Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78356358

Identifier: 78356358

GI number: 78356358

Start: 1329789

End: 1330442

Strand: Direct

Name: 78356358

Synonym: Dde_1311

Alternate gene names: NA

Gene position: 1329789-1330442 (Clockwise)

Preceding gene: 78356357

Following gene: 78356360

Centisome position: 35.65

GC content: 57.34

Gene sequence:

>654_bases
ATGGCATTGCAGAAGCGGCTTGATGCGGTAAGCAGACGTCTGGAAAGTCAGTTGCCGCGCGAGATAATTGCGGTGATGGA
TACCGTTGCAACGCAGCTGCGGCTGGCTGATGTGCAGGGAAAAGCGGCACGGCAGGGGGCATATGCTCCCATGTTCAGTA
TGCGTGATATGCTGGGCAACGTGATCAATCCTGTGGACAGGTTGCTGCAGGGGCCTGTGCTGATCAGTTTTTTCAGAGGA
AAATGGTGCAGGTACTGCATCGAGGAACTGCTGGAACTTAATGTGCTGGCGGCACAGGTGCGGCAGGCCGGTGGCAGCAT
CATTGCTGTTACCCCTCAGTTGCCCCGTTTTAACAGGGCCATGGCGTACGAGTGCTCACTGGGGTTTGATGTTCTGACTG
ATACGGGCTGCCGCATGGCTTCGGCGATGGGGCTTGCCTATCAGGTGCCGCCGGCGGTGAAGAATCTTTTTGTACATTTC
GGCATTGACCTGGCCAGATATAACGGAGCTTCGGGGTGGCATCTTCCTGTCACGTCGCGGTATGTGGTCGGCACAGACGG
TCGTATTGCCTGCGCCCATATTGATCTGGACTACAGCAGGCGGACACCGCCGGAAGAAACGCTGGGCGTTTTGCGGTCTC
TGGGCGCGGCCTGA

Upstream 100 bases:

>100_bases
TTTAATGTTTGCCAAAAATAACATTCGCCATTATATTTTTATAATAGTTATCGTTTAGTGGACAATTGCGGATCGGATGT
GCGCAATCATCGGGGGCTGT

Downstream 100 bases:

>100_bases
CAATCCCTTCCGGCTGCAACTGTGGCCGGCCGCCTTGTTGCATAAAAAAAGACATCGCATTGCGATGTCTTTTTTATGGC
GCGGTCATGCTCTGCCGTGC

Product: peroxiredoxin-like protein

Products: NA

Alternate protein names: Peroxiredoxin; Peroxiredoxin-Like Protein; Redoxin Superfamily; Redoxin; Redoxin Domain-Containing Protein; Peroxiredoxin/AhpC/Tsa Family Protein; Antioxidant AhpC/TSA Family; AhpC/Tsa Family Protein Selenocysteine-Containing; AhpC-TSA; Alkyl Hydroperoxide Reductase; Helix-Turn-Helix Fis-Type; Antioxidant AhpC/TSA Family Protein; Peroxiredoxin Family Protein

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MALQKRLDAVSRRLESQLPREIIAVMDTVATQLRLADVQGKAARQGAYAPMFSMRDMLGNVINPVDRLLQGPVLISFFRG
KWCRYCIEELLELNVLAAQVRQAGGSIIAVTPQLPRFNRAMAYECSLGFDVLTDTGCRMASAMGLAYQVPPAVKNLFVHF
GIDLARYNGASGWHLPVTSRYVVGTDGRIACAHIDLDYSRRTPPEETLGVLRSLGAA

Sequences:

>Translated_217_residues
MALQKRLDAVSRRLESQLPREIIAVMDTVATQLRLADVQGKAARQGAYAPMFSMRDMLGNVINPVDRLLQGPVLISFFRG
KWCRYCIEELLELNVLAAQVRQAGGSIIAVTPQLPRFNRAMAYECSLGFDVLTDTGCRMASAMGLAYQVPPAVKNLFVHF
GIDLARYNGASGWHLPVTSRYVVGTDGRIACAHIDLDYSRRTPPEETLGVLRSLGAA
>Mature_216_residues
ALQKRLDAVSRRLESQLPREIIAVMDTVATQLRLADVQGKAARQGAYAPMFSMRDMLGNVINPVDRLLQGPVLISFFRGK
WCRYCIEELLELNVLAAQVRQAGGSIIAVTPQLPRFNRAMAYECSLGFDVLTDTGCRMASAMGLAYQVPPAVKNLFVHFG
IDLARYNGASGWHLPVTSRYVVGTDGRIACAHIDLDYSRRTPPEETLGVLRSLGAA

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23869; Mature: 23738

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALQKRLDAVSRRLESQLPREIIAVMDTVATQLRLADVQGKAARQGAYAPMFSMRDMLGN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHH
VINPVDRLLQGPVLISFFRGKWCRYCIEELLELNVLAAQVRQAGGSIIAVTPQLPRFNRA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
MAYECSLGFDVLTDTGCRMASAMGLAYQVPPAVKNLFVHFGIDLARYNGASGWHLPVTSR
EEEECCCCCHHHHCCCHHHHHHCCCCEECCHHHHHHHHHHCCCCEEECCCCCCCCCCCCE
YVVGTDGRIACAHIDLDYSRRTPPEETLGVLRSLGAA
EEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
ALQKRLDAVSRRLESQLPREIIAVMDTVATQLRLADVQGKAARQGAYAPMFSMRDMLGN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHH
VINPVDRLLQGPVLISFFRGKWCRYCIEELLELNVLAAQVRQAGGSIIAVTPQLPRFNRA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
MAYECSLGFDVLTDTGCRMASAMGLAYQVPPAVKNLFVHFGIDLARYNGASGWHLPVTSR
EEEECCCCCHHHHCCCHHHHHHCCCCEECCHHHHHHHHHHCCCCEEECCCCCCCCCCCCE
YVVGTDGRIACAHIDLDYSRRTPPEETLGVLRSLGAA
EEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA