| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is cusR [C]
Identifier: 78356627
GI number: 78356627
Start: 1608727
End: 1609686
Strand: Direct
Name: cusR [C]
Synonym: Dde_1584
Alternate gene names: 78356627
Gene position: 1608727-1609686 (Clockwise)
Preceding gene: 78356626
Following gene: 78356628
Centisome position: 43.13
GC content: 54.17
Gene sequence:
>960_bases ATGCCGCAGTTAGGAGACGGACAGATGGCCCGCTGTATGCGTGCCTTTCTGCTTACGTGCGATCCGGCCCTGCCCGGCAC CGTGTCGGCGTTATGGCCTTCCGAAGTCATACGCTGGACTGTTTTTGAGCGGGGGGCCGCTGCTCTTGAATCGCTTTTTT CCGAGCCGCCTGATCTGGTGCTGGTGGATATGCAGCTTGCCGACATGCAGGGAACTGACCTTGTCCGCATGATGAAAAGC GAGAATGTATACCGCCATATACCGGTAGTGCTTTTTGTTCCGTCTGCCGTTCTGGAGCAAGGCATGGACTGGTCGCTGGT GGAGGCCGATGATTTTCTTGTACGCCCGTGCGGTCCTGCCGAGTTGCAGGCACGGGTGGAACTGACCATAAGCCGGGCTT CGCGGTCGCTGGACGCCAACCCGCTTACAAGACTGCCGGGCAACACCTCCATCATTCACTTTATTCAGGAACAGCTCGAT AAAAAAGCGGACTATGCCTTCGGGTATGCCGATCTGGATCATTTCAAGTCGTTCAATGACAAATACGGTTTTTCGCGCGG TGATGAAGCCCTGATGATGACTGCGCGGATTATTGTCAACATTATAAAGGCATATGCGGGTACGGTATCCTTTGTTGGGC ATGTGGGCGGGGATGATTTTGTCTTCGGCCTGCCGGAGGATTGTATCGAAAGTGCCTGCCAGCGGATTGTGTCGAGTTTC GATTCCATCGTACCGCATTTTTATGATGCGGAAGACAGAGCACGCTCGGGTATAGTTTCCACAGACAGGCAGGGAAACGT GTGTTCGTTTCCGTTGATGGCCATCTCCATTGCTGTTGTGATGAACACGGGCGGAAGGCTGCAGCATTATGGCGAGGTGT CTGCCATTGCCTCTGCTCTGAAGAAGAAAGCAAAGGAAGATCCACGGAGTAATTATGTCATGGACAGGCGGCGCGCCTGA
Upstream 100 bases:
>100_bases AAGCTGCTTAAGCTGAACCAGCGGATGCTGGAACAGGTGCTCGACGCATTGTGCGCCAAGTTTATTGAAGTGGCTGATCT TAAACTGGGATAGGCAAGAC
Downstream 100 bases:
>100_bases TTTCAACCTGCCACCTCTGCCGGATACGGCCGAAATGTATATGGGGTATCTTGCGCTGGAAAAGGGCTATTCTTCAGCTA CAGTGCGCGGGTATGCGTGT
Product: response regulator receiver modulated diguanylate cyclase
Products: NA
Alternate protein names: Response Regulator Receiver Modulated Diguanylate Cyclase; Diguanylate Cyclase; GGDEF Domain-Containing Protein; Two-Component Response Regulator; EAL/GGDEF Domain-Containing Protein; GGDEF Domain Protein; Signaling Protein; Response Regulator Receiver; Cyclic Diguanylate Phosphodiesterase Domain Protein; Signal Transduction Protein; Sensory Box/GGDEF Family Protein; Response Regulator Receiver Protein; Response Regulatory Protein; GGDEF/EAL Sensory Box Protein; Histidine Kinase; Response Regulator/GGDEF Domain-Containing Protein; Two-Component System Response Regulator Receiver; Response Regulator; EAL Domain Protein; Sensor Protein; Sensory Box Histidine Kinase/Response Regulator; Diguanylate Cyclase/Phosphodiesterase Family Protein; Ggdef Domain Protein; Signal Protein; EAL Domain/GGDEF Domain-Containing Protein; CheY-Like Response Regulator Modulated Diguanylate Cyclase; Response Regulator Protein; GGDEFCBS:EAL Domain-Containing Protein; GGDEF Domain/HAMP Domain-Containing Protein; EAL Domain-Containing; Eal/Ggdef Domain Protein
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MPQLGDGQMARCMRAFLLTCDPALPGTVSALWPSEVIRWTVFERGAAALESLFSEPPDLVLVDMQLADMQGTDLVRMMKS ENVYRHIPVVLFVPSAVLEQGMDWSLVEADDFLVRPCGPAELQARVELTISRASRSLDANPLTRLPGNTSIIHFIQEQLD KKADYAFGYADLDHFKSFNDKYGFSRGDEALMMTARIIVNIIKAYAGTVSFVGHVGGDDFVFGLPEDCIESACQRIVSSF DSIVPHFYDAEDRARSGIVSTDRQGNVCSFPLMAISIAVVMNTGGRLQHYGEVSAIASALKKKAKEDPRSNYVMDRRRA
Sequences:
>Translated_319_residues MPQLGDGQMARCMRAFLLTCDPALPGTVSALWPSEVIRWTVFERGAAALESLFSEPPDLVLVDMQLADMQGTDLVRMMKS ENVYRHIPVVLFVPSAVLEQGMDWSLVEADDFLVRPCGPAELQARVELTISRASRSLDANPLTRLPGNTSIIHFIQEQLD KKADYAFGYADLDHFKSFNDKYGFSRGDEALMMTARIIVNIIKAYAGTVSFVGHVGGDDFVFGLPEDCIESACQRIVSSF DSIVPHFYDAEDRARSGIVSTDRQGNVCSFPLMAISIAVVMNTGGRLQHYGEVSAIASALKKKAKEDPRSNYVMDRRRA >Mature_318_residues PQLGDGQMARCMRAFLLTCDPALPGTVSALWPSEVIRWTVFERGAAALESLFSEPPDLVLVDMQLADMQGTDLVRMMKSE NVYRHIPVVLFVPSAVLEQGMDWSLVEADDFLVRPCGPAELQARVELTISRASRSLDANPLTRLPGNTSIIHFIQEQLDK KADYAFGYADLDHFKSFNDKYGFSRGDEALMMTARIIVNIIKAYAGTVSFVGHVGGDDFVFGLPEDCIESACQRIVSSFD SIVPHFYDAEDRARSGIVSTDRQGNVCSFPLMAISIAVVMNTGGRLQHYGEVSAIASALKKKAKEDPRSNYVMDRRRA
Specific function: Probable Member Of A Two-Component Regulatory System Ybcz/Ylca. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35268; Mature: 35137
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQLGDGQMARCMRAFLLTCDPALPGTVSALWPSEVIRWTVFERGAAALESLFSEPPDLV CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEE LVDMQLADMQGTDLVRMMKSENVYRHIPVVLFVPSAVLEQGMDWSLVEADDFLVRPCGPA EEEEEECCCCCHHHHHHHHHCCHHHHCCEEEEECHHHHHCCCCEEEEECCCEEECCCCCH ELQARVELTISRASRSLDANPLTRLPGNTSIIHFIQEQLDKKADYAFGYADLDHFKSFND HHHHHHEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEECHHHHHHHHCCCC KYGFSRGDEALMMTARIIVNIIKAYAGTVSFVGHVGGDDFVFGLPEDCIESACQRIVSSF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHH DSIVPHFYDAEDRARSGIVSTDRQGNVCSFPLMAISIAVVMNTGGRLQHYGEVSAIASAL HHHCCCCCCCHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KKKAKEDPRSNYVMDRRRA HHHHHCCCCCCCCHHCCCC >Mature Secondary Structure PQLGDGQMARCMRAFLLTCDPALPGTVSALWPSEVIRWTVFERGAAALESLFSEPPDLV CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEE LVDMQLADMQGTDLVRMMKSENVYRHIPVVLFVPSAVLEQGMDWSLVEADDFLVRPCGPA EEEEEECCCCCHHHHHHHHHCCHHHHCCEEEEECHHHHHCCCCEEEEECCCEEECCCCCH ELQARVELTISRASRSLDANPLTRLPGNTSIIHFIQEQLDKKADYAFGYADLDHFKSFND HHHHHHEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEECHHHHHHHHCCCC KYGFSRGDEALMMTARIIVNIIKAYAGTVSFVGHVGGDDFVFGLPEDCIESACQRIVSSF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHH DSIVPHFYDAEDRARSGIVSTDRQGNVCSFPLMAISIAVVMNTGGRLQHYGEVSAIASAL HHHCCCCCCCHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KKKAKEDPRSNYVMDRRRA HHHHHCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA