| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is glmM
Identifier: 78356562
GI number: 78356562
Start: 1536655
End: 1538007
Strand: Direct
Name: glmM
Synonym: Dde_1517
Alternate gene names: 78356562
Gene position: 1536655-1538007 (Clockwise)
Preceding gene: 78356561
Following gene: 78356563
Centisome position: 41.19
GC content: 57.8
Gene sequence:
>1353_bases ATGACGACACGTCTTTTCGGAACTGACGGCCTGCGCGGGCAGGTAAATATATATCCCATGGTGCCGGACATGGCTCTTCG TCTGGGGCTGGCGGCCGGTACTTTTTTTCGCAACGGCAATAAGCGGCATCGGGTTGTTATCGGCAAAGACACGCGTCTTT CCGGCTATGTATTTGAAATGGCGCTCACATCAGGTCTGTGCGCTGCCGGTATGGACGTTTTTCTGGTGGGCCCCCTGCCT ACGCCCGCCGTGGCGTTTCTTACCCGCAACATGCGGGCTGACCTCGGTGTTGTTATCTCGGCATCGCACAATCCCTTCCA TGACAACGGCATAAAATTTTTTGATAAAGACGGATTCAAGCTGCCGGATTCGCAGGAAGATGCCATAACTGAAATGGTTC TGAACCAGAACCACCGCTGGGACTACCCGGAGCCGGAACGTGTGGGCAGAGCCCATAAGATTCAGGACGCACCCGGCCGG TACATAGTGTACCTGAAGAACAGCTTTCCCAGCACATTGACTCTGGACGGCATGAAGGTGGTGCTTGACTGCGCCAACGG CGCCAACTACCGCGTGGCTCCTCTGGCTCTGGAAGAGCTGGGTGCCGAAGTCATCAGAATAGGCACCAGTCCTGACGGGC TGAACATCAACCACAAATGCGGCTCGCTGTACCCCGAACTTGCCGCGCAGCGCGTGCGTGAAACGGGTGCGGATATCGGC CTTGCCCTTGATGGTGACGCGGACAGGCTGATTGTGGTGGATGAAAAAGGCACCGTGCTGGACGGTGACCAGATTATGGC CATATGTGCCATGGATATGATGGAAAAAGGCCGCCTGCCGGAAAACAGACTGGTGGCCACCGTCATGAGCAATATGGCGC TTGAGGTGTTTATGAAAGAGCGCGGTGGTTCGTTGCTGCGCACTCCCGTGGGCGACCGGCATGTGGTGGAAGCCATGCGC CGGACAGGTGCCGCCATGGGCGGTGAACAGTCCGGACACCTTGTTTTTATGGAATACGGAACCACCGGCGACGGCCTTTT GGCCGCCTTGCAGCTGCTCAGAATCATGCGCGAAAAGAACAGGCCGCTTTCAGAGCTTGCGGGGCTGCTTACACCGTTTC CGCAACAGCTCATCAACGTCCACGTCCAGCGCAAGATTCCCTTTGAACAGTGCCCCGAAATCGGCAGGGCCGTTGAGCAG GCCGAAAAAGAACTTGCCGGCCGCGGCCGGGTGTTGCTGCGCTATTCGGGTACCGAATCTGTGGCGCGGGTGATGGTGGA AGGTGAAGATGATGCTCTGGTGGGCAGACTGGCCGCCGGTCTGGCGGAAACCCTTCAGCAGCATCTGCGCTGA
Upstream 100 bases:
>100_bases TATCAGCATAAGCGGCAGGTAGCGCTCTTCAGCGCGGCTTGTCTGCTTTTTCATGCGTGTCCGCATGTTGCGGAGCACCC ACAATGAGGAGTCGTACAGT
Downstream 100 bases:
>100_bases CCGGTTGAAGGATGCAAGTCTAAGGAGACTGTCATGCTGATACGCAAAGTAGTCATTCCCGTTGCCGGCTGGGGCACGCG TTCGCTGCCTGCCACTAAAA
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MTTRLFGTDGLRGQVNIYPMVPDMALRLGLAAGTFFRNGNKRHRVVIGKDTRLSGYVFEMALTSGLCAAGMDVFLVGPLP TPAVAFLTRNMRADLGVVISASHNPFHDNGIKFFDKDGFKLPDSQEDAITEMVLNQNHRWDYPEPERVGRAHKIQDAPGR YIVYLKNSFPSTLTLDGMKVVLDCANGANYRVAPLALEELGAEVIRIGTSPDGLNINHKCGSLYPELAAQRVRETGADIG LALDGDADRLIVVDEKGTVLDGDQIMAICAMDMMEKGRLPENRLVATVMSNMALEVFMKERGGSLLRTPVGDRHVVEAMR RTGAAMGGEQSGHLVFMEYGTTGDGLLAALQLLRIMREKNRPLSELAGLLTPFPQQLINVHVQRKIPFEQCPEIGRAVEQ AEKELAGRGRVLLRYSGTESVARVMVEGEDDALVGRLAAGLAETLQQHLR
Sequences:
>Translated_450_residues MTTRLFGTDGLRGQVNIYPMVPDMALRLGLAAGTFFRNGNKRHRVVIGKDTRLSGYVFEMALTSGLCAAGMDVFLVGPLP TPAVAFLTRNMRADLGVVISASHNPFHDNGIKFFDKDGFKLPDSQEDAITEMVLNQNHRWDYPEPERVGRAHKIQDAPGR YIVYLKNSFPSTLTLDGMKVVLDCANGANYRVAPLALEELGAEVIRIGTSPDGLNINHKCGSLYPELAAQRVRETGADIG LALDGDADRLIVVDEKGTVLDGDQIMAICAMDMMEKGRLPENRLVATVMSNMALEVFMKERGGSLLRTPVGDRHVVEAMR RTGAAMGGEQSGHLVFMEYGTTGDGLLAALQLLRIMREKNRPLSELAGLLTPFPQQLINVHVQRKIPFEQCPEIGRAVEQ AEKELAGRGRVLLRYSGTESVARVMVEGEDDALVGRLAAGLAETLQQHLR >Mature_449_residues TTRLFGTDGLRGQVNIYPMVPDMALRLGLAAGTFFRNGNKRHRVVIGKDTRLSGYVFEMALTSGLCAAGMDVFLVGPLPT PAVAFLTRNMRADLGVVISASHNPFHDNGIKFFDKDGFKLPDSQEDAITEMVLNQNHRWDYPEPERVGRAHKIQDAPGRY IVYLKNSFPSTLTLDGMKVVLDCANGANYRVAPLALEELGAEVIRIGTSPDGLNINHKCGSLYPELAAQRVRETGADIGL ALDGDADRLIVVDEKGTVLDGDQIMAICAMDMMEKGRLPENRLVATVMSNMALEVFMKERGGSLLRTPVGDRHVVEAMRR TGAAMGGEQSGHLVFMEYGTTGDGLLAALQLLRIMREKNRPLSELAGLLTPFPQQLINVHVQRKIPFEQCPEIGRAVEQA EKELAGRGRVLLRYSGTESVARVMVEGEDDALVGRLAAGLAETLQQHLR
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=446, Percent_Identity=47.3094170403587, Blast_Score=374, Evalue=1e-104, Organism=Escherichia coli, GI1788361, Length=435, Percent_Identity=29.1954022988506, Blast_Score=126, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17535441, Length=375, Percent_Identity=25.3333333333333, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_DESDG (Q311T0)
Other databases:
- EMBL: CP000112 - RefSeq: YP_388011.1 - ProteinModelPortal: Q311T0 - SMR: Q311T0 - STRING: Q311T0 - GeneID: 3756033 - GenomeReviews: CP000112_GR - KEGG: dde:Dde_1517 - NMPDR: fig|207559.3.peg.724 - eggNOG: COG1109 - HOGENOM: HBG644964 - OMA: VHDRYIE - ProtClustDB: PRK14314 - BioCyc: DDES207559:DDE_1517-MONOMER - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 49250; Mature: 49118
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 102-102
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRLFGTDGLRGQVNIYPMVPDMALRLGLAAGTFFRNGNKRHRVVIGKDTRLSGYVFEM CCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHH ALTSGLCAAGMDVFLVGPLPTPAVAFLTRNMRADLGVVISASHNPFHDNGIKFFDKDGFK HHHCCHHHCCCCEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCCC LPDSQEDAITEMVLNQNHRWDYPEPERVGRAHKIQDAPGRYIVYLKNSFPSTLTLDGMKV CCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCEEEECCEEE VLDCANGANYRVAPLALEELGAEVIRIGTSPDGLNINHKCGSLYPELAAQRVRETGADIG EEECCCCCCEEEHHHHHHHCCCEEEEECCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCEE LALDGDADRLIVVDEKGTVLDGDQIMAICAMDMMEKGRLPENRLVATVMSNMALEVFMKE EEECCCCCEEEEECCCCCEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RGGSLLRTPVGDRHVVEAMRRTGAAMGGEQSGHLVFMEYGTTGDGLLAALQLLRIMREKN CCCCEEECCCCCHHHHHHHHHHCHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCC RPLSELAGLLTPFPQQLINVHVQRKIPFEQCPEIGRAVEQAEKELAGRGRVLLRYSGTES CCHHHHHHHHCCCHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHH VARVMVEGEDDALVGRLAAGLAETLQQHLR HEEEEEECCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTRLFGTDGLRGQVNIYPMVPDMALRLGLAAGTFFRNGNKRHRVVIGKDTRLSGYVFEM CEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHH ALTSGLCAAGMDVFLVGPLPTPAVAFLTRNMRADLGVVISASHNPFHDNGIKFFDKDGFK HHHCCHHHCCCCEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCCC LPDSQEDAITEMVLNQNHRWDYPEPERVGRAHKIQDAPGRYIVYLKNSFPSTLTLDGMKV CCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCEEEECCEEE VLDCANGANYRVAPLALEELGAEVIRIGTSPDGLNINHKCGSLYPELAAQRVRETGADIG EEECCCCCCEEEHHHHHHHCCCEEEEECCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCEE LALDGDADRLIVVDEKGTVLDGDQIMAICAMDMMEKGRLPENRLVATVMSNMALEVFMKE EEECCCCCEEEEECCCCCEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RGGSLLRTPVGDRHVVEAMRRTGAAMGGEQSGHLVFMEYGTTGDGLLAALQLLRIMREKN CCCCEEECCCCCHHHHHHHHHHCHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCC RPLSELAGLLTPFPQQLINVHVQRKIPFEQCPEIGRAVEQAEKELAGRGRVLLRYSGTES CCHHHHHHHHCCCHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHH VARVMVEGEDDALVGRLAAGLAETLQQHLR HEEEEEECCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA