| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356629
Identifier: 78356629
GI number: 78356629
Start: 1610776
End: 1611897
Strand: Reverse
Name: 78356629
Synonym: Dde_1586
Alternate gene names: NA
Gene position: 1611897-1610776 (Counterclockwise)
Preceding gene: 78356630
Following gene: 78356622
Centisome position: 43.21
GC content: 52.58
Gene sequence:
>1122_bases ATGGTTTTTCCAAACCTTAAAATCGGCGACATCGTCGCCAGAGTTCCTATTATCCAGGGAGGGATGGGTGTAGGAATCTC GCTTTCCGGTCTGGCAAGCGCCGTAGCCAACGAGGGCGGCATAGGCGTAATTGCCGGTGCCATGATTGGCATGAACGAAC CGGACGTGGCTAAAAATCCGCTTGAGGCGAACATCCGCGCCTTGCGCAAAGAAATACGCAAAGCCAAAGAGATGACCAGA GGCATCCTCGGCGTTAACATTATGGTTGCGCTGACCAATTTTGCCGATCTGGTAAAAACATCCATCGACGAAAAAATCGA TGTGATTTTCTCCGGTGCCGGACTGCCGCTTGAACTGCCCAGATACCTTAAAGAAGCCAGTGAACAGGGCAAGGAAGAAG TGCGCACCAAACTGGTGCCCATTGTATCCTCTGCACGCGCGGCTTCAATCATCTGCAAAAAATGGCTGAACCGATTTGAC TACCTGCCCGATGCCTTTGTGGTGGAAGGTCCCAAAGCAGGCGGACATCTGGGTTTTAAGCCCGAAGAGCTTGATGACCC CGAGTTTGCGCTTGAAAAAGTCATTCCGCAGGTCATTGAAGCTGTAAAACCCTTTGAAGCACAGCGTAACAGACGTATTC CGGTGATTGCCGCAGGCGGTGTGTACAGCGGCGACGACATCCGCAGCTACATCGATATGGGCGCAGCCGGTGTACAGATG GGCACCCGTTTTGTGGCCACGCATGAATGCGACGCCGACGACCGCTTTAAGCAGGCGTATGTCGATGCAAAACAGGAAGA TGTGGTTGTGATAAAAAGCCCTGTGGGCATGCCCGGCAGAGCCATACGCAGCCAGTTTGTAAAAGATGTGGATGAAGGCA GACGCCAGCCCGTCAAATGCGCCTTCCACTGCATACATTCCTGCAAAGTGGAAAAAAGCCCATACTGCATAGCTGCCGCA CTGTTAAACGCCAAAAAAGGCAACCTCAACAAAGGGTTCGCTTTTTCGGGCACCAATGTTCATCGTGTGGACAAAATACA GTCGGTAAAAGAGCTTGTGGACTCGCTCAAAGAAGAGTTCGAGGCCTCACGGCTGTCGCACCCCCTTCCCCGGACAAGCT GA
Upstream 100 bases:
>100_bases GATAGGTGCGTCCACCGGACGCCCTGCCCTTCCGCTGTCGTTCCCGACGGACCGGCAGCATCATCATAAGGGGCTGTTCT GCCCCACGGAGGACTGAATC
Downstream 100 bases:
>100_bases TACAAAGCGCTCCCGAAAGGGGGCGCTTTTTTTTGCAGCCGCCGGCCCGCAGCGTAAAATTCCCCGGCAAAACAGCAGTA GACTGGTCAGCCCCCCCGCT
Product: 2-nitropropane dioxygenase family oxidoreductase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MVFPNLKIGDIVARVPIIQGGMGVGISLSGLASAVANEGGIGVIAGAMIGMNEPDVAKNPLEANIRALRKEIRKAKEMTR GILGVNIMVALTNFADLVKTSIDEKIDVIFSGAGLPLELPRYLKEASEQGKEEVRTKLVPIVSSARAASIICKKWLNRFD YLPDAFVVEGPKAGGHLGFKPEELDDPEFALEKVIPQVIEAVKPFEAQRNRRIPVIAAGGVYSGDDIRSYIDMGAAGVQM GTRFVATHECDADDRFKQAYVDAKQEDVVVIKSPVGMPGRAIRSQFVKDVDEGRRQPVKCAFHCIHSCKVEKSPYCIAAA LLNAKKGNLNKGFAFSGTNVHRVDKIQSVKELVDSLKEEFEASRLSHPLPRTS
Sequences:
>Translated_373_residues MVFPNLKIGDIVARVPIIQGGMGVGISLSGLASAVANEGGIGVIAGAMIGMNEPDVAKNPLEANIRALRKEIRKAKEMTR GILGVNIMVALTNFADLVKTSIDEKIDVIFSGAGLPLELPRYLKEASEQGKEEVRTKLVPIVSSARAASIICKKWLNRFD YLPDAFVVEGPKAGGHLGFKPEELDDPEFALEKVIPQVIEAVKPFEAQRNRRIPVIAAGGVYSGDDIRSYIDMGAAGVQM GTRFVATHECDADDRFKQAYVDAKQEDVVVIKSPVGMPGRAIRSQFVKDVDEGRRQPVKCAFHCIHSCKVEKSPYCIAAA LLNAKKGNLNKGFAFSGTNVHRVDKIQSVKELVDSLKEEFEASRLSHPLPRTS >Mature_373_residues MVFPNLKIGDIVARVPIIQGGMGVGISLSGLASAVANEGGIGVIAGAMIGMNEPDVAKNPLEANIRALRKEIRKAKEMTR GILGVNIMVALTNFADLVKTSIDEKIDVIFSGAGLPLELPRYLKEASEQGKEEVRTKLVPIVSSARAASIICKKWLNRFD YLPDAFVVEGPKAGGHLGFKPEELDDPEFALEKVIPQVIEAVKPFEAQRNRRIPVIAAGGVYSGDDIRSYIDMGAAGVQM GTRFVATHECDADDRFKQAYVDAKQEDVVVIKSPVGMPGRAIRSQFVKDVDEGRRQPVKCAFHCIHSCKVEKSPYCIAAA LLNAKKGNLNKGFAFSGTNVHRVDKIQSVKELVDSLKEEFEASRLSHPLPRTS
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 40491; Mature: 40491
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFPNLKIGDIVARVPIIQGGMGVGISLSGLASAVANEGGIGVIAGAMIGMNEPDVAKNP CCCCCCCHHHHHHHCCCEECCCCCCEEHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCC LEANIRALRKEIRKAKEMTRGILGVNIMVALTNFADLVKTSIDEKIDVIFSGAGLPLELP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHH RYLKEASEQGKEEVRTKLVPIVSSARAASIICKKWLNRFDYLPDAFVVEGPKAGGHLGFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC PEELDDPEFALEKVIPQVIEAVKPFEAQRNRRIPVIAAGGVYSGDDIRSYIDMGAAGVQM CCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCHHHHHHHHCCHHHHHH GTRFVATHECDADDRFKQAYVDAKQEDVVVIKSPVGMPGRAIRSQFVKDVDEGRRQPVKC CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHH AFHCIHSCKVEKSPYCIAAALLNAKKGNLNKGFAFSGTNVHRVDKIQSVKELVDSLKEEF HHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH EASRLSHPLPRTS HHHHHCCCCCCCC >Mature Secondary Structure MVFPNLKIGDIVARVPIIQGGMGVGISLSGLASAVANEGGIGVIAGAMIGMNEPDVAKNP CCCCCCCHHHHHHHCCCEECCCCCCEEHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCC LEANIRALRKEIRKAKEMTRGILGVNIMVALTNFADLVKTSIDEKIDVIFSGAGLPLELP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHH RYLKEASEQGKEEVRTKLVPIVSSARAASIICKKWLNRFDYLPDAFVVEGPKAGGHLGFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC PEELDDPEFALEKVIPQVIEAVKPFEAQRNRRIPVIAAGGVYSGDDIRSYIDMGAAGVQM CCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCHHHHHHHHCCHHHHHH GTRFVATHECDADDRFKQAYVDAKQEDVVVIKSPVGMPGRAIRSQFVKDVDEGRRQPVKC CCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHH AFHCIHSCKVEKSPYCIAAALLNAKKGNLNKGFAFSGTNVHRVDKIQSVKELVDSLKEEF HHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH EASRLSHPLPRTS HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA