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The map label for this gene is pyrK [H]

Identifier: 78356298

GI number: 78356298

Start: 1265158

End: 1266006

Strand: Reverse

Name: pyrK [H]

Synonym: Dde_1251

Alternate gene names: 78356298

Gene position: 1266006-1265158 (Counterclockwise)

Preceding gene: 78356299

Following gene: 78356297

Centisome position: 33.94

GC content: 58.89

Gene sequence:

>849_bases
ATGAGCAACATGATACTGAAAAAAGAGCAGCTCATTCCCGGCCAGACCAGCAAACTGGTCATAGACGCGCCGCATATTGC
CGCCAAAGCGGAACCGGGCAGCTTTATCATACTGCGCGTCTGTGAACACGGAGAGCGCATACCCCTGACCATAGCAGACA
CCGACCGCGAAAAAGGCACCATCACCATCGTGTATCTGGTGCTGGGCAAAAGCACTGCCCTGCTGGAAGAACTGAATGAA
GGCGACAGCATTCTTGACCTGTGCGGGCCGCTGGGGCGGCCCACACACATCTCTTCCGGAGGCACCGTGATCTGCGTGGG
CGGCGGCACCGGTATTGCCGCCATGCATCACATAGCAAAAGGCCATCACAACGCGGGCAACCATGTGGTGGCCATCATCG
GGGCGCGCAACAAGGAACTGCTGCTGTTTGAAAACGAACTCAAAGCCTTTGCGCCGGAGGTGCTCGTCTCGACGGATGAC
GGCAGCTACGGGCACAAAGGGCTGGTCACCGACCTGCTGCGCCGCCGGTTAGAGCAGGACAATAACGTGATAGAGGTGGT
GGCCGTGGGCCCCGTTCCCATGATGGAAGCCGTGGCGGCAACCACCAGACCCTTCGGCGTAAAGACTACCGTCAGCCTGA
ACTCCATAATGGTGGACGGCATAGGCATGTGCGGCGCGTGCAGGGTGACCGTCGGCAACGAAACCCGCTTTGCCTGCGTