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The map label for this gene is frdC [H]

Identifier: 78356305

GI number: 78356305

Start: 1272950

End: 1273606

Strand: Reverse

Name: frdC [H]

Synonym: Dde_1258

Alternate gene names: 78356305

Gene position: 1273606-1272950 (Counterclockwise)

Preceding gene: 78356306

Following gene: 78356304

Centisome position: 34.14

GC content: 55.1

Gene sequence:

>657_bases
ATGAACTCCAGCACCGTAACGCTTCATGTTCCCCAGCGGAGCAAACTGGCAGGCAGGCTCGACTTCCTCCAGATGCTCTC
GGGTGTCCTGTTGATTCTCTTCTTATGGGCGCACCTGCTGCTGGTCTCCAGCGTCATCCTGAGCCCCCGGCTGATGAACG
CCATTGCATGGTTTTTCGAGGCAACATTCATGGCGCAGATAGGCGGGCCGGTCATTTTTGCGCTCATGCTTTTCCACTTC
ATTCTTGCCGGACGCAAGATGCCCTTCCGCACGACGGAGCAAAGAGCTTTTCTGCGGCATGCGGGCATGCTGCGGCACAA
AGACACATGGATGTGGGTGGCACAGGTGGTTACGGCGCTGATCATTCTGGTCATGGCCAGCATCCATATGTACGAAGTGC
TCACCGACCTGCCCATAACCGCCCAGAAAAGCGCGGCCCGCATCCAGCACGGCGGCTGGCTTTCTTTTTATCTCATTCTG
CTGCCCATGGCTGAAATCCACGTAGGCGTCGGATTTTACCGCATAGGGGTGAAATACGGTTTTATCACCCGTGAAAACCG
CAAATGGTATCAGCGCACCGAAAACGCCATGATGATCGGCTTCATTGCGGTGGGGCTGCTTACTCTTGTCCGCTTCATGT
TCCTTGACCTCATTTAA

Upstream 100 bases:

>100_bases
CCCGGCGGAGCGCACCGCCTGCGGTATCCGCAGTGCACGGGTGGCGGCCTGTTTCCGGCAGGCCTTTTCCCAGCAACGAA
CCTTTACCGAGGAGCAGCAC

Downstream 100 bases:

>100_bases
TTATTTCAGCCAGAGCAAGAGGTGTTCAATGCAAGTTATCTATACCGACGTCCTGTGCATAGGCGCCGGCCTTGCCGGTG
AGCGGGTCGCCGTTGAAGCG

Product: fumarate reductase, cytochrome b subunit

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNSSTVTLHVPQRSKLAGRLDFLQMLSGVLLILFLWAHLLLVSSVILSPRLMNAIAWFFEATFMAQIGGPVIFALMLFHF
ILAGRKMPFRTTEQRAFLRHAGMLRHKDTWMWVAQVVTALIILVMASIHMYEVLTDLPITAQKSAARIQHGGWLSFYLIL
LPMAEIHVGVGFYRIGVKYGFITRENRKWYQRTENAMMIGFIAVGLLTLVRFMFLDLI

Sequences:

>Translated_218_residues
MNSSTVTLHVPQRSKLAGRLDFLQMLSGVLLILFLWAHLLLVSSVILSPRLMNAIAWFFEATFMAQIGGPVIFALMLFHF
ILAGRKMPFRTTEQRAFLRHAGMLRHKDTWMWVAQVVTALIILVMASIHMYEVLTDLPITAQKSAARIQHGGWLSFYLIL
LPMAEIHVGVGFYRIGVKYGFITRENRKWYQRTENAMMIGFIAVGLLTLVRFMFLDLI
>Mature_218_residues
MNSSTVTLHVPQRSKLAGRLDFLQMLSGVLLILFLWAHLLLVSSVILSPRLMNAIAWFFEATFMAQIGGPVIFALMLFHF
ILAGRKMPFRTTEQRAFLRHAGMLRHKDTWMWVAQVVTALIILVMASIHMYEVLTDLPITAQKSAARIQHGGWLSFYLIL
LPMAEIHVGVGFYRIGVKYGFITRENRKWYQRTENAMMIGFIAVGLLTLVRFMFLDLI

Specific function: Di-heme cytochrome of the fumarate reductase complex [H]

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004224
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 24973; Mature: 24973

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSTVTLHVPQRSKLAGRLDFLQMLSGVLLILFLWAHLLLVSSVILSPRLMNAIAWFFE
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATFMAQIGGPVIFALMLFHFILAGRKMPFRTTEQRAFLRHAGMLRHKDTWMWVAQVVTAL
HHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
IILVMASIHMYEVLTDLPITAQKSAARIQHGGWLSFYLILLPMAEIHVGVGFYRIGVKYG
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHEEHHEEE
FITRENRKWYQRTENAMMIGFIAVGLLTLVRFMFLDLI
EEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSSTVTLHVPQRSKLAGRLDFLQMLSGVLLILFLWAHLLLVSSVILSPRLMNAIAWFFE
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATFMAQIGGPVIFALMLFHFILAGRKMPFRTTEQRAFLRHAGMLRHKDTWMWVAQVVTAL
HHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
IILVMASIHMYEVLTDLPITAQKSAARIQHGGWLSFYLILLPMAEIHVGVGFYRIGVKYG
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHEEHHEEE
FITRENRKWYQRTENAMMIGFIAVGLLTLVRFMFLDLI
EEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]