| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is maeB [H]
Identifier: 78356300
GI number: 78356300
Start: 1267517
End: 1268833
Strand: Reverse
Name: maeB [H]
Synonym: Dde_1253
Alternate gene names: 78356300
Gene position: 1268833-1267517 (Counterclockwise)
Preceding gene: 78356301
Following gene: 78356299
Centisome position: 34.01
GC content: 56.8
Gene sequence:
>1317_bases ATGGCTCTGTTCACCAAGGAAGAAGCGCTGCACTATCACGAAGCCCCCCGCCACGGTAAGGTGGAGGTCATTCCCGTAAA ACCGTGCCGCAACCAGAAAGACCTTTCCATGGCGTATTCGCCCGGCGTTGCCGAAGCATGCAAAGCCATCAAGGAAGACC CTTCCAAGGCCGAGATATACACCGGCAGAAGCAATCTGGTGGCTGTGGTATCCGACGGCACCGCAGTGCTCGGGCTGGGC AATATCGGCCCGCTGGCCGGAAAACCGGTCATGGAAGGCAAAGGCGTTCTTTTCAAAACATTTGCAGACATTGATGTTTT TGACATCAACCTCGACGTTTCCAGTGCCGACCAGCTCATCGGCGTGGTCAAGGCGCTGGAACCCACCTTCGGCGGTATCA ACCTTGAAGATATCAAGGCGCCGGAATGCTTCTACATTGAAGATACGCTGAAAAAAGAAATGAACATACCGGTGTTTCAC GACGACCAGCACGGCACGGCTGTCATTTCCGGCGCCGGCCTGCTCAACGCGCTGGAAATAACCAACCGCAAAGCCGAAAA CATGAAGGTCGTCGTGGTGGGAGCCGGGGCTGCAGGCATCGCATGCGCCAAGTTCTACGTTTCGCTGGGCGTGGATCCCG CCAACATATACATGTTCGACTCACGCGGACTTATCCACAAGGGCCGTAAAGATCTGAACGAATACAAAGCTCTTTTCGCC CAGCCGTCCGATGCGGGCACTCTGGCAGAGGTGATGAAGGGCGCAGACATGTTCCTGGGGCTTTCCACCAAAAACCTTGT CTCGCAGGACATGGTGCGCTCCATGGCCAAAGACCCCGTTCTGTTTGCCATGGCCAACCCCGACCCCGAAATCACCTATC CCGATGCCAAGCAGGCAAGCCCCAACTGCATCATGGGTACAGGGCGCTCCGACTTCCCCAATCAGGTCAACAACGTATCC GGGTTCCCCTACATCTTCCGCGGGGCGCTGGATGTGGGTGCCACCGAAATCAACGAAGAAATGAAAGTGGCGGCAGCCCG TTCGCTGGCAGCGCTGGCCAAAGAACCCGTACCTTCGGAGATATGCGACATGTACGGCGTGAAGGAACTGACCTTCGGCG TCGACTATGTCATCCCCAAGCCTCTCGATCCCAGAGTTCTTGTCTGGGAAACCCCCGCTGTTGCCAAGGCAGCCATGGAC TCCGGCGTGGCCAGAAAGCCCATCGCCGACATGGAAGCCTACAAAAAGCAGCTCACCACCCGCTTCGATGAGTCGCGCAA GCGTATTGCGCGTGTTGTCGACAGCTACGGTCTTTAA
Upstream 100 bases:
>100_bases CCGTCAAAGAGTTTCCGCTGCTGGTCATCAACGACTGTCACGGCGGCGAACTGTATGTAAAACCCGCTCTGGACCGCTAG CAAGCAGGAGGAGTTCTCTC
Downstream 100 bases:
>100_bases GCTCCCGGTTTAGGCTGTCCGCCATATCTGCCGACATTGCGGACACTTAAACGGCCATCCCGCGCCTGCCGCGGGATGGC CCTCTCCCCTTGCGCGCTTT
Product: malate dehydrogenase
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MALFTKEEALHYHEAPRHGKVEVIPVKPCRNQKDLSMAYSPGVAEACKAIKEDPSKAEIYTGRSNLVAVVSDGTAVLGLG NIGPLAGKPVMEGKGVLFKTFADIDVFDINLDVSSADQLIGVVKALEPTFGGINLEDIKAPECFYIEDTLKKEMNIPVFH DDQHGTAVISGAGLLNALEITNRKAENMKVVVVGAGAAGIACAKFYVSLGVDPANIYMFDSRGLIHKGRKDLNEYKALFA QPSDAGTLAEVMKGADMFLGLSTKNLVSQDMVRSMAKDPVLFAMANPDPEITYPDAKQASPNCIMGTGRSDFPNQVNNVS GFPYIFRGALDVGATEINEEMKVAAARSLAALAKEPVPSEICDMYGVKELTFGVDYVIPKPLDPRVLVWETPAVAKAAMD SGVARKPIADMEAYKKQLTTRFDESRKRIARVVDSYGL
Sequences:
>Translated_438_residues MALFTKEEALHYHEAPRHGKVEVIPVKPCRNQKDLSMAYSPGVAEACKAIKEDPSKAEIYTGRSNLVAVVSDGTAVLGLG NIGPLAGKPVMEGKGVLFKTFADIDVFDINLDVSSADQLIGVVKALEPTFGGINLEDIKAPECFYIEDTLKKEMNIPVFH DDQHGTAVISGAGLLNALEITNRKAENMKVVVVGAGAAGIACAKFYVSLGVDPANIYMFDSRGLIHKGRKDLNEYKALFA QPSDAGTLAEVMKGADMFLGLSTKNLVSQDMVRSMAKDPVLFAMANPDPEITYPDAKQASPNCIMGTGRSDFPNQVNNVS GFPYIFRGALDVGATEINEEMKVAAARSLAALAKEPVPSEICDMYGVKELTFGVDYVIPKPLDPRVLVWETPAVAKAAMD SGVARKPIADMEAYKKQLTTRFDESRKRIARVVDSYGL >Mature_437_residues ALFTKEEALHYHEAPRHGKVEVIPVKPCRNQKDLSMAYSPGVAEACKAIKEDPSKAEIYTGRSNLVAVVSDGTAVLGLGN IGPLAGKPVMEGKGVLFKTFADIDVFDINLDVSSADQLIGVVKALEPTFGGINLEDIKAPECFYIEDTLKKEMNIPVFHD DQHGTAVISGAGLLNALEITNRKAENMKVVVVGAGAAGIACAKFYVSLGVDPANIYMFDSRGLIHKGRKDLNEYKALFAQ PSDAGTLAEVMKGADMFLGLSTKNLVSQDMVRSMAKDPVLFAMANPDPEITYPDAKQASPNCIMGTGRSDFPNQVNNVSG FPYIFRGALDVGATEINEEMKVAAARSLAALAKEPVPSEICDMYGVKELTFGVDYVIPKPLDPRVLVWETPAVAKAAMDS GVARKPIADMEAYKKQLTTRFDESRKRIARVVDSYGL
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI62420882, Length=349, Percent_Identity=28.3667621776504, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI62420880, Length=349, Percent_Identity=28.3667621776504, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI239049447, Length=349, Percent_Identity=28.3667621776504, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI4505143, Length=341, Percent_Identity=25.2199413489736, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI4505145, Length=345, Percent_Identity=25.5072463768116, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1788806, Length=441, Percent_Identity=56.6893424036281, Blast_Score=491, Evalue=1e-140, Organism=Escherichia coli, GI87081919, Length=486, Percent_Identity=22.4279835390947, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17537199, Length=407, Percent_Identity=27.7641277641278, Blast_Score=81, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6322823, Length=353, Percent_Identity=28.0453257790368, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI78707242, Length=346, Percent_Identity=27.4566473988439, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI78707238, Length=346, Percent_Identity=27.4566473988439, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI78707240, Length=346, Percent_Identity=27.4566473988439, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI24646388, Length=401, Percent_Identity=27.6807980049875, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI281362674, Length=410, Percent_Identity=27.0731707317073, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI281362672, Length=410, Percent_Identity=27.0731707317073, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI21356279, Length=410, Percent_Identity=27.0731707317073, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI24646386, Length=401, Percent_Identity=27.6807980049875, Blast_Score=86, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 47255; Mature: 47124
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFTKEEALHYHEAPRHGKVEVIPVKPCRNQKDLSMAYSPGVAEACKAIKEDPSKAEIY CCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEE TGRSNLVAVVSDGTAVLGLGNIGPLAGKPVMEGKGVLFKTFADIDVFDINLDVSSADQLI ECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCHHHHH GVVKALEPTFGGINLEDIKAPECFYIEDTLKKEMNIPVFHDDQHGTAVISGAGLLNALEI HHHHHHCCCCCCCCHHHCCCCCEEEEHHHHHHHCCCCEEECCCCCEEEEECCCHHHHHHH TNRKAENMKVVVVGAGAAGIACAKFYVSLGVDPANIYMFDSRGLIHKGRKDLNEYKALFA HCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHC QPSDAGTLAEVMKGADMFLGLSTKNLVSQDMVRSMAKDPVLFAMANPDPEITYPDAKQAS CCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC PNCIMGTGRSDFPNQVNNVSGFPYIFRGALDVGATEINEEMKVAAARSLAALAKEPVPSE CCEEEECCCCCCCCHHHCCCCCCCEEECHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHH ICDMYGVKELTFGVDYVIPKPLDPRVLVWETPAVAKAAMDSGVARKPIADMEAYKKQLTT HHHHCCCHHHHCCEEEECCCCCCCCEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH RFDESRKRIARVVDSYGL HHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALFTKEEALHYHEAPRHGKVEVIPVKPCRNQKDLSMAYSPGVAEACKAIKEDPSKAEIY CCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEE TGRSNLVAVVSDGTAVLGLGNIGPLAGKPVMEGKGVLFKTFADIDVFDINLDVSSADQLI ECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCHHHHH GVVKALEPTFGGINLEDIKAPECFYIEDTLKKEMNIPVFHDDQHGTAVISGAGLLNALEI HHHHHHCCCCCCCCHHHCCCCCEEEEHHHHHHHCCCCEEECCCCCEEEEECCCHHHHHHH TNRKAENMKVVVVGAGAAGIACAKFYVSLGVDPANIYMFDSRGLIHKGRKDLNEYKALFA HCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHC QPSDAGTLAEVMKGADMFLGLSTKNLVSQDMVRSMAKDPVLFAMANPDPEITYPDAKQAS CCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC PNCIMGTGRSDFPNQVNNVSGFPYIFRGALDVGATEINEEMKVAAARSLAALAKEPVPSE CCEEEECCCCCCCCHHHCCCCCCCEEECHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHH ICDMYGVKELTFGVDYVIPKPLDPRVLVWETPAVAKAAMDSGVARKPIADMEAYKKQLTT HHHHCCCHHHHCCEEEECCCCCCCCEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH RFDESRKRIARVVDSYGL HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]