| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is hisC
Identifier: 78356498
GI number: 78356498
Start: 1476595
End: 1477746
Strand: Reverse
Name: hisC
Synonym: Dde_1453
Alternate gene names: 78356498
Gene position: 1477746-1476595 (Counterclockwise)
Preceding gene: 78356499
Following gene: 78356497
Centisome position: 39.62
GC content: 58.85
Gene sequence:
>1152_bases ATGACTGAACCCGCAAAGCGGGAAGATTCCGGGCTGCCTGAGGCCGTTACTGCCATACGGCCAGAGGTGGCGGCATTCAA ACCATACGCGCCCGGCCTTTCCATTGATGAAATCAAGGAACGCTACGGACTTTCCCAGGTCGTGAAAATGGCCAGCAACG AAAATCCGCTGGGCACCTCGCCGCTGGTTCAGCAGACACTGCGTACCCATGCAGACCTTGCCTTCCGGTATGTCCAGTCC GGCAATCCCCGGCTGGTCAGCGCCATTGCCCGGTCTTTCGGCGTTGCTGCCGAAAGCGTGGTCACCGGCAACGGCTCTGA CGAGGTGATAGACCTTATCATACGGGTCAAGGCCCGCCCCGGAAAGCACAACATTGTCGCATTCAATCCCTGCTTCAGCA TGTACGAGCTGCAGACGCGCTTCTGCGGTGTAGAGTTCCGGCAGGTACCGCTGCGTGCCGACTTCAGTTTCGACTACGAC GCTTTTGTCGGCGCCGCTGATGCCGACACGGCCGTCGCATTCATCACCACGCCCGACAACCCGTCCGGCTACTGCCCCCC GGTCGAAGAAATAATCGATCTTGCGCGGCGTCTTCCTTCATCATGTCTGCTGGTAGTGGACGAAGCCTACATGGATTTTG CCGATGACCCTGCCGCCCACTCTGTTCTGCCGCACCTGACAGAATTTCCCAATGTGGCAGTGCTGCGTACTTTTTCAAAA AGTTACGGGCTGGCCGGTCTGCGTCTGGGTTTCGGCGTTATGCATCCCGCCCTTGCTGACTATGTAAAAAGGGTGCGGCT GCCTTTCAGCATCAACATACTGGCAGAGTACGCAGGCATAGCGGCACTGCAGGACACCACATTCCACGCGCAGACCCTGC GTGTAACCCGCGAAGGCAGAACCTATCTGACCGGCGCGCTGACCGAGGCCGGATGCACGGTGTACCCTTCCGCAGCCAAC TTCATCATGTTCGCGCTGCCGGAAAACTGCCCGCACGATGCGCGCGCGGTATTCGAGGCACTGCTGCGCCGCGGTATCAT CATACGTCCGCTAAGCAGCTACAACCTGCCGCAGTGTCTGCGGGTCAGCATAGGCAACAGGCACGAAAACGAGCTGTTCA TAGCTCAGTTCAAGGAGCTTCTCCGTGGCTGA
Upstream 100 bases:
>100_bases GGCGCCTTGCCCTGACGCAAAAGGTGGATTATCCAGAGGGGCGGTTCTCACGAACCGTCCCTTTTTTGCTACAGTTCCAT ACCTGCAAAGGAGCACCCCC
Downstream 100 bases:
>100_bases ACACATCATTGTCACACTGGACGGCCCCGCCGGAGTGGGTAAAACCACACTGGCCCGCAATATAGCCGAAGAGCTGGGCA TAGCGTATATGGATACCGGA
Product: histidinol phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MTEPAKREDSGLPEAVTAIRPEVAAFKPYAPGLSIDEIKERYGLSQVVKMASNENPLGTSPLVQQTLRTHADLAFRYVQS GNPRLVSAIARSFGVAAESVVTGNGSDEVIDLIIRVKARPGKHNIVAFNPCFSMYELQTRFCGVEFRQVPLRADFSFDYD AFVGAADADTAVAFITTPDNPSGYCPPVEEIIDLARRLPSSCLLVVDEAYMDFADDPAAHSVLPHLTEFPNVAVLRTFSK SYGLAGLRLGFGVMHPALADYVKRVRLPFSINILAEYAGIAALQDTTFHAQTLRVTREGRTYLTGALTEAGCTVYPSAAN FIMFALPENCPHDARAVFEALLRRGIIIRPLSSYNLPQCLRVSIGNRHENELFIAQFKELLRG
Sequences:
>Translated_383_residues MTEPAKREDSGLPEAVTAIRPEVAAFKPYAPGLSIDEIKERYGLSQVVKMASNENPLGTSPLVQQTLRTHADLAFRYVQS GNPRLVSAIARSFGVAAESVVTGNGSDEVIDLIIRVKARPGKHNIVAFNPCFSMYELQTRFCGVEFRQVPLRADFSFDYD AFVGAADADTAVAFITTPDNPSGYCPPVEEIIDLARRLPSSCLLVVDEAYMDFADDPAAHSVLPHLTEFPNVAVLRTFSK SYGLAGLRLGFGVMHPALADYVKRVRLPFSINILAEYAGIAALQDTTFHAQTLRVTREGRTYLTGALTEAGCTVYPSAAN FIMFALPENCPHDARAVFEALLRRGIIIRPLSSYNLPQCLRVSIGNRHENELFIAQFKELLRG >Mature_382_residues TEPAKREDSGLPEAVTAIRPEVAAFKPYAPGLSIDEIKERYGLSQVVKMASNENPLGTSPLVQQTLRTHADLAFRYVQSG NPRLVSAIARSFGVAAESVVTGNGSDEVIDLIIRVKARPGKHNIVAFNPCFSMYELQTRFCGVEFRQVPLRADFSFDYDA FVGAADADTAVAFITTPDNPSGYCPPVEEIIDLARRLPSSCLLVVDEAYMDFADDPAAHSVLPHLTEFPNVAVLRTFSKS YGLAGLRLGFGVMHPALADYVKRVRLPFSINILAEYAGIAALQDTTFHAQTLRVTREGRTYLTGALTEAGCTVYPSAANF IMFALPENCPHDARAVFEALLRRGIIIRPLSSYNLPQCLRVSIGNRHENELFIAQFKELLRG
