| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356465
Identifier: 78356465
GI number: 78356465
Start: 1443226
End: 1444410
Strand: Direct
Name: 78356465
Synonym: Dde_1420
Alternate gene names: NA
Gene position: 1443226-1444410 (Clockwise)
Preceding gene: 78356464
Following gene: 78356466
Centisome position: 38.69
GC content: 60.68
Gene sequence:
>1185_bases ATGGAAAACACGCGTGGCCGGGGCGTTACCGCCGCCTTTCTGCATACTGTCTGCCGCCTGACTGCGCGCGGACGGCAGAG TATGTGCAAACGCTGCATGCTGGCGGCCGGAGTCTGGCTGTGTGTTGTCATACCGCTGACATGTCTCGGAGGCGGTGCAA GACCCGCCGCTGCTCCTGAAAAGGCGGCGTCCGGAACTGCTCAGGATGTCAGGAGCAACGCCGCGGCGCAGGCGGCTGCA GACCGTGCAGGCCGCGATGCCGGCACACAGCCTGAGCCCCGTGTTCAGACATTGGCCGATGCAGCGGATACAGTGCGCAA CGGTGCGGCGGCGGATCCGGCCCCCGACGGAGTTCCGGGCAGGAAAAATGCAACAGCGGCCCGGAACAGTACAGCAACCG CGCCGGACGGAGTGCCGGACCGGAGGGCAGAAAGTGAAGACCGGGCAGGGAGCAGCAATCCTCCTGTCTTCAGCATCCGT CGTTCTGTTTCTGCTGACGGCGCGACGGCGCCGCAAGCGCGTGCAGCAGCGCGGAATAATGCATCCGGTAGTATAAAGGT AATCGGCGGGGCACAGAAAGAAGGCGTGCGGTTGTTTAACACCGTGGCGTTTCGCGGTCCGCTGAAGGCCTTGCCCAAAT GGGAACGTGTGCTGCGCGAAAACCGTCGTAATCCGGTGCTGCAGAAGCAGACTGTGTCCGGTCCGGATGCACCGGCAGGC GGCAGAGGAGAAGGGTGGAAGTCCGTAGCGGCCAGAGCTGCCGGAGCACCGCCCATGGAAAAGCTGCGTATGGTCAATGC GTTTTTTAACCGCTGGCCCTACCGGCTGGATGTGGAAATTTACGGAGTATCTGATTTCTGGGCCACTCCTGCGGAGTTCA TGCGTCACTCCGGCGACTGCGAGGACTACGCCATAAGCAAATATTTTGCGCTGCGGATGCTGGGCTTTCCGGCCGACGCG TTGCGTATTGTGGTGCTTCTTGATTCCATCCGCGGCATAGGGTATGCGGTGCTGGTGGTTTTTCTGGACGCAAAGGCTTA CGTCCTTGATAATCTTTCTGATCTTGTGTTGACGCACGACCGGTATTCCCATTACCGGCCGCAATATTCGGTGAATGAAG AGTACCGCTGGGCGCACATTCCCGTGCGGCCTGCCGCAACAGGCAAAGCGGAAGGAAAACAATAG
Upstream 100 bases:
>100_bases TGATGGCCACGGTGGATATTCTTACGGGCAAAAAGACCGTGCTCGATTACCTGCTTAAGCCCATTCTGAAGGCCAGACAG AACGCGCTCAGGGAGCGTTG
Downstream 100 bases:
>100_bases ATTTTGGAGACTACCATGGCAGAAACTGCTTCCGACAGAACGCGTGAGCTGAGCCGCGGCAGCGGCAGAACCGGAGCCGG ATCAAAGTTGTTGTGGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase Family Protein Cysteine Peptidase BTLCP; Periplasmic Protein-Like Protein; Sulfate Adenylyltransferase Small Subunit; Signal Peptide; Transglutaminase Domain Protein; Sulfate Adenylyltransferase; Lipoprotein
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MENTRGRGVTAAFLHTVCRLTARGRQSMCKRCMLAAGVWLCVVIPLTCLGGGARPAAAPEKAASGTAQDVRSNAAAQAAA DRAGRDAGTQPEPRVQTLADAADTVRNGAAADPAPDGVPGRKNATAARNSTATAPDGVPDRRAESEDRAGSSNPPVFSIR RSVSADGATAPQARAAARNNASGSIKVIGGAQKEGVRLFNTVAFRGPLKALPKWERVLRENRRNPVLQKQTVSGPDAPAG GRGEGWKSVAARAAGAPPMEKLRMVNAFFNRWPYRLDVEIYGVSDFWATPAEFMRHSGDCEDYAISKYFALRMLGFPADA LRIVVLLDSIRGIGYAVLVVFLDAKAYVLDNLSDLVLTHDRYSHYRPQYSVNEEYRWAHIPVRPAATGKAEGKQ
Sequences:
>Translated_394_residues MENTRGRGVTAAFLHTVCRLTARGRQSMCKRCMLAAGVWLCVVIPLTCLGGGARPAAAPEKAASGTAQDVRSNAAAQAAA DRAGRDAGTQPEPRVQTLADAADTVRNGAAADPAPDGVPGRKNATAARNSTATAPDGVPDRRAESEDRAGSSNPPVFSIR RSVSADGATAPQARAAARNNASGSIKVIGGAQKEGVRLFNTVAFRGPLKALPKWERVLRENRRNPVLQKQTVSGPDAPAG GRGEGWKSVAARAAGAPPMEKLRMVNAFFNRWPYRLDVEIYGVSDFWATPAEFMRHSGDCEDYAISKYFALRMLGFPADA LRIVVLLDSIRGIGYAVLVVFLDAKAYVLDNLSDLVLTHDRYSHYRPQYSVNEEYRWAHIPVRPAATGKAEGKQ >Mature_394_residues MENTRGRGVTAAFLHTVCRLTARGRQSMCKRCMLAAGVWLCVVIPLTCLGGGARPAAAPEKAASGTAQDVRSNAAAQAAA DRAGRDAGTQPEPRVQTLADAADTVRNGAAADPAPDGVPGRKNATAARNSTATAPDGVPDRRAESEDRAGSSNPPVFSIR RSVSADGATAPQARAAARNNASGSIKVIGGAQKEGVRLFNTVAFRGPLKALPKWERVLRENRRNPVLQKQTVSGPDAPAG GRGEGWKSVAARAAGAPPMEKLRMVNAFFNRWPYRLDVEIYGVSDFWATPAEFMRHSGDCEDYAISKYFALRMLGFPADA LRIVVLLDSIRGIGYAVLVVFLDAKAYVLDNLSDLVLTHDRYSHYRPQYSVNEEYRWAHIPVRPAATGKAEGKQ
Specific function: Unknown
COG id: COG3672
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42208; Mature: 42208
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENTRGRGVTAAFLHTVCRLTARGRQSMCKRCMLAAGVWLCVVIPLTCLGGGARPAAAPE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH KAASGTAQDVRSNAAAQAAADRAGRDAGTQPEPRVQTLADAADTVRNGAAADPAPDGVPG HHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC RKNATAARNSTATAPDGVPDRRAESEDRAGSSNPPVFSIRRSVSADGATAPQARAAARNN CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCEEEEHHHCCCCCCCCCHHHHHHCCC ASGSIKVIGGAQKEGVRLFNTVAFRGPLKALPKWERVLRENRRNPVLQKQTVSGPDAPAG CCCEEEEEECCCCCCHHHHHHHHHCCCHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GRGEGWKSVAARAAGAPPMEKLRMVNAFFNRWPYRLDVEIYGVSDFWATPAEFMRHSGDC CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEEECHHHHCCHHHHHHCCCCC EDYAISKYFALRMLGFPADALRIVVLLDSIRGIGYAVLVVFLDAKAYVLDNLSDLVLTHD HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCHHHHHEECC RYSHYRPQYSVNEEYRWAHIPVRPAATGKAEGKQ HHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MENTRGRGVTAAFLHTVCRLTARGRQSMCKRCMLAAGVWLCVVIPLTCLGGGARPAAAPE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH KAASGTAQDVRSNAAAQAAADRAGRDAGTQPEPRVQTLADAADTVRNGAAADPAPDGVPG HHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC RKNATAARNSTATAPDGVPDRRAESEDRAGSSNPPVFSIRRSVSADGATAPQARAAARNN CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCEEEEHHHCCCCCCCCCHHHHHHCCC ASGSIKVIGGAQKEGVRLFNTVAFRGPLKALPKWERVLRENRRNPVLQKQTVSGPDAPAG CCCEEEEEECCCCCCHHHHHHHHHCCCHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GRGEGWKSVAARAAGAPPMEKLRMVNAFFNRWPYRLDVEIYGVSDFWATPAEFMRHSGDC CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEEECHHHHCCHHHHHHCCCCC EDYAISKYFALRMLGFPADALRIVVLLDSIRGIGYAVLVVFLDAKAYVLDNLSDLVLTHD HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCHHHHHEECC RYSHYRPQYSVNEEYRWAHIPVRPAATGKAEGKQ HHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA