| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78356542
Identifier: 78356542
GI number: 78356542
Start: 1517482
End: 1518198
Strand: Reverse
Name: 78356542
Synonym: Dde_1497
Alternate gene names: NA
Gene position: 1518198-1517482 (Counterclockwise)
Preceding gene: 78356543
Following gene: 78356541
Centisome position: 40.7
GC content: 54.67
Gene sequence:
>717_bases ATGACCGCTCAGGATTCTTCAGGCGGCTTTATGGCGTTGCTGCGCCGGTTCATCAAGGCAAACCTGTTTGCCGGCATACT GGTGCTTACCCCGCTGGTGGCGACTTTTCTCACACTGCGGGTGGCAGTGCGCTGGGTGGACAAACTGCTGCTGCTCCTGC CGCCGCAGTACCGTCCGGAGGCTTTTCTGCCTTTTGCCGTGCCGGGGCTGGGGTTTCTGCTGCTGATCGTGGTGCTGCTG GTCACAGGGCTGCTTGTGCGCAATTTTCTGGGGCGCCGCCTTGTAGATCTGGGCGACGCCATTCTGGCACGCATACCGCT GGTCAGTTCGCTGTACTCCGGTATCAAGCAGCTGGTGGAAACCATATTCACCTCTTCGCGCGATTTTCAGCGGGTGGTGC TGATAGAATATCCACGCAAGGGGCTGTATACCATGGCATTTGTCACAGGCGTTGCCGTGGGTGAAATTCAAAGCAAAACA GCCAGCAAAGTGCTGAACGTGTTTGTGCCCACCACCCCGAACCCCACTTCGGGCTTTTACCTCATGGTGCCCGAAGCGGA TGTCATTCCGTTGGAAATGAATGTGGAAGATGCATTCAAACTGCTTATTTCCGGCGGAATTCTGAGTGCAGAGCACGAAA AGTCGAAAAACAGAAAAAAGAAAACAGCCATCAAGGCGAAGAACACATCCCAGGAGGAAACGCATGATCCCTTATAA
Upstream 100 bases:
>100_bases GAACGTGTGGGGGGCATGGCCACATGCGCAGCCGCCGTACGTCTGGGCAGAGCACGCCTGATTGACAATCTGGCTCTGAT ATGAACGGCAGGCACGGATA
Downstream 100 bases:
>100_bases GGGTAAATACCACTTCACTTCCGAATCGGTTACCGAAGGCCATCCCGACAAAGTCGCTGACCAGATTTCCGACGCCGTGC TTGATGTGCTGCTCGAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTAQDSSGGFMALLRRFIKANLFAGILVLTPLVATFLTLRVAVRWVDKLLLLLPPQYRPEAFLPFAVPGLGFLLLIVVLL VTGLLVRNFLGRRLVDLGDAILARIPLVSSLYSGIKQLVETIFTSSRDFQRVVLIEYPRKGLYTMAFVTGVAVGEIQSKT ASKVLNVFVPTTPNPTSGFYLMVPEADVIPLEMNVEDAFKLLISGGILSAEHEKSKNRKKKTAIKAKNTSQEETHDPL
Sequences:
>Translated_238_residues MTAQDSSGGFMALLRRFIKANLFAGILVLTPLVATFLTLRVAVRWVDKLLLLLPPQYRPEAFLPFAVPGLGFLLLIVVLL VTGLLVRNFLGRRLVDLGDAILARIPLVSSLYSGIKQLVETIFTSSRDFQRVVLIEYPRKGLYTMAFVTGVAVGEIQSKT ASKVLNVFVPTTPNPTSGFYLMVPEADVIPLEMNVEDAFKLLISGGILSAEHEKSKNRKKKTAIKAKNTSQEETHDPL >Mature_237_residues TAQDSSGGFMALLRRFIKANLFAGILVLTPLVATFLTLRVAVRWVDKLLLLLPPQYRPEAFLPFAVPGLGFLLLIVVLLV TGLLVRNFLGRRLVDLGDAILARIPLVSSLYSGIKQLVETIFTSSRDFQRVVLIEYPRKGLYTMAFVTGVAVGEIQSKTA SKVLNVFVPTTPNPTSGFYLMVPEADVIPLEMNVEDAFKLLISGGILSAEHEKSKNRKKKTAIKAKNTSQEETHDPL
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26227; Mature: 26095
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQDSSGGFMALLRRFIKANLFAGILVLTPLVATFLTLRVAVRWVDKLLLLLPPQYRPE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AFLPFAVPGLGFLLLIVVLLVTGLLVRNFLGRRLVDLGDAILARIPLVSSLYSGIKQLVE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIFTSSRDFQRVVLIEYPRKGLYTMAFVTGVAVGEIQSKTASKVLNVFVPTTPNPTSGFY HHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEE LMVPEADVIPLEMNVEDAFKLLISGGILSAEHEKSKNRKKKTAIKAKNTSQEETHDPL EECCCCCEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TAQDSSGGFMALLRRFIKANLFAGILVLTPLVATFLTLRVAVRWVDKLLLLLPPQYRPE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AFLPFAVPGLGFLLLIVVLLVTGLLVRNFLGRRLVDLGDAILARIPLVSSLYSGIKQLVE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIFTSSRDFQRVVLIEYPRKGLYTMAFVTGVAVGEIQSKTASKVLNVFVPTTPNPTSGFY HHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEE LMVPEADVIPLEMNVEDAFKLLISGGILSAEHEKSKNRKKKTAIKAKNTSQEETHDPL EECCCCCEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA