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The map label for this gene is ytxD [H]

Identifier: 78356581

GI number: 78356581

Start: 1557218

End: 1557973

Strand: Direct

Name: ytxD [H]

Synonym: Dde_1538

Alternate gene names: 78356581

Gene position: 1557218-1557973 (Clockwise)

Preceding gene: 78356579

Following gene: 78356582

Centisome position: 41.75

GC content: 53.97

Gene sequence:

>756_bases
ATGGATATAGCAACTCTTTTCGGGATTATTGCCGGGTTCGGCCTTGTGGTCGGCGCTATCTTTATGGGGGGCAATTTTGC
CGACTTTGTCAACCTGCCGGGGCTGATGATCGTTTTCGGCGGCACGGGAGCCGCCATTCTGGTCACTTTTCCTTTTGAAG
AAGTGGTGCAGGCCGTGAAAGGGGGGCTGCAGGTTTTCGGCGCCAGAAACGTGAAAAACCGTGATGTGGTCAATACCATG
GTACGTGTGGCTGAAATTAGCCGCCGTGAGGGGCTGACCGCTCTGGAACACATAAAAACCGAAAACAGCCTGCTGAAAAA
AGCCTGCCAGCTGATAGCCGACAATGCCGACCATGCGCTTATACGCGATACTGTGATGATTGAAATCGCCACCATGCGCA
GACGGCACAACGTGTCCATAGCCGTGTTCAACCGGCTGGGGGCGTTTGCACCGGCGTTCGGTATGATAGGCACGCTTATC
GGTCTGGTGCAGATGCTTACCCGTCTCAACGACCCTGCCGCCATCGGTCCGGCCATGGCTGTGGCCATTTTGACCACGTT
TTACGGGGCGTTGATGGCCAATCTGCTTTTTTTACCCATCGCCGGCAAACTGAAAGCCCGCACCCTGCAGGAAGAAGTGC
ACCTTTTTATCATTTTCGAAGGGGCAAAATCCATACTGGAGAATAACAACCCGCGTCTGGTGCATGAAAAGCTTTCGTCA
TTCCTTTCACCTCAGGAGCGCCGGAGTGTCCGATAA

Upstream 100 bases:

>100_bases
AGGGACGCGATCATACTTCTGCGATCGGTTCATGGATGGCCTGCGCCTTCATGGCCGGTCTTCCTGCCTTTTTACCAGTT
GCGGAGCTTAGACCGAACAT

Downstream 100 bases:

>100_bases
GGATCTGCCTTTTTCCCTGATAGAGCAGGAAGAAGAGGACCGCACCGACGAGTGGATTGTCACATTTGCCGATCTCGCCA
CGCTGCTGCTTGTTTTTTTC

Product: chemotaxis protein MotA

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDIATLFGIIAGFGLVVGAIFMGGNFADFVNLPGLMIVFGGTGAAILVTFPFEEVVQAVKGGLQVFGARNVKNRDVVNTM
VRVAEISRREGLTALEHIKTENSLLKKACQLIADNADHALIRDTVMIEIATMRRRHNVSIAVFNRLGAFAPAFGMIGTLI
GLVQMLTRLNDPAAIGPAMAVAILTTFYGALMANLLFLPIAGKLKARTLQEEVHLFIIFEGAKSILENNNPRLVHEKLSS
FLSPQERRSVR

Sequences:

>Translated_251_residues
MDIATLFGIIAGFGLVVGAIFMGGNFADFVNLPGLMIVFGGTGAAILVTFPFEEVVQAVKGGLQVFGARNVKNRDVVNTM
VRVAEISRREGLTALEHIKTENSLLKKACQLIADNADHALIRDTVMIEIATMRRRHNVSIAVFNRLGAFAPAFGMIGTLI
GLVQMLTRLNDPAAIGPAMAVAILTTFYGALMANLLFLPIAGKLKARTLQEEVHLFIIFEGAKSILENNNPRLVHEKLSS
FLSPQERRSVR
>Mature_251_residues
MDIATLFGIIAGFGLVVGAIFMGGNFADFVNLPGLMIVFGGTGAAILVTFPFEEVVQAVKGGLQVFGARNVKNRDVVNTM
VRVAEISRREGLTALEHIKTENSLLKKACQLIADNADHALIRDTVMIEIATMRRRHNVSIAVFNRLGAFAPAFGMIGTLI
GLVQMLTRLNDPAAIGPAMAVAILTTFYGALMANLLFLPIAGKLKARTLQEEVHLFIIFEGAKSILENNNPRLVHEKLSS
FLSPQERRSVR

Specific function: May be involved in some transport function [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 27231; Mature: 27231

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIATLFGIIAGFGLVVGAIFMGGNFADFVNLPGLMIVFGGTGAAILVTFPFEEVVQAVK
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCEEEEECCHHHHHHHHH
GGLQVFGARNVKNRDVVNTMVRVAEISRREGLTALEHIKTENSLLKKACQLIADNADHAL
CCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IRDTVMIEIATMRRRHNVSIAVFNRLGAFAPAFGMIGTLIGLVQMLTRLNDPAAIGPAMA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VAILTTFYGALMANLLFLPIAGKLKARTLQEEVHLFIIFEGAKSILENNNPRLVHEKLSS
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCEEEEEECCHHHHHHCCCCHHHHHHHHH
FLSPQERRSVR
HCCCHHHCCCC
>Mature Secondary Structure
MDIATLFGIIAGFGLVVGAIFMGGNFADFVNLPGLMIVFGGTGAAILVTFPFEEVVQAVK
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCEEEEECCHHHHHHHHH
GGLQVFGARNVKNRDVVNTMVRVAEISRREGLTALEHIKTENSLLKKACQLIADNADHAL
CCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IRDTVMIEIATMRRRHNVSIAVFNRLGAFAPAFGMIGTLIGLVQMLTRLNDPAAIGPAMA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VAILTTFYGALMANLLFLPIAGKLKARTLQEEVHLFIIFEGAKSILENNNPRLVHEKLSS
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCEEEEEECCHHHHHHCCCCHHHHHHHHH
FLSPQERRSVR
HCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]