| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is gtaB [H]
Identifier: 78356563
GI number: 78356563
Start: 1538041
End: 1538913
Strand: Direct
Name: gtaB [H]
Synonym: Dde_1518
Alternate gene names: 78356563
Gene position: 1538041-1538913 (Clockwise)
Preceding gene: 78356562
Following gene: 78356564
Centisome position: 41.23
GC content: 56.36
Gene sequence:
>873_bases ATGCTGATACGCAAAGTAGTCATTCCCGTTGCCGGCTGGGGCACGCGTTCGCTGCCTGCCACTAAAAACATTCCCAAGGA AATGCTGCCCGTCTATAACAAGCCTGTGGTGCAGTATGTGGTGGAAGAGGCCATGCGCTCCGGCCTGACAGATGTTGTTT TTGTGACCAACCGTGACAAAACCATCATCGAAGATCACTTTGACTATAACCTGCAGCTTGAAAGTGTGCTGGAGCGCGCC GGCAAGACGGAAATGCTGCGGCAGGTGCGTGAAGTTGCCGAAATGGTGAACATCCATTCCGTGCGTCAGAAGCGCCAGCT CGGGCTGGGGCATGCGGTGCTGTGCGCCCGCGAAGTGGTGCATAACGAGCCTTTTGCCGTGATGGTGGGAGACGACCTGC AGTTCGGCATGGAGCCGGGAATCCAGCAGCTTATCAATGTGGCGGTGGCCGAAAGGCTGCCCGTGGTGGGGGTTATGGAA GTTCCGGCTGACAAAGTGAGCCGGTACGGCATTATTTCCGGCGAGGAAATCTCCCCCGGTATTTTCAGAGTGCACGATCT TGTGGAAAAGCCCGCCGTCAGCGAAGCTCCGTCGCGTCTTGCCATTGTGGGACGTTACATTCTGACTCCTGATATTTTCA AGGTGCTGGAGAATCTGTCTCCGGGGCATGGCGGCGAGATACAGCTCACCGACGGGCTTAAGGTGCTGGCACAGGGGCGC GGTCTGCTGGCTGTTAAACTGCGCGGTATGCGGTTTGACGCAGGCGACTGGGCTGAATATCTGACTGCCAACATATATTT TGCGTTGCAGGAGGAAGACCTGCGCGATGAACTGGTGGAGCGGCTGCGTCCTTTGCTTCCCTTCAAATGTTGA
Upstream 100 bases:
>100_bases AGATGATGCTCTGGTGGGCAGACTGGCCGCCGGTCTGGCGGAAACCCTTCAGCAGCATCTGCGCTGACCGGTTGAAGGAT GCAAGTCTAAGGAGACTGTC
Downstream 100 bases:
>100_bases CGCAGGGGCGGCTTTTTTATGATTCTGTGCGGGCGGCGGTGTCGCCCGCTTTTTTTCGTCACTTCCGGCAACCGGCAACT CGTTATGAATGAAAATCTGC
Product: UDP-glucose pyrophosphorylase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; General stress protein 33; GSP33; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MLIRKVVIPVAGWGTRSLPATKNIPKEMLPVYNKPVVQYVVEEAMRSGLTDVVFVTNRDKTIIEDHFDYNLQLESVLERA GKTEMLRQVREVAEMVNIHSVRQKRQLGLGHAVLCAREVVHNEPFAVMVGDDLQFGMEPGIQQLINVAVAERLPVVGVME VPADKVSRYGIISGEEISPGIFRVHDLVEKPAVSEAPSRLAIVGRYILTPDIFKVLENLSPGHGGEIQLTDGLKVLAQGR GLLAVKLRGMRFDAGDWAEYLTANIYFALQEEDLRDELVERLRPLLPFKC
Sequences:
>Translated_290_residues MLIRKVVIPVAGWGTRSLPATKNIPKEMLPVYNKPVVQYVVEEAMRSGLTDVVFVTNRDKTIIEDHFDYNLQLESVLERA GKTEMLRQVREVAEMVNIHSVRQKRQLGLGHAVLCAREVVHNEPFAVMVGDDLQFGMEPGIQQLINVAVAERLPVVGVME VPADKVSRYGIISGEEISPGIFRVHDLVEKPAVSEAPSRLAIVGRYILTPDIFKVLENLSPGHGGEIQLTDGLKVLAQGR GLLAVKLRGMRFDAGDWAEYLTANIYFALQEEDLRDELVERLRPLLPFKC >Mature_290_residues MLIRKVVIPVAGWGTRSLPATKNIPKEMLPVYNKPVVQYVVEEAMRSGLTDVVFVTNRDKTIIEDHFDYNLQLESVLERA GKTEMLRQVREVAEMVNIHSVRQKRQLGLGHAVLCAREVVHNEPFAVMVGDDLQFGMEPGIQQLINVAVAERLPVVGVME VPADKVSRYGIISGEEISPGIFRVHDLVEKPAVSEAPSRLAIVGRYILTPDIFKVLENLSPGHGGEIQLTDGLKVLAQGR GLLAVKLRGMRFDAGDWAEYLTANIYFALQEEDLRDELVERLRPLLPFKC
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used as a membr
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=283, Percent_Identity=41.3427561837456, Blast_Score=202, Evalue=2e-53, Organism=Escherichia coli, GI1788355, Length=280, Percent_Identity=35.7142857142857, Blast_Score=169, Evalue=2e-43, Organism=Escherichia coli, GI1788351, Length=279, Percent_Identity=25.8064516129032, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1790224, Length=255, Percent_Identity=23.921568627451, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 32414; Mature: 32414
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIRKVVIPVAGWGTRSLPATKNIPKEMLPVYNKPVVQYVVEEAMRSGLTDVVFVTNRDK CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCC TIIEDHFDYNLQLESVLERAGKTEMLRQVREVAEMVNIHSVRQKRQLGLGHAVLCAREVV EEECCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH HNEPFAVMVGDDLQFGMEPGIQQLINVAVAERLPVVGVMEVPADKVSRYGIISGEEISPG CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCCCCH IFRVHDLVEKPAVSEAPSRLAIVGRYILTPDIFKVLENLSPGHGGEIQLTDGLKVLAQGR HHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCHHHHHCCC GLLAVKLRGMRFDAGDWAEYLTANIYFALQEEDLRDELVERLRPLLPFKC CEEEEEEECEECCCCHHHHHHHHHEEEEECCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLIRKVVIPVAGWGTRSLPATKNIPKEMLPVYNKPVVQYVVEEAMRSGLTDVVFVTNRDK CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCC TIIEDHFDYNLQLESVLERAGKTEMLRQVREVAEMVNIHSVRQKRQLGLGHAVLCAREVV EEECCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH HNEPFAVMVGDDLQFGMEPGIQQLINVAVAERLPVVGVMEVPADKVSRYGIISGEEISPG CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCCCCH IFRVHDLVEKPAVSEAPSRLAIVGRYILTPDIFKVLENLSPGHGGEIQLTDGLKVLAQGR HHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCHHHHHCCC GLLAVKLRGMRFDAGDWAEYLTANIYFALQEEDLRDELVERLRPLLPFKC CEEEEEEECEECCCCHHHHHHHHHEEEEECCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8320212; 8126437; 9384377; 9298659 [H]