Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is gtaB [H]

Identifier: 78356563

GI number: 78356563

Start: 1538041

End: 1538913

Strand: Direct

Name: gtaB [H]

Synonym: Dde_1518

Alternate gene names: 78356563

Gene position: 1538041-1538913 (Clockwise)

Preceding gene: 78356562

Following gene: 78356564

Centisome position: 41.23

GC content: 56.36

Gene sequence:

>873_bases
ATGCTGATACGCAAAGTAGTCATTCCCGTTGCCGGCTGGGGCACGCGTTCGCTGCCTGCCACTAAAAACATTCCCAAGGA
AATGCTGCCCGTCTATAACAAGCCTGTGGTGCAGTATGTGGTGGAAGAGGCCATGCGCTCCGGCCTGACAGATGTTGTTT
TTGTGACCAACCGTGACAAAACCATCATCGAAGATCACTTTGACTATAACCTGCAGCTTGAAAGTGTGCTGGAGCGCGCC
GGCAAGACGGAAATGCTGCGGCAGGTGCGTGAAGTTGCCGAAATGGTGAACATCCATTCCGTGCGTCAGAAGCGCCAGCT
CGGGCTGGGGCATGCGGTGCTGTGCGCCCGCGAAGTGGTGCATAACGAGCCTTTTGCCGTGATGGTGGGAGACGACCTGC
AGTTCGGCATGGAGCCGGGAATCCAGCAGCTTATCAATGTGGCGGTGGCCGAAAGGCTGCCCGTGGTGGGGGTTATGGAA
GTTCCGGCTGACAAAGTGAGCCGGTACGGCATTATTTCCGGCGAGGAAATCTCCCCCGGTATTTTCAGAGTGCACGATCT
TGTGGAAAAGCCCGCCGTCAGCGAAGCTCCGTCGCGTCTTGCCATTGTGGGACGTTACATTCTGACTCCTGATATTTTCA
AGGTGCTGGAGAATCTGTCTCCGGGGCATGGCGGCGAGATACAGCTCACCGACGGGCTTAAGGTGCTGGCACAGGGGCGC
GGTCTGCTGGCTGTTAAACTGCGCGGTATGCGGTTTGACGCAGGCGACTGGGCTGAATATCTGACTGCCAACATATATTT
TGCGTTGCAGGAGGAAGACCTGCGCGATGAACTGGTGGAGCGGCTGCGTCCTTTGCTTCCCTTCAAATGTTGA

Upstream 100 bases:

>100_bases
AGATGATGCTCTGGTGGGCAGACTGGCCGCCGGTCTGGCGGAAACCCTTCAGCAGCATCTGCGCTGACCGGTTGAAGGAT
GCAAGTCTAAGGAGACTGTC

Downstream 100 bases:

>100_bases
CGCAGGGGCGGCTTTTTTATGATTCTGTGCGGGCGGCGGTGTCGCCCGCTTTTTTTCGTCACTTCCGGCAACCGGCAACT
CGTTATGAATGAAAATCTGC

Product: UDP-glucose pyrophosphorylase

Products: NA

Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; General stress protein 33; GSP33; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MLIRKVVIPVAGWGTRSLPATKNIPKEMLPVYNKPVVQYVVEEAMRSGLTDVVFVTNRDKTIIEDHFDYNLQLESVLERA
GKTEMLRQVREVAEMVNIHSVRQKRQLGLGHAVLCAREVVHNEPFAVMVGDDLQFGMEPGIQQLINVAVAERLPVVGVME
VPADKVSRYGIISGEEISPGIFRVHDLVEKPAVSEAPSRLAIVGRYILTPDIFKVLENLSPGHGGEIQLTDGLKVLAQGR
GLLAVKLRGMRFDAGDWAEYLTANIYFALQEEDLRDELVERLRPLLPFKC

Sequences:

>Translated_290_residues
MLIRKVVIPVAGWGTRSLPATKNIPKEMLPVYNKPVVQYVVEEAMRSGLTDVVFVTNRDKTIIEDHFDYNLQLESVLERA
GKTEMLRQVREVAEMVNIHSVRQKRQLGLGHAVLCAREVVHNEPFAVMVGDDLQFGMEPGIQQLINVAVAERLPVVGVME
VPADKVSRYGIISGEEISPGIFRVHDLVEKPAVSEAPSRLAIVGRYILTPDIFKVLENLSPGHGGEIQLTDGLKVLAQGR
GLLAVKLRGMRFDAGDWAEYLTANIYFALQEEDLRDELVERLRPLLPFKC
>Mature_290_residues
MLIRKVVIPVAGWGTRSLPATKNIPKEMLPVYNKPVVQYVVEEAMRSGLTDVVFVTNRDKTIIEDHFDYNLQLESVLERA
GKTEMLRQVREVAEMVNIHSVRQKRQLGLGHAVLCAREVVHNEPFAVMVGDDLQFGMEPGIQQLINVAVAERLPVVGVME
VPADKVSRYGIISGEEISPGIFRVHDLVEKPAVSEAPSRLAIVGRYILTPDIFKVLENLSPGHGGEIQLTDGLKVLAQGR
GLLAVKLRGMRFDAGDWAEYLTANIYFALQEEDLRDELVERLRPLLPFKC

Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used as a membr

COG id: COG1210

COG function: function code M; UDP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDPGP type 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787488, Length=283, Percent_Identity=41.3427561837456, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1788355, Length=280, Percent_Identity=35.7142857142857, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1788351, Length=279, Percent_Identity=25.8064516129032, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1790224, Length=255, Percent_Identity=23.921568627451, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005771
- InterPro:   IPR005835 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.9 [H]

Molecular weight: Translated: 32414; Mature: 32414

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIRKVVIPVAGWGTRSLPATKNIPKEMLPVYNKPVVQYVVEEAMRSGLTDVVFVTNRDK
CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCC
TIIEDHFDYNLQLESVLERAGKTEMLRQVREVAEMVNIHSVRQKRQLGLGHAVLCAREVV
EEECCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HNEPFAVMVGDDLQFGMEPGIQQLINVAVAERLPVVGVMEVPADKVSRYGIISGEEISPG
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCCCCH
IFRVHDLVEKPAVSEAPSRLAIVGRYILTPDIFKVLENLSPGHGGEIQLTDGLKVLAQGR
HHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCHHHHHCCC
GLLAVKLRGMRFDAGDWAEYLTANIYFALQEEDLRDELVERLRPLLPFKC
CEEEEEEECEECCCCHHHHHHHHHEEEEECCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLIRKVVIPVAGWGTRSLPATKNIPKEMLPVYNKPVVQYVVEEAMRSGLTDVVFVTNRDK
CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCC
TIIEDHFDYNLQLESVLERAGKTEMLRQVREVAEMVNIHSVRQKRQLGLGHAVLCAREVV
EEECCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HNEPFAVMVGDDLQFGMEPGIQQLINVAVAERLPVVGVMEVPADKVSRYGIISGEEISPG
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCCCCH
IFRVHDLVEKPAVSEAPSRLAIVGRYILTPDIFKVLENLSPGHGGEIQLTDGLKVLAQGR
HHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCHHHHHCCC
GLLAVKLRGMRFDAGDWAEYLTANIYFALQEEDLRDELVERLRPLLPFKC
CEEEEEEECEECCCCHHHHHHHHHEEEEECCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320212; 8126437; 9384377; 9298659 [H]