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The map label for this gene is 78356523

Identifier: 78356523

GI number: 78356523

Start: 1498280

End: 1498693

Strand: Reverse

Name: 78356523

Synonym: Dde_1478

Alternate gene names: NA

Gene position: 1498693-1498280 (Counterclockwise)

Preceding gene: 78356524

Following gene: 78356522

Centisome position: 40.18

GC content: 53.86

Gene sequence:

>414_bases
ATGCCGAAAAAAAACAGCAAGACCATCTACATAGCCGCCCTGCTTCTTTTTGTGGGCGGGGTGGGATATCTGCTCTTTTC
CGGCTTGTCCCAGAACAGCGTTTATTTTCTGAATGTATCAGAAGCGCTGGCCATGCCGTCCGGCGACCTGAAATCGGCGC
GGCTGTTCGGCACGGTCAAGGCCGAAGGCCTGCAGCGCATAGACGAGGGACTGGGCGTCCGGTTCCAGATTGAAGACAAA
GACAACAAAACGCGTACCATGTGGGTTGAGTATAAAGGCGCTGTGCCTGACACATTCAAACCCGGTGCGGAAGTAATCAT
AGAAGGCGGCGTTGCCCCCCAGACACAAATGTTTGCAGCACGCACGCTCATGACCAAGTGTCCCTCGAAATACCAGAAGG
AAAACCGGGAATAG

Upstream 100 bases:

>100_bases
TTCGTAAAAACAACAATTCATCATTATTCGCGAGCAACGAGCCACACGTGCCCGCGGTGACCATACATACCGTTCGGAAA
CCGTAACACATGGAGCATCC

Downstream 100 bases:

>100_bases
ACACAGGGCTGAAACAAGGCCGGCAGCCAGCTGGCCTTTTTTACAGGCAGGTTCTTCCCGCGGGCCTTCTTTTTTTACGC
TCACTCACGGCTGACGCCGT

Product: cytochrome c-type biogenesis protein CcmE

Products: NA

Alternate protein names: CcmE/CycJ Protein

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MPKKNSKTIYIAALLLFVGGVGYLLFSGLSQNSVYFLNVSEALAMPSGDLKSARLFGTVKAEGLQRIDEGLGVRFQIEDK
DNKTRTMWVEYKGAVPDTFKPGAEVIIEGGVAPQTQMFAARTLMTKCPSKYQKENRE

Sequences:

>Translated_137_residues
MPKKNSKTIYIAALLLFVGGVGYLLFSGLSQNSVYFLNVSEALAMPSGDLKSARLFGTVKAEGLQRIDEGLGVRFQIEDK
DNKTRTMWVEYKGAVPDTFKPGAEVIIEGGVAPQTQMFAARTLMTKCPSKYQKENRE
>Mature_136_residues
PKKNSKTIYIAALLLFVGGVGYLLFSGLSQNSVYFLNVSEALAMPSGDLKSARLFGTVKAEGLQRIDEGLGVRFQIEDKD
NKTRTMWVEYKGAVPDTFKPGAEVIIEGGVAPQTQMFAARTLMTKCPSKYQKENRE

Specific function: Unknown

COG id: COG2332

COG function: function code O; Cytochrome c-type biogenesis protein CcmE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15115; Mature: 14983

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKKNSKTIYIAALLLFVGGVGYLLFSGLSQNSVYFLNVSEALAMPSGDLKSARLFGTVK
CCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCCCCCCCEEEEEEHH
AEGLQRIDEGLGVRFQIEDKDNKTRTMWVEYKGAVPDTFKPGAEVIIEGGVAPQTQMFAA
HHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHH
RTLMTKCPSKYQKENRE
HHHHHHCCHHHHHCCCC
>Mature Secondary Structure 
PKKNSKTIYIAALLLFVGGVGYLLFSGLSQNSVYFLNVSEALAMPSGDLKSARLFGTVK
CCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCCCCCCCEEEEEEHH
AEGLQRIDEGLGVRFQIEDKDNKTRTMWVEYKGAVPDTFKPGAEVIIEGGVAPQTQMFAA
HHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHH
RTLMTKCPSKYQKENRE
HHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA