Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is 78356357

Identifier: 78356357

GI number: 78356357

Start: 1328744

End: 1329565

Strand: Direct

Name: 78356357

Synonym: Dde_1310

Alternate gene names: NA

Gene position: 1328744-1329565 (Clockwise)

Preceding gene: 78356356

Following gene: 78356358

Centisome position: 35.62

GC content: 59.0

Gene sequence:

>822_bases
ATGAACCGCGTAATTGCCATGCTGATTCTTGGCGTGCTGCTTACCGCCATGGTGCTGATCGTGGCTAACTACATGTCGCG
TCCTGATGTGCCGGCCAACTATGCACAGGAAGAAACCGTGCCTTCCGTGGCTGTGCCTGCCCCGCAGGACGGCAACGCCA
CTCAGCCGGAAAACGTTGATCTGCGCAGCATGCTGCAAAAGCCTGCCGCCGTGCCCGAAGATCTGCCCGAAACCGTGGAC
GGCGGGCTGCCTCAGCCCGAACCTGTGGCTCCGGGAGCGGCAACCCCCGGAAGCGGCGAAAATGCGAGCGTGCCCGCTCC
GCCGGCGGTTGACCTGAACGCCGTGCGCGCCGCGGCGCCGCAGAAAGACACCGCACAGGATGACGTTGCCGCTGTGTCCG
GCGGCAGTGAAGAACCGGTGAAACAGGCTCAGCCTGCCGCACCTTCCGTGGCGGAAAAAACTCAGCCTGCGGCTGCCGCG
CCTGTCGTTAAAAAAGAACCCTCCGTGCGCAAAACCGGAGCCATAACAATGGAGGCATCCGGTTTCCGCTTCGACGGCAG
CAAGCTTATTTTTTATGTCAGAGGGTCGCGTCCGTTCGAGCATTCGGTGTTTACGCTGAGCAAGCCCGACAGGCTGGTTG
TGGATGTGAAGGGGGCGTGGACAAAGGTCAGCACGCCGCAGACACCTTCCAACCGCCTTGTGAAAAACACCCGCTCCGGC
GTGTACAAAGATCACGTCAGATTTGTTCTTGATCTTAAAGCTCCTCTTGTGTCGCATACTGCAAAAATGCAGGGTAATGA
GCTTGTGATCATAATGAATTGA

Upstream 100 bases:

>100_bases
CGATGAATCCGCAGCTTGAAGCGTCGAAGCGCTTCAAAGAGTATATTCTTAACCATGAGAAACATGGCCGCTAGCGCCAT
GAGACCACCGGAGTGAATAC

Downstream 100 bases:

>100_bases
TGTTCTGAAAGCCTATATACTGTTTTTTCTGTTCAAGCGTCCTCAGCCTGCAGGCTGAGGACGCTTGTTTTGTGGTGTGC
AAGAGAATGTGCTGTTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MNRVIAMLILGVLLTAMVLIVANYMSRPDVPANYAQEETVPSVAVPAPQDGNATQPENVDLRSMLQKPAAVPEDLPETVD
GGLPQPEPVAPGAATPGSGENASVPAPPAVDLNAVRAAAPQKDTAQDDVAAVSGGSEEPVKQAQPAAPSVAEKTQPAAAA
PVVKKEPSVRKTGAITMEASGFRFDGSKLIFYVRGSRPFEHSVFTLSKPDRLVVDVKGAWTKVSTPQTPSNRLVKNTRSG
VYKDHVRFVLDLKAPLVSHTAKMQGNELVIIMN

Sequences:

>Translated_273_residues
MNRVIAMLILGVLLTAMVLIVANYMSRPDVPANYAQEETVPSVAVPAPQDGNATQPENVDLRSMLQKPAAVPEDLPETVD
GGLPQPEPVAPGAATPGSGENASVPAPPAVDLNAVRAAAPQKDTAQDDVAAVSGGSEEPVKQAQPAAPSVAEKTQPAAAA
PVVKKEPSVRKTGAITMEASGFRFDGSKLIFYVRGSRPFEHSVFTLSKPDRLVVDVKGAWTKVSTPQTPSNRLVKNTRSG
VYKDHVRFVLDLKAPLVSHTAKMQGNELVIIMN
>Mature_273_residues
MNRVIAMLILGVLLTAMVLIVANYMSRPDVPANYAQEETVPSVAVPAPQDGNATQPENVDLRSMLQKPAAVPEDLPETVD
GGLPQPEPVAPGAATPGSGENASVPAPPAVDLNAVRAAAPQKDTAQDDVAAVSGGSEEPVKQAQPAAPSVAEKTQPAAAA
PVVKKEPSVRKTGAITMEASGFRFDGSKLIFYVRGSRPFEHSVFTLSKPDRLVVDVKGAWTKVSTPQTPSNRLVKNTRSG
VYKDHVRFVLDLKAPLVSHTAKMQGNELVIIMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28781; Mature: 28781

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRVIAMLILGVLLTAMVLIVANYMSRPDVPANYAQEETVPSVAVPAPQDGNATQPENVD
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEECCCCCCCCCCCCCCCC
LRSMLQKPAAVPEDLPETVDGGLPQPEPVAPGAATPGSGENASVPAPPAVDLNAVRAAAP
HHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
QKDTAQDDVAAVSGGSEEPVKQAQPAAPSVAEKTQPAAAAPVVKKEPSVRKTGAITMEAS
CCCCCHHHHHHHCCCCCCCHHHCCCCCCCHHHHCCCCHHCCCCCCCCCCCCCCEEEEECC
GFRFDGSKLIFYVRGSRPFEHSVFTLSKPDRLVVDVKGAWTKVSTPQTPSNRLVKNTRSG
CEEECCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCEEECCCCCCCHHHHHHHHHCC
VYKDHVRFVLDLKAPLVSHTAKMQGNELVIIMN
HHHHHHEEEEEHHCHHHHHHHHCCCCEEEEEEC
>Mature Secondary Structure
MNRVIAMLILGVLLTAMVLIVANYMSRPDVPANYAQEETVPSVAVPAPQDGNATQPENVD
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEECCCCCCCCCCCCCCCC
LRSMLQKPAAVPEDLPETVDGGLPQPEPVAPGAATPGSGENASVPAPPAVDLNAVRAAAP
HHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
QKDTAQDDVAAVSGGSEEPVKQAQPAAPSVAEKTQPAAAAPVVKKEPSVRKTGAITMEAS
CCCCCHHHHHHHCCCCCCCHHHCCCCCCCHHHHCCCCHHCCCCCCCCCCCCCCEEEEECC
GFRFDGSKLIFYVRGSRPFEHSVFTLSKPDRLVVDVKGAWTKVSTPQTPSNRLVKNTRSG
CEEECCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCEEECCCCCCCHHHHHHHHHCC
VYKDHVRFVLDLKAPLVSHTAKMQGNELVIIMN
HHHHHHEEEEEHHCHHHHHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA