| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356659
Identifier: 78356659
GI number: 78356659
Start: 1664483
End: 1665640
Strand: Direct
Name: 78356659
Synonym: Dde_1616
Alternate gene names: NA
Gene position: 1664483-1665640 (Clockwise)
Preceding gene: 78356658
Following gene: 78356660
Centisome position: 44.62
GC content: 53.54
Gene sequence:
>1158_bases ATGAAAGAAAACAATATGAGCCGGCGCGACTTTGTGAAAGGTGTGGCCACCGGTGTCTGCGCTGGTGCCTTTGCCTCCAT GGGCCTTTATTCTTATACCGGTGCGGCCTACGACAGACTGCCCAAGTCGGAAAGAAAGTTTCATGATTTCGGTGCTGTGC GCAGCGTGAAAGTTGTGAACATTTCCGAGACAAGCTGGTTCAGCAATGCTGACCTGATCGGAGACATTCATGCTGCCGGC GGCCTGCTGGTAAACCAGTACACGCTTAACTGGGCACCTTTTGCCAATGGTAAAGGCACTGCAAAGGGTTCGTATGATTC CGGTCTGGCAAGCATCAAAGATCTTATTCCCCATGATCTGGAAAAAGCGTGGGATATCCAGCGCAAGCTGGCTCTGCACC CTGAAAACCCCGGCGGTTTTTCATGCCTGCTGGAAGTGGAAGCTCTGGACGGCACAAAGCATAATTACCTGCTGGACAGC GGCTGGTCCTACGAATGGATGGATAAGAGCTTCAAGCGGGAAGGCATCGACAAGATGCTTGAGGCCCGGCAGATTGAGGG GCTGTTCATTTCGCATGAACACTGGGATCATTTCTGGGGACTGCCCGTCACCATGAAGTATGACAACCGTATTCCGCTGT ACATACACGACGGCTTTTACAAAGAAGGGCTGCAGTACATAAAGGACAGCGGGTACAAGGGCACACCTTTCATACAGAAG GAACCCTTGCATCAGGTCATGCCGGGCATGGCAGTGGTGAAGTTCGATGTGCCCATCATCAACCGCGTGTTCGGCGAAAC GTCTCTGGCCTTCAATGTGAAGGACAAAGGCCTTGTGCTCATCTCGGGTTGCTGCCATCAGGGCATTCTGCAGATGGCCG ACTTTGCCTATACCGACCTTAAATACGATAATGACAAGTTCTACGGCATCTACGGCGGGCTGCACATATCGCCCTTCGAA GACTGGGATCCCAAGTACGACGATCTGGTGATCTCGCTGGGCAAGTGGAACTTCGACCGCATCGGCTGCAACCATTGCAC CGGCCACCTGACCGCCAGAAAGTTCATAGAGCGCGGCTATCCCGTGGTACGCGGGTCGGCGCGGTTCCGTTCGTCTTCGC CTGATTATCTGGGCAACGGCGATACCATTACCTTCTAG
Upstream 100 bases:
>100_bases TGCCTGCGGTGTGGGGCTGTATGCCGTAGTGGTGGGTGTCCTGCCGTGGATAGGGCAGACCGTGCAGATAATTAAATAAA GGAAAGCGCAGGAGTATATG
Downstream 100 bases:
>100_bases GCTGTGTAACCGGGCGGGGCATATGCTCCGCCCGTTTTCGGGTTTCGCTATGCTTACAGATTTTTTCATGCCGCCATCGG GCGGGGCAGCCACAGCCGGC
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Beta-Lactamase-Like; Beta-Lactamase
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MKENNMSRRDFVKGVATGVCAGAFASMGLYSYTGAAYDRLPKSERKFHDFGAVRSVKVVNISETSWFSNADLIGDIHAAG GLLVNQYTLNWAPFANGKGTAKGSYDSGLASIKDLIPHDLEKAWDIQRKLALHPENPGGFSCLLEVEALDGTKHNYLLDS GWSYEWMDKSFKREGIDKMLEARQIEGLFISHEHWDHFWGLPVTMKYDNRIPLYIHDGFYKEGLQYIKDSGYKGTPFIQK EPLHQVMPGMAVVKFDVPIINRVFGETSLAFNVKDKGLVLISGCCHQGILQMADFAYTDLKYDNDKFYGIYGGLHISPFE DWDPKYDDLVISLGKWNFDRIGCNHCTGHLTARKFIERGYPVVRGSARFRSSSPDYLGNGDTITF
Sequences:
>Translated_385_residues MKENNMSRRDFVKGVATGVCAGAFASMGLYSYTGAAYDRLPKSERKFHDFGAVRSVKVVNISETSWFSNADLIGDIHAAG GLLVNQYTLNWAPFANGKGTAKGSYDSGLASIKDLIPHDLEKAWDIQRKLALHPENPGGFSCLLEVEALDGTKHNYLLDS GWSYEWMDKSFKREGIDKMLEARQIEGLFISHEHWDHFWGLPVTMKYDNRIPLYIHDGFYKEGLQYIKDSGYKGTPFIQK EPLHQVMPGMAVVKFDVPIINRVFGETSLAFNVKDKGLVLISGCCHQGILQMADFAYTDLKYDNDKFYGIYGGLHISPFE DWDPKYDDLVISLGKWNFDRIGCNHCTGHLTARKFIERGYPVVRGSARFRSSSPDYLGNGDTITF >Mature_385_residues MKENNMSRRDFVKGVATGVCAGAFASMGLYSYTGAAYDRLPKSERKFHDFGAVRSVKVVNISETSWFSNADLIGDIHAAG GLLVNQYTLNWAPFANGKGTAKGSYDSGLASIKDLIPHDLEKAWDIQRKLALHPENPGGFSCLLEVEALDGTKHNYLLDS GWSYEWMDKSFKREGIDKMLEARQIEGLFISHEHWDHFWGLPVTMKYDNRIPLYIHDGFYKEGLQYIKDSGYKGTPFIQK EPLHQVMPGMAVVKFDVPIINRVFGETSLAFNVKDKGLVLISGCCHQGILQMADFAYTDLKYDNDKFYGIYGGLHISPFE DWDPKYDDLVISLGKWNFDRIGCNHCTGHLTARKFIERGYPVVRGSARFRSSSPDYLGNGDTITF
Specific function: Unknown
COG id: COG1237
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43397; Mature: 43397
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKENNMSRRDFVKGVATGVCAGAFASMGLYSYTGAAYDRLPKSERKFHDFGAVRSVKVVN CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHCCCHHHHHHHHCCEEEEEEEE ISETSWFSNADLIGDIHAAGGLLVNQYTLNWAPFANGKGTAKGSYDSGLASIKDLIPHDL ECCCCCCCCCCCEEEHHHCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH EKAWDIQRKLALHPENPGGFSCLLEVEALDGTKHNYLLDSGWSYEWMDKSFKREGIDKML HHHHHHHHHEEECCCCCCCEEEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH EARQIEGLFISHEHWDHFWGLPVTMKYDNRIPLYIHDGFYKEGLQYIKDSGYKGTPFIQK HHHHHCCEEEECCCCHHHCCCEEEEEECCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCC EPLHQVMPGMAVVKFDVPIINRVFGETSLAFNVKDKGLVLISGCCHQGILQMADFAYTDL CCHHHHCCCCEEEEECCHHHHHHHCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHEE KYDNDKFYGIYGGLHISPFEDWDPKYDDLVISLGKWNFDRIGCNHCTGHLTARKFIERGY EECCCEEEEEECCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC PVVRGSARFRSSSPDYLGNGDTITF CEEECCCCCCCCCCCCCCCCCEECC >Mature Secondary Structure MKENNMSRRDFVKGVATGVCAGAFASMGLYSYTGAAYDRLPKSERKFHDFGAVRSVKVVN CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHCCCHHHHHHHHCCEEEEEEEE ISETSWFSNADLIGDIHAAGGLLVNQYTLNWAPFANGKGTAKGSYDSGLASIKDLIPHDL ECCCCCCCCCCCEEEHHHCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH EKAWDIQRKLALHPENPGGFSCLLEVEALDGTKHNYLLDSGWSYEWMDKSFKREGIDKML HHHHHHHHHEEECCCCCCCEEEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH EARQIEGLFISHEHWDHFWGLPVTMKYDNRIPLYIHDGFYKEGLQYIKDSGYKGTPFIQK HHHHHCCEEEECCCCHHHCCCEEEEEECCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCC EPLHQVMPGMAVVKFDVPIINRVFGETSLAFNVKDKGLVLISGCCHQGILQMADFAYTDL CCHHHHCCCCEEEEECCHHHHHHHCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHEE KYDNDKFYGIYGGLHISPFEDWDPKYDDLVISLGKWNFDRIGCNHCTGHLTARKFIERGY EECCCEEEEEECCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC PVVRGSARFRSSSPDYLGNGDTITF CEEECCCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA