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The map label for this gene is dpaL [H]

Identifier: 78356313

GI number: 78356313

Start: 1280934

End: 1282154

Strand: Direct

Name: dpaL [H]

Synonym: Dde_1266

Alternate gene names: 78356313

Gene position: 1280934-1282154 (Clockwise)

Preceding gene: 78356312

Following gene: 78356314

Centisome position: 34.34

GC content: 59.21

Gene sequence:

>1221_bases
ATGAGTAACATCCGTTTTATTGCCAACCAGAAGGCCAGACAGCAGACAGACAAGGTGGACGTGAGCTTTCTGTCCTGCGC
AGAGGCGGAAGTCGTCCGCGGTTTCTTTAAGACCTTTGAAGGGTATGAACCCACTCCTCTTGTCGGTTTGAAAGGACTGG
CCGCAGAACTGGGCGTATCGTCTTTCTACCTTAAGGATGAATCCAAACGTTTTGGCCTGAACGCCTTCAAGGTGCTTGGC
GGGGGCTATGCCATAGCCAAGCACATCTGCCGGCGTCTGGGCGTGCCCATTGCCGAGATGAGCATGGAACGTCTGTGCTC
TGCGGAAGTGCGTGAAGCGCTGGGTGAAGTGACGTTTGTTTCGGCCACGGACGGAAACCACGGCCGCGGTGTGGCATGGG
CTGCCAACCGTATGGGACAGAAATCCGTTATCTATATGCCCAAAGGCTCCGCCGTAACGCGGCTTGAAAATATCCGCGCA
GAAGGAGCACAGGCCAGCATAACCGACCTGAACTACGATGACGCTGTGCGTCTTGCATGGAAAGATTCGCAGGAAAAAGG
TTGGGTTATGGTGCAGGATACCGCGTGGGAAGGCTACGAGGAAATTCCCGGCTGGATCATGCAGGGATACACCACGCTGG
CGCTTGAAGCTCTGGAAGAGTTTGAACGGCAGGAAGGCGAAGCCCCCACGCATGTGTTTCTGCAGGCGGGAGTGGGGTCC
TTTGCCGGTGGCGTTCAGGGGCTGCTGGCTCAGCGCTACGGCGAGCGCCGCCCTGTAACCGCAGTGGTGGAACCGGAACT
GGCTGACTGCATTTTCCGTTCTGCCGCCGCTGCTGACGGCAATCCGCACTTTGTCACCGGCGACATGCCCACGGTGATGG
CCGGTCTGGCCTGCGGCGAGCCGAACACGGTGGGCTGGAGCATTCTGCGCGACTACAGCGACGGCTACATATCATGCCCC
GACTGGGTGGCCGCCAACGGCATGCGTATTCTTGCCAGCCCGCGGCCCGGAGATGCCCGTGTCATTTCCGGAGAATCCGG
CGCAGTGACCACCGGCATAGTGGAATGCCTCATGCGTATGCCCGACATGGCTCCCGTGCGCGAGGCTCTGGAACTGGACG
GCGACTCGCGCGTGCTGGTCATCAGCACCGAAGGCGACACCGACCCTGTGATGTACCGCAAGATTGTCTGGCAGGGCGCC
TACCCTGAAATTGAAGGATAA

Upstream 100 bases:

>100_bases
CCACCGCATTTCCCGCCCGCAGCTGCGTGCAGGTAGCCGCCCTGCCCAAGGATGCGCTTGTGGAAATCGAACTCATTGCC
GAAGTGTAGGTCGCAGTTTC

Downstream 100 bases:

>100_bases
AAAGGTATCACCGTGTTGAATGAACAAGTGAAGAAAAGCGTTGTGGACCTGTGCGCTGCCGTTATCCGGCAGCCCAGCGT
CTCGGGCGAGGAAGCCGGTG

Product: diaminopropionate ammonia-lyase

Products: NA

Alternate protein names: Diaminopropionatase; Alpha,beta-diaminopropionate ammonia-lyase [H]

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSNIRFIANQKARQQTDKVDVSFLSCAEAEVVRGFFKTFEGYEPTPLVGLKGLAAELGVSSFYLKDESKRFGLNAFKVLG
GGYAIAKHICRRLGVPIAEMSMERLCSAEVREALGEVTFVSATDGNHGRGVAWAANRMGQKSVIYMPKGSAVTRLENIRA
EGAQASITDLNYDDAVRLAWKDSQEKGWVMVQDTAWEGYEEIPGWIMQGYTTLALEALEEFERQEGEAPTHVFLQAGVGS
FAGGVQGLLAQRYGERRPVTAVVEPELADCIFRSAAAADGNPHFVTGDMPTVMAGLACGEPNTVGWSILRDYSDGYISCP
DWVAANGMRILASPRPGDARVISGESGAVTTGIVECLMRMPDMAPVREALELDGDSRVLVISTEGDTDPVMYRKIVWQGA
YPEIEG

Sequences:

>Translated_406_residues
MSNIRFIANQKARQQTDKVDVSFLSCAEAEVVRGFFKTFEGYEPTPLVGLKGLAAELGVSSFYLKDESKRFGLNAFKVLG
GGYAIAKHICRRLGVPIAEMSMERLCSAEVREALGEVTFVSATDGNHGRGVAWAANRMGQKSVIYMPKGSAVTRLENIRA
EGAQASITDLNYDDAVRLAWKDSQEKGWVMVQDTAWEGYEEIPGWIMQGYTTLALEALEEFERQEGEAPTHVFLQAGVGS
FAGGVQGLLAQRYGERRPVTAVVEPELADCIFRSAAAADGNPHFVTGDMPTVMAGLACGEPNTVGWSILRDYSDGYISCP
DWVAANGMRILASPRPGDARVISGESGAVTTGIVECLMRMPDMAPVREALELDGDSRVLVISTEGDTDPVMYRKIVWQGA
YPEIEG
>Mature_405_residues
SNIRFIANQKARQQTDKVDVSFLSCAEAEVVRGFFKTFEGYEPTPLVGLKGLAAELGVSSFYLKDESKRFGLNAFKVLGG
GYAIAKHICRRLGVPIAEMSMERLCSAEVREALGEVTFVSATDGNHGRGVAWAANRMGQKSVIYMPKGSAVTRLENIRAE
GAQASITDLNYDDAVRLAWKDSQEKGWVMVQDTAWEGYEEIPGWIMQGYTTLALEALEEFERQEGEAPTHVFLQAGVGSF
AGGVQGLLAQRYGERRPVTAVVEPELADCIFRSAAAADGNPHFVTGDMPTVMAGLACGEPNTVGWSILRDYSDGYISCPD
WVAANGMRILASPRPGDARVISGESGAVTTGIVECLMRMPDMAPVREALELDGDSRVLVISTEGDTDPVMYRKIVWQGAY
PEIEG

Specific function: Catalyzes the alpha,beta-elimination reaction of both L- and D-alpha,beta-diaminopropionate, the most suitable substrates to form pyruvate and ammonia. The L- and D-isomers of serine are also degraded, though slowly; it is the only serine dehydratase whic

COG id: COG1171

COG function: function code E; Threonine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789235, Length=380, Percent_Identity=52.8947368421053, Blast_Score=396, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010081
- InterPro:   IPR019871
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.3.1.15 [H]

Molecular weight: Translated: 44086; Mature: 43955

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIRFIANQKARQQTDKVDVSFLSCAEAEVVRGFFKTFEGYEPTPLVGLKGLAAELGVS
CCCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
SFYLKDESKRFGLNAFKVLGGGYAIAKHICRRLGVPIAEMSMERLCSAEVREALGEVTFV
EEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEE
SATDGNHGRGVAWAANRMGQKSVIYMPKGSAVTRLENIRAEGAQASITDLNYDDAVRLAW
EECCCCCCCEEEEHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEE
KDSQEKGWVMVQDTAWEGYEEIPGWIMQGYTTLALEALEEFERQEGEAPTHVFLQAGVGS
CCCCCCCEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH
FAGGVQGLLAQRYGERRPVTAVVEPELADCIFRSAAAADGNPHFVTGDMPTVMAGLACGE
HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCC
PNTVGWSILRDYSDGYISCPDWVAANGMRILASPRPGDARVISGESGAVTTGIVECLMRM
CCCCHHHHHHHCCCCEEECCCHHHCCCEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHC
PDMAPVREALELDGDSRVLVISTEGDTDPVMYRKIVWQGAYPEIEG
CCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SNIRFIANQKARQQTDKVDVSFLSCAEAEVVRGFFKTFEGYEPTPLVGLKGLAAELGVS
CCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
SFYLKDESKRFGLNAFKVLGGGYAIAKHICRRLGVPIAEMSMERLCSAEVREALGEVTFV
EEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEE
SATDGNHGRGVAWAANRMGQKSVIYMPKGSAVTRLENIRAEGAQASITDLNYDDAVRLAW
EECCCCCCCEEEEHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEE
KDSQEKGWVMVQDTAWEGYEEIPGWIMQGYTTLALEALEEFERQEGEAPTHVFLQAGVGS
CCCCCCCEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH
FAGGVQGLLAQRYGERRPVTAVVEPELADCIFRSAAAADGNPHFVTGDMPTVMAGLACGE
HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCC
PNTVGWSILRDYSDGYISCPDWVAANGMRILASPRPGDARVISGESGAVTTGIVECLMRM
CCCCHHHHHHHCCCCEEECCCHHHCCCEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHC
PDMAPVREALELDGDSRVLVISTEGDTDPVMYRKIVWQGAYPEIEG
CCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11677609; 3275662 [H]