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=340, Percent_Identity=30.8823529411765, Blast_Score=142, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6322075, Length=384, Percent_Identity=28.90625, Blast_Score=137, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_DESDG (Q311Z4)
Other databases:
- EMBL: CP000112 - RefSeq: YP_387947.1 - ProteinModelPortal: Q311Z4 - SMR: Q311Z4 - STRING: Q311Z4 - GeneID: 3756084 - GenomeReviews: CP000112_GR - KEGG: dde:Dde_1453 - NMPDR: fig|207559.3.peg.660 - eggNOG: COG0079 - HOGENOM: HBG646350 - OMA: VAFNPCF - ProtClustDB: CLSK705005 - BioCyc: DDES207559:DDE_1453-MONOMER - HAMAP: MF_01023 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 42030; Mature: 41899
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPAKREDSGLPEAVTAIRPEVAAFKPYAPGLSIDEIKERYGLSQVVKMASNENPLGTS CCCCCCCCCCCCCHHHHHHCCHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCC PLVQQTLRTHADLAFRYVQSGNPRLVSAIARSFGVAAESVVTGNGSDEVIDLIIRVKARP HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHEEECCCCHHHEEEHHHEECCC GKHNIVAFNPCFSMYELQTRFCGVEFRQVPLRADFSFDYDAFVGAADADTAVAFITTPDN CCCCEEEECCCHHHHHHHHHHCCCCCEEECEEECCCCCHHHHCCCCCCCCEEEEEECCCC PSGYCPPVEEIIDLARRLPSSCLLVVDEAYMDFADDPAAHSVLPHLTEFPNVAVLRTFSK CCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHH SYGLAGLRLGFGVMHPALADYVKRVRLPFSINILAEYAGIAALQDTTFHAQTLRVTREGR HCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCHHEECCCCEEHEEEEEEECCC TYLTGALTEAGCTVYPSAANFIMFALPENCPHDARAVFEALLRRGIIIRPLSSYNLPQCL EEEEEEHHCCCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCHHH RVSIGNRHENELFIAQFKELLRG HHHCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure TEPAKREDSGLPEAVTAIRPEVAAFKPYAPGLSIDEIKERYGLSQVVKMASNENPLGTS CCCCCCCCCCCCHHHHHHCCHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCC PLVQQTLRTHADLAFRYVQSGNPRLVSAIARSFGVAAESVVTGNGSDEVIDLIIRVKARP HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHEEECCCCHHHEEEHHHEECCC GKHNIVAFNPCFSMYELQTRFCGVEFRQVPLRADFSFDYDAFVGAADADTAVAFITTPDN CCCCEEEECCCHHHHHHHHHHCCCCCEEECEEECCCCCHHHHCCCCCCCCEEEEEECCCC PSGYCPPVEEIIDLARRLPSSCLLVVDEAYMDFADDPAAHSVLPHLTEFPNVAVLRTFSK CCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHH SYGLAGLRLGFGVMHPALADYVKRVRLPFSINILAEYAGIAALQDTTFHAQTLRVTREGR HCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCHHEECCCCEEHEEEEEEECCC TYLTGALTEAGCTVYPSAANFIMFALPENCPHDARAVFEALLRRGIIIRPLSSYNLPQCL EEEEEEHHCCCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCHHH RVSIGNRHENELFIAQFKELLRG HHHCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA