDYLGNGDTITF

Sequences:

>Translated_385_residues
MKENNMSRRDFVKGVATGVCAGAFASMGLYSYTGAAYDRLPKSERKFHDFGAVRSVKVVNISETSWFSNADLIGDIHAAG
GLLVNQYTLNWAPFANGKGTAKGSYDSGLASIKDLIPHDLEKAWDIQRKLALHPENPGGFSCLLEVEALDGTKHNYLLDS
GWSYEWMDKSFKREGIDKMLEARQIEGLFISHEHWDHFWGLPVTMKYDNRIPLYIHDGFYKEGLQYIKDSGYKGTPFIQK
EPLHQVMPGMAVVKFDVPIINRVFGETSLAFNVKDKGLVLISGCCHQGILQMADFAYTDLKYDNDKFYGIYGGLHISPFE
DWDPKYDDLVISLGKWNFDRIGCNHCTGHLTARKFIERGYPVVRGSARFRSSSPDYLGNGDTITF
>Mature_385_residues
MKENNMSRRDFVKGVATGVCAGAFASMGLYSYTGAAYDRLPKSERKFHDFGAVRSVKVVNISETSWFSNADLIGDIHAAG
GLLVNQYTLNWAPFANGKGTAKGSYDSGLASIKDLIPHDLEKAWDIQRKLALHPENPGGFSCLLEVEALDGTKHNYLLDS
GWSYEWMDKSFKREGIDKMLEARQIEGLFISHEHWDHFWGLPVTMKYDNRIPLYIHDGFYKEGLQYIKDSGYKGTPFIQK
EPLHQVMPGMAVVKFDVPIINRVFGETSLAFNVKDKGLVLISGCCHQGILQMADFAYTDLKYDNDKFYGIYGGLHISPFE
DWDPKYDDLVISLGKWNFDRIGCNHCTGHLTARKFIERGYPVVRGSARFRSSSPDYLGNGDTITF

Specific function: Unknown

COG id: COG1237

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43397; Mature: 43397

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENNMSRRDFVKGVATGVCAGAFASMGLYSYTGAAYDRLPKSERKFHDFGAVRSVKVVN
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHCCCHHHHHHHHCCEEEEEEEE
ISETSWFSNADLIGDIHAAGGLLVNQYTLNWAPFANGKGTAKGSYDSGLASIKDLIPHDL
ECCCCCCCCCCCEEEHHHCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
EKAWDIQRKLALHPENPGGFSCLLEVEALDGTKHNYLLDSGWSYEWMDKSFKREGIDKML
HHHHHHHHHEEECCCCCCCEEEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH
EARQIEGLFISHEHWDHFWGLPVTMKYDNRIPLYIHDGFYKEGLQYIKDSGYKGTPFIQK
HHHHHCCEEEECCCCHHHCCCEEEEEECCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCC
EPLHQVMPGMAVVKFDVPIINRVFGETSLAFNVKDKGLVLISGCCHQGILQMADFAYTDL
CCHHHHCCCCEEEEECCHHHHHHHCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHEE
KYDNDKFYGIYGGLHISPFEDWDPKYDDLVISLGKWNFDRIGCNHCTGHLTARKFIERGY
EECCCEEEEEECCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC
PVVRGSARFRSSSPDYLGNGDTITF
CEEECCCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MKENNMSRRDFVKGVATGVCAGAFASMGLYSYTGAAYDRLPKSERKFHDFGAVRSVKVVN
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHCCCHHHHHHHHCCEEEEEEEE
ISETSWFSNADLIGDIHAAGGLLVNQYTLNWAPFANGKGTAKGSYDSGLASIKDLIPHDL
ECCCCCCCCCCCEEEHHHCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
EKAWDIQRKLALHPENPGGFSCLLEVEALDGTKHNYLLDSGWSYEWMDKSFKREGIDKML
HHHHHHHHHEEECCCCCCCEEEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH
EARQIEGLFISHEHWDHFWGLPVTMKYDNRIPLYIHDGFYKEGLQYIKDSGYKGTPFIQK
HHHHHCCEEEECCCCHHHCCCEEEEEECCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCC
EPLHQVMPGMAVVKFDVPIINRVFGETSLAFNVKDKGLVLISGCCHQGILQMADFAYTDL
CCHHHHCCCCEEEEECCHHHHHHHCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHEE
KYDNDKFYGIYGGLHISPFEDWDPKYDDLVISLGKWNFDRIGCNHCTGHLTARKFIERGY
EECCCEEEEEECCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC
PVVRGSARFRSSSPDYLGNGDTITF
CEEECCCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA