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The map label for this gene is yfjD [C]

Identifier: 78356524

GI number: 78356524

Start: 1498823

End: 1499860

Strand: Reverse

Name: yfjD [C]

Synonym: Dde_1479

Alternate gene names: 78356524

Gene position: 1499860-1498823 (Counterclockwise)

Preceding gene: 78356525

Following gene: 78356523

Centisome position: 40.21

GC content: 55.88

Gene sequence:

>1038_bases
ATGATTGAATTTATTCTGGCGGTTTCCTTTGCCGTCATCATATCGGCTTCTTGTTCCGTGGCAGAAGCAGTGCTGTATTC
CGTTCCATGGAGCCATATCGAGCAACTGCGCAAAAAGGGTCGCCGTTCGGGCGAACTGATGTTCACCCTGCGTTCCAACA
TCGATAAACCCATTACAGCGGTGCTCACCCTGAACACCGTGGCCAACACCGCCGGCGCATCCATTGCCGGTGCAGCCGCG
GCCAATGTGTTCGGCGCAGAACATATGGCCACCTTTGCGGCATGCTTCACGGTCATCATTCTCATCTGTTCGGAAATCAT
ACCAAAAACGCTGGGCGTCACGTACGCACGCCCGCTGACTTCAGTGGTGGCCGCTCCGCTCAACATGCTTGTGTGGCTGC
TTTCGCCTGTTATCATCATCGGCGGCTGGATAACCAAACTGATGACTCCGGCAAAAACGCGCCCCGAAGCCTCGGAAGAA
GATATCAGAGCGCTGGTCAGCCTGTCGCGCAAGTCCGGCATCCTAAAACCGTATGAAGAAATTTCTATCCAGAATATCCT
GTCACTGGATAAAAAGCGGGTCGAAGACATAATGACCCCGCGCACTGTGGTTTTTTCGCTTCAGGCGGACATGACCGTGG
AAGAGGCCCACGAGCGCCCCGGATTCTGGAACTACAGCCGTATCCCCTTGTGGCAGGACAACAACGAGGACATGGTGGGC
ATAGTCATGCGCCGCCACGTTCTGCAGGAAGTCGCTGCGGACAGGCATCTGACGCGCCTTTCCGAAATAATGACTCCGGT
GACTTTTGTGCTTGAATCGCTGACTCTTGACAGGCTGCTCACTCAAATGCTGGAAAGACGGGTGCATCTGGCCGTGGTGC
TGGACGAATACGGCGGCGTTGCCGGCGTGGTCGCACTGGAAGACGTGCTGGAAGAAATTCTGGGCAAAGAAATCGTGGAC
GAATCGGACCAGTTTGCCGACCTGCAGCAACTGGCCCGCTCGCGCAGGGCCAGACTTACGGGCGGCAAAAGCGTGTGA

Upstream 100 bases:

>100_bases
TTGCTATACTTGCGGCATATGTCATACGCTTATCCGGTCTTTCCGGCCGTCCGTGGGTGCAACGTCCCCTCCTTTTTCAT
AACAGGATCATTCATCCGTC

Downstream 100 bases:

>100_bases
AGCCTTGATTCCCGACCGGAAAGTCCGTATTCGTAAAAACAACAATTCATCATTATTCGCGAGCAACGAGCCACACGTGC
CCGCGGTGACCATACATACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MIEFILAVSFAVIISASCSVAEAVLYSVPWSHIEQLRKKGRRSGELMFTLRSNIDKPITAVLTLNTVANTAGASIAGAAA
ANVFGAEHMATFAACFTVIILICSEIIPKTLGVTYARPLTSVVAAPLNMLVWLLSPVIIIGGWITKLMTPAKTRPEASEE
DIRALVSLSRKSGILKPYEEISIQNILSLDKKRVEDIMTPRTVVFSLQADMTVEEAHERPGFWNYSRIPLWQDNNEDMVG
IVMRRHVLQEVAADRHLTRLSEIMTPVTFVLESLTLDRLLTQMLERRVHLAVVLDEYGGVAGVVALEDVLEEILGKEIVD
ESDQFADLQQLARSRRARLTGGKSV

Sequences:

>Translated_345_residues
MIEFILAVSFAVIISASCSVAEAVLYSVPWSHIEQLRKKGRRSGELMFTLRSNIDKPITAVLTLNTVANTAGASIAGAAA
ANVFGAEHMATFAACFTVIILICSEIIPKTLGVTYARPLTSVVAAPLNMLVWLLSPVIIIGGWITKLMTPAKTRPEASEE
DIRALVSLSRKSGILKPYEEISIQNILSLDKKRVEDIMTPRTVVFSLQADMTVEEAHERPGFWNYSRIPLWQDNNEDMVG
IVMRRHVLQEVAADRHLTRLSEIMTPVTFVLESLTLDRLLTQMLERRVHLAVVLDEYGGVAGVVALEDVLEEILGKEIVD
ESDQFADLQQLARSRRARLTGGKSV
>Mature_345_residues
MIEFILAVSFAVIISASCSVAEAVLYSVPWSHIEQLRKKGRRSGELMFTLRSNIDKPITAVLTLNTVANTAGASIAGAAA
ANVFGAEHMATFAACFTVIILICSEIIPKTLGVTYARPLTSVVAAPLNMLVWLLSPVIIIGGWITKLMTPAKTRPEASEE
DIRALVSLSRKSGILKPYEEISIQNILSLDKKRVEDIMTPRTVVFSLQADMTVEEAHERPGFWNYSRIPLWQDNNEDMVG
IVMRRHVLQEVAADRHLTRLSEIMTPVTFVLESLTLDRLLTQMLERRVHLAVVLDEYGGVAGVVALEDVLEEILGKEIVD
ESDQFADLQQLARSRRARLTGGKSV

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=351, Percent_Identity=25.6410256410256, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI94681046, Length=316, Percent_Identity=26.2658227848101, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI40068053, Length=177, Percent_Identity=32.2033898305085, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI40068055, Length=177, Percent_Identity=32.2033898305085, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI145693175, Length=309, Percent_Identity=24.2718446601942, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1786879, Length=174, Percent_Identity=26.4367816091954, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1790664, Length=367, Percent_Identity=21.7983651226158, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87082033, Length=192, Percent_Identity=30.2083333333333, Blast_Score=65, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6324512, Length=247, Percent_Identity=31.9838056680162, Blast_Score=95, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR002550 [H]

Pfam domain/function: PF00571 CBS; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 38094; Mature: 38094

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFILAVSFAVIISASCSVAEAVLYSVPWSHIEQLRKKGRRSGELMFTLRSNIDKPITA
CHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEHHCCCCCHHH
VLTLNTVANTAGASIAGAAAANVFGAEHMATFAACFTVIILICSEIIPKTLGVTYARPLT
HEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SVVAAPLNMLVWLLSPVIIIGGWITKLMTPAKTRPEASEEDIRALVSLSRKSGILKPYEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHH
ISIQNILSLDKKRVEDIMTPRTVVFSLQADMTVEEAHERPGFWNYSRIPLWQDNNEDMVG
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCEECCCCCHHH
IVMRRHVLQEVAADRHLTRLSEIMTPVTFVLESLTLDRLLTQMLERRVHLAVVLDEYGGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCH
AGVVALEDVLEEILGKEIVDESDQFADLQQLARSRRARLTGGKSV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIEFILAVSFAVIISASCSVAEAVLYSVPWSHIEQLRKKGRRSGELMFTLRSNIDKPITA
CHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEHHCCCCCHHH
VLTLNTVANTAGASIAGAAAANVFGAEHMATFAACFTVIILICSEIIPKTLGVTYARPLT
HEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SVVAAPLNMLVWLLSPVIIIGGWITKLMTPAKTRPEASEEDIRALVSLSRKSGILKPYEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHH
ISIQNILSLDKKRVEDIMTPRTVVFSLQADMTVEEAHERPGFWNYSRIPLWQDNNEDMVG
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCEECCCCCHHH
IVMRRHVLQEVAADRHLTRLSEIMTPVTFVLESLTLDRLLTQMLERRVHLAVVLDEYGGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCH
AGVVALEDVLEEILGKEIVDESDQFADLQQLARSRRARLTGGKSV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]