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The map label for this gene is ytxE [H]

Identifier: 78356582

GI number: 78356582

Start: 1557963

End: 1558700

Strand: Direct

Name: ytxE [H]

Synonym: Dde_1539

Alternate gene names: 78356582

Gene position: 1557963-1558700 (Clockwise)

Preceding gene: 78356581

Following gene: 78356583

Centisome position: 41.77

GC content: 52.85

Gene sequence:

>738_bases
GTGTCCGATAAGGATCTGCCTTTTTCCCTGATAGAGCAGGAAGAAGAGGACCGCACCGACGAGTGGATTGTCACATTTGC
CGATCTCGCCACGCTGCTGCTTGTTTTTTTCATTCTGCTTTTTTCCATGTCAGTCATCGACGAACAGCGGTTCACCGACT
CGTTCACTTCCGTACGGACGGTTTTCGGCGGCAAGGAAAGCACGCTGTTCACGTCATCTGTGCGTTCGGACGATGCGGCC
CTGCTTGAAAGCGTGCGTTTGCAGAAACAGCTCATCGAGGCTCAGCGGAAGGTGTATTCAGATGTGCGGACCTTTTTGAA
CCGCAAAGGGGTGGAAGGCGTGATCGGGGCGGTTTTTGACGAAGGCGTGATCACCATCAAAGTGCCGGCTGGAGTGCTTT
TTGAAAAGAACTCCGTGGATATTTCCGCAGACGGGCTTTCCATGCTTGAAGGGTTGAATGACTTTTTCCTGAAAAAAAAG
GATCAGTCCATCAATATACGGGGGTATACCGACGACAGTGTGCCGGCTGCCGGCAGCCGCTTCAGGGATAACTGGGAAAT
CTCCGCCCTGCGGGCGGTGAATGTGCTTCGTTTTTTCCTCAAGTCTGGTATAGAGCCCGGACGGCTGACAGCGACCGGAC
TCGGTGATCTTGATCCGCTTTTTCCCAACACCAGCGAAGAAAACCGCGCAAAGAACAGAAGAGTTGAATTTGTTCTGGAG
CGCCGTGTGGGTAAGTAG

Upstream 100 bases:

>100_bases
TTTATCATTTTCGAAGGGGCAAAATCCATACTGGAGAATAACAACCCGCGTCTGGTGCATGAAAAGCTTTCGTCATTCCT
TTCACCTCAGGAGCGCCGGA

Downstream 100 bases:

>100_bases
CTGTCATGAATGAAGAATTTGATATTGTTTTTACCGGGACCGGCGGACAGCGCCGGGCTTTTCGCACGCGTATCAGGGGG
CTTGAAGCCTTTCTTGAAGA

Product: motB protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSDKDLPFSLIEQEEEDRTDEWIVTFADLATLLLVFFILLFSMSVIDEQRFTDSFTSVRTVFGGKESTLFTSSVRSDDAA
LLESVRLQKQLIEAQRKVYSDVRTFLNRKGVEGVIGAVFDEGVITIKVPAGVLFEKNSVDISADGLSMLEGLNDFFLKKK
DQSINIRGYTDDSVPAAGSRFRDNWEISALRAVNVLRFFLKSGIEPGRLTATGLGDLDPLFPNTSEENRAKNRRVEFVLE
RRVGK

Sequences:

>Translated_245_residues
MSDKDLPFSLIEQEEEDRTDEWIVTFADLATLLLVFFILLFSMSVIDEQRFTDSFTSVRTVFGGKESTLFTSSVRSDDAA
LLESVRLQKQLIEAQRKVYSDVRTFLNRKGVEGVIGAVFDEGVITIKVPAGVLFEKNSVDISADGLSMLEGLNDFFLKKK
DQSINIRGYTDDSVPAAGSRFRDNWEISALRAVNVLRFFLKSGIEPGRLTATGLGDLDPLFPNTSEENRAKNRRVEFVLE
RRVGK
>Mature_244_residues
SDKDLPFSLIEQEEEDRTDEWIVTFADLATLLLVFFILLFSMSVIDEQRFTDSFTSVRTVFGGKESTLFTSSVRSDDAAL
LESVRLQKQLIEAQRKVYSDVRTFLNRKGVEGVIGAVFDEGVITIKVPAGVLFEKNSVDISADGLSMLEGLNDFFLKKKD
QSINIRGYTDDSVPAAGSRFRDNWEISALRAVNVLRFFLKSGIEPGRLTATGLGDLDPLFPNTSEENRAKNRRVEFVLER
RVGK

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 27534; Mature: 27402

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKDLPFSLIEQEEEDRTDEWIVTFADLATLLLVFFILLFSMSVIDEQRFTDSFTSVRT
CCCCCCCHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFGGKESTLFTSSVRSDDAALLESVRLQKQLIEAQRKVYSDVRTFLNRKGVEGVIGAVFD
HHCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
EGVITIKVPAGVLFEKNSVDISADGLSMLEGLNDFFLKKKDQSINIRGYTDDSVPAAGSR
CCEEEEEECCCEEEECCCCEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
FRDNWEISALRAVNVLRFFLKSGIEPGRLTATGLGDLDPLFPNTSEENRAKNRRVEFVLE
CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RRVGK
HHCCC
>Mature Secondary Structure 
SDKDLPFSLIEQEEEDRTDEWIVTFADLATLLLVFFILLFSMSVIDEQRFTDSFTSVRT
CCCCCCHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFGGKESTLFTSSVRSDDAALLESVRLQKQLIEAQRKVYSDVRTFLNRKGVEGVIGAVFD
HHCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
EGVITIKVPAGVLFEKNSVDISADGLSMLEGLNDFFLKKKDQSINIRGYTDDSVPAAGSR
CCEEEEEECCCEEEECCCCEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
FRDNWEISALRAVNVLRFFLKSGIEPGRLTATGLGDLDPLFPNTSEENRAKNRRVEFVLE
CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RRVGK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]