| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356622
Identifier: 78356622
GI number: 78356622
Start: 1604151
End: 1605104
Strand: Reverse
Name: 78356622
Synonym: Dde_1579
Alternate gene names: NA
Gene position: 1605104-1604151 (Counterclockwise)
Preceding gene: 78356629
Following gene: 78356613
Centisome position: 43.03
GC content: 58.39
Gene sequence:
>954_bases ATGACCCCGCTTATAACCGACCCGCTTCAGCCGGTGTTTGTGATTGCCGGAGCCGCCTTCTGCGTATGTCTGATGGCCAC CATATGCTCACCTGCACTCACCCTTTTCAGTCAGATACTGGCTTCTGCGCAAAAAAAAGTTTTTTACGATAAATTTGCCC GCCAGCTTGCCACCATGGCCACTACGCTGGGGGTTTTGTGCTTCACCACCATGGCCGCAGGCATCCTGCACACCGCACTG GAAGAACCGGCTTTATTCGAAGGTCCGCTACGCCTGCCGCTCATGGCGGCTCTGGGCACCCTCACTCTGGCGTTCGCGCT GCAGGTCATCTATTCCCTCACATGGAATTCCCTTAAAAAGAACAAAGCCCTCCACAGGCTTTTCGGGCTGTTTGCCGGTC TGTCCATGTTCACGGCGGTCTTCCTTTCGCTGGGGCTCAAGCGCACAGTACTGGCCGCAGGGCTCAGTATTCCTTCCAGC GCTCCCGCGCTGGACACGTTTCTCGCTGTCTACTCCATTCCTGCACAATCTGTTTTCTGGCCCCTGCTTGCTCAGGCCCT TCTTGCCGGTACCGGGGCAGCGGGCGCGCTGGGACTTTGCTATCTGCTGCTGCGGCGCGAGGCAGACAACTACGGGCGCG ATTACTACAATTTCAGCACAGCCTACTGTGCCCGCTGTGCGCTGATTCCCTCCCTGCTGCAGACCATACCTGCAGCGCTC CTGCTGTGGATGTCGCAGCCGGTGCTTTCACCTTTTGCACTGGAAAATCCTTTTGTGCTGCTGTGGGCGGCAGGCATAGC AATACCCCTGCTGGCCTGCGCGGGGTGGATGATTGTTGCGGTCAGCGCCGCCCCGCTGCGTCATAAACCGGCCATGATAA CAGCGCCTGTGCTGCTGGTGGCAGGTTATGCCGTCCAGATGTTCGCCGCATTGCGCGTTTACGCGCTTATCTAG
Upstream 100 bases:
>100_bases CCCCCGAAACTTGCATGAAACGGCTTTTTAAGGCAAAAGACCCATGCCGCACCCTGCGGCGCGCCAACACGGTGAACGCC ACCAAGGAGCCTGTTTCATA
Downstream 100 bases:
>100_bases TCCGGACATTGAAACAACACAAAAGCCGGTGCAGCGTTTGCTCACCGGCTTTTGTGTTGTTGAGTATCCCCGTGCGGGCC GCTGCTCAGCTGCAGACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTPLITDPLQPVFVIAGAAFCVCLMATICSPALTLFSQILASAQKKVFYDKFARQLATMATTLGVLCFTTMAAGILHTAL EEPALFEGPLRLPLMAALGTLTLAFALQVIYSLTWNSLKKNKALHRLFGLFAGLSMFTAVFLSLGLKRTVLAAGLSIPSS APALDTFLAVYSIPAQSVFWPLLAQALLAGTGAAGALGLCYLLLRREADNYGRDYYNFSTAYCARCALIPSLLQTIPAAL LLWMSQPVLSPFALENPFVLLWAAGIAIPLLACAGWMIVAVSAAPLRHKPAMITAPVLLVAGYAVQMFAALRVYALI
Sequences:
>Translated_317_residues MTPLITDPLQPVFVIAGAAFCVCLMATICSPALTLFSQILASAQKKVFYDKFARQLATMATTLGVLCFTTMAAGILHTAL EEPALFEGPLRLPLMAALGTLTLAFALQVIYSLTWNSLKKNKALHRLFGLFAGLSMFTAVFLSLGLKRTVLAAGLSIPSS APALDTFLAVYSIPAQSVFWPLLAQALLAGTGAAGALGLCYLLLRREADNYGRDYYNFSTAYCARCALIPSLLQTIPAAL LLWMSQPVLSPFALENPFVLLWAAGIAIPLLACAGWMIVAVSAAPLRHKPAMITAPVLLVAGYAVQMFAALRVYALI >Mature_316_residues TPLITDPLQPVFVIAGAAFCVCLMATICSPALTLFSQILASAQKKVFYDKFARQLATMATTLGVLCFTTMAAGILHTALE EPALFEGPLRLPLMAALGTLTLAFALQVIYSLTWNSLKKNKALHRLFGLFAGLSMFTAVFLSLGLKRTVLAAGLSIPSSA PALDTFLAVYSIPAQSVFWPLLAQALLAGTGAAGALGLCYLLLRREADNYGRDYYNFSTAYCARCALIPSLLQTIPAALL LWMSQPVLSPFALENPFVLLWAAGIAIPLLACAGWMIVAVSAAPLRHKPAMITAPVLLVAGYAVQMFAALRVYALI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33808; Mature: 33677
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLITDPLQPVFVIAGAAFCVCLMATICSPALTLFSQILASAQKKVFYDKFARQLATMA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTLGVLCFTTMAAGILHTALEEPALFEGPLRLPLMAALGTLTLAFALQVIYSLTWNSLKK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKALHRLFGLFAGLSMFTAVFLSLGLKRTVLAAGLSIPSSAPALDTFLAVYSIPAQSVFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHH PLLAQALLAGTGAAGALGLCYLLLRREADNYGRDYYNFSTAYCARCALIPSLLQTIPAAL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLWMSQPVLSPFALENPFVLLWAAGIAIPLLACAGWMIVAVSAAPLRHKPAMITAPVLLV HHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH AGYAVQMFAALRVYALI HHHHHHHHHHHHHHHCC >Mature Secondary Structure TPLITDPLQPVFVIAGAAFCVCLMATICSPALTLFSQILASAQKKVFYDKFARQLATMA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTLGVLCFTTMAAGILHTALEEPALFEGPLRLPLMAALGTLTLAFALQVIYSLTWNSLKK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKALHRLFGLFAGLSMFTAVFLSLGLKRTVLAAGLSIPSSAPALDTFLAVYSIPAQSVFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHH PLLAQALLAGTGAAGALGLCYLLLRREADNYGRDYYNFSTAYCARCALIPSLLQTIPAAL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLWMSQPVLSPFALENPFVLLWAAGIAIPLLACAGWMIVAVSAAPLRHKPAMITAPVLLV HHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH AGYAVQMFAALRVYALI HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA