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The map label for this gene is yfbS [C]

Identifier: 78356299

GI number: 78356299

Start: 1266034

End: 1267380

Strand: Reverse

Name: yfbS [C]

Synonym: Dde_1252

Alternate gene names: 78356299

Gene position: 1267380-1266034 (Counterclockwise)

Preceding gene: 78356300

Following gene: 78356298

Centisome position: 33.98

GC content: 56.79

Gene sequence:

>1347_bases
ATGATCAAACGCGTGCTGCCCGTACTCGGCCTTACGGCTCTTATTCTGGCTGTCACCGCCGGTGCCGCCTTCGCGGCCAC
GGCCGGCGGCCACGACCTGACCAAGGCATATCTCACTCTGGCAATTCTGGGGGTTGCCGCAGTACTTTTCTTTACCGAGG
TAATTCCGCTGCCCATAACGGCCATGCTGGTTCCGGTCAGCCTGTCCATTTTTGACATTGTTCCGGCCAAAGCGGCCTTT
GCCAACTTCGGGAACAGCTGGGTCGTCATATTCATGGCCATGTTCATTGTTGGTGAATCCACGTTCATAACCGGATTTGC
CGATAAGGTCGGCAAAATGACCGTACGGCTTTCCAAAGGCAGCGAAGTGCGCCTGCTCATTTTCTCCATGGTTTCCGTGG
GAGTGCTTTCCGCCTTTCTCAGCAACACGGGAACCACCGTCGTGGCCATACCCATGATCATGGGCATGTGCGCAAGCGCG
GGTATACGCCCCGGCAAAATACTTATGCCTGTGGCCTTTGCCGCCAGTCTGGGCGGCACCATGACGCTGGTGGGCACACC
GCCCAACGGACTCATTAACTCCGTACTGGAAAAAATGGGCCCCGCCGGCATCCACCCCTTCGGCTTTTTCGAATTCGCCA
AGTTCGGCATCATCCTGTTCATCGCCGGCATTGCCTACTATGCGCTTATCGGACACAAACTGCTGCCCGATTCCGACGCC
AGCTGCCACATGGACGATGAAGAGATAGAGCGCCCCAAACGGCCCGAAAAAATGATCTGGTCGCTGCTTATCTTTGCCTT
TGTGGTGGTGGCCATGGCCACCAAGTTTCTGCCGCTGGTCACTGCAGCCGTGCTGGGTGCCTGTCTGGTGGTCATAACCG
GCTGCATGACCATGCGAGAAGCCTTCCGCAGTGTGGACTGGGTGACCATATTCCTTTTCGCGGGCATGCTTTCCATGAGT
ACCGCCATGGACAAATCAGGCGCTGCGGCACTTATAGCCGAAAGCGTTGTGCAGCATGTGAGCAACCCTTACGGCATCAT
GTTCGTCACGTGTCTGCTTACCGTCTGCATAACAAACTTCATGTCCAACACCGCTACTGCAGCCCTCATGGCTCCGCTGG
CCATTCCCATAGCCATGCAGAGCGGCATCAGCCCCCTGCCGCTGGCCATGGGCATAGCCATGTCGGCTTCGGCATGCTTT
CTCACCCCCGTGGCAACACCGCCCAACACCATCGTACTGGGGCCGGGCAAATATTCGTTTCTCGACTATGTAAAGGCAGG
ATGGCCGCTGCAGATTATCAGCCTGCTTCTCAGCGTGGCCATCATCCCTCTTATCTGGCCTTTCTAA

Upstream 100 bases:

>100_bases
TTGCGGACACTTAAACGGCCATCCCGCGCCTGCCGCGGGATGGCCCTCTCCCCTTGCGCGCTTTAAACCCCGGCGTACGC
CGGATCTGCAGGAGGACACA

Downstream 100 bases:

>100_bases
CAGACTGAAGACAGGGCGGAAAAAACCATGAGCAACATGATACTGAAAAAAGAGCAGCTCATTCCCGGCCAGACCAGCAA
ACTGGTCATAGACGCGCCGC

Product: cation transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MIKRVLPVLGLTALILAVTAGAAFAATAGGHDLTKAYLTLAILGVAAVLFFTEVIPLPITAMLVPVSLSIFDIVPAKAAF
ANFGNSWVVIFMAMFIVGESTFITGFADKVGKMTVRLSKGSEVRLLIFSMVSVGVLSAFLSNTGTTVVAIPMIMGMCASA
GIRPGKILMPVAFAASLGGTMTLVGTPPNGLINSVLEKMGPAGIHPFGFFEFAKFGIILFIAGIAYYALIGHKLLPDSDA
SCHMDDEEIERPKRPEKMIWSLLIFAFVVVAMATKFLPLVTAAVLGACLVVITGCMTMREAFRSVDWVTIFLFAGMLSMS
TAMDKSGAAALIAESVVQHVSNPYGIMFVTCLLTVCITNFMSNTATAALMAPLAIPIAMQSGISPLPLAMGIAMSASACF
LTPVATPPNTIVLGPGKYSFLDYVKAGWPLQIISLLLSVAIIPLIWPF

Sequences:

>Translated_448_residues
MIKRVLPVLGLTALILAVTAGAAFAATAGGHDLTKAYLTLAILGVAAVLFFTEVIPLPITAMLVPVSLSIFDIVPAKAAF
ANFGNSWVVIFMAMFIVGESTFITGFADKVGKMTVRLSKGSEVRLLIFSMVSVGVLSAFLSNTGTTVVAIPMIMGMCASA
GIRPGKILMPVAFAASLGGTMTLVGTPPNGLINSVLEKMGPAGIHPFGFFEFAKFGIILFIAGIAYYALIGHKLLPDSDA
SCHMDDEEIERPKRPEKMIWSLLIFAFVVVAMATKFLPLVTAAVLGACLVVITGCMTMREAFRSVDWVTIFLFAGMLSMS
TAMDKSGAAALIAESVVQHVSNPYGIMFVTCLLTVCITNFMSNTATAALMAPLAIPIAMQSGISPLPLAMGIAMSASACF
LTPVATPPNTIVLGPGKYSFLDYVKAGWPLQIISLLLSVAIIPLIWPF
>Mature_448_residues
MIKRVLPVLGLTALILAVTAGAAFAATAGGHDLTKAYLTLAILGVAAVLFFTEVIPLPITAMLVPVSLSIFDIVPAKAAF
ANFGNSWVVIFMAMFIVGESTFITGFADKVGKMTVRLSKGSEVRLLIFSMVSVGVLSAFLSNTGTTVVAIPMIMGMCASA
GIRPGKILMPVAFAASLGGTMTLVGTPPNGLINSVLEKMGPAGIHPFGFFEFAKFGIILFIAGIAYYALIGHKLLPDSDA
SCHMDDEEIERPKRPEKMIWSLLIFAFVVVAMATKFLPLVTAAVLGACLVVITGCMTMREAFRSVDWVTIFLFAGMLSMS
TAMDKSGAAALIAESVVQHVSNPYGIMFVTCLLTVCITNFMSNTATAALMAPLAIPIAMQSGISPLPLAMGIAMSASACF
LTPVATPPNTIVLGPGKYSFLDYVKAGWPLQIISLLLSVAIIPLIWPF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

Organism=Homo sapiens, GI31377715, Length=516, Percent_Identity=22.2868217054264, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI58761541, Length=516, Percent_Identity=22.2868217054264, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI301069349, Length=481, Percent_Identity=23.2848232848233, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI301069353, Length=330, Percent_Identity=24.8484848484848, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1788629, Length=190, Percent_Identity=42.6315789473684, Blast_Score=120, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI71988385, Length=461, Percent_Identity=25.3796095444685, Blast_Score=85, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI32565804, Length=454, Percent_Identity=24.6696035242291, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI32564681, Length=479, Percent_Identity=21.9206680584551, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898 [H]

Pfam domain/function: PF00939 Na_sulph_symp [H]

EC number: NA

Molecular weight: Translated: 47178; Mature: 47178

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRVLPVLGLTALILAVTAGAAFAATAGGHDLTKAYLTLAILGVAAVLFFTEVIPLPIT
CCHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLVPVSLSIFDIVPAKAAFANFGNSWVVIFMAMFIVGESTFITGFADKVGKMTVRLSKG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHEEHHHHHHCCEEEEECCC
SEVRLLIFSMVSVGVLSAFLSNTGTTVVAIPMIMGMCASAGIRPGKILMPVAFAASLGGT
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
MTLVGTPPNGLINSVLEKMGPAGIHPFGFFEFAKFGIILFIAGIAYYALIGHKLLPDSDA
EEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SCHMDDEEIERPKRPEKMIWSLLIFAFVVVAMATKFLPLVTAAVLGACLVVITGCMTMRE
CCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFRSVDWVTIFLFAGMLSMSTAMDKSGAAALIAESVVQHVSNPYGIMFVTCLLTVCITNF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MSNTATAALMAPLAIPIAMQSGISPLPLAMGIAMSASACFLTPVATPPNTIVLGPGKYSF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCCEEEECCCCHHH
LDYVKAGWPLQIISLLLSVAIIPLIWPF
HHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKRVLPVLGLTALILAVTAGAAFAATAGGHDLTKAYLTLAILGVAAVLFFTEVIPLPIT
CCHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLVPVSLSIFDIVPAKAAFANFGNSWVVIFMAMFIVGESTFITGFADKVGKMTVRLSKG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHEEHHHHHHCCEEEEECCC
SEVRLLIFSMVSVGVLSAFLSNTGTTVVAIPMIMGMCASAGIRPGKILMPVAFAASLGGT
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
MTLVGTPPNGLINSVLEKMGPAGIHPFGFFEFAKFGIILFIAGIAYYALIGHKLLPDSDA
EEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SCHMDDEEIERPKRPEKMIWSLLIFAFVVVAMATKFLPLVTAAVLGACLVVITGCMTMRE
CCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFRSVDWVTIFLFAGMLSMSTAMDKSGAAALIAESVVQHVSNPYGIMFVTCLLTVCITNF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MSNTATAALMAPLAIPIAMQSGISPLPLAMGIAMSASACFLTPVATPPNTIVLGPGKYSF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCCEEEECCCCHHH
LDYVKAGWPLQIISLLLSVAIIPLIWPF
HHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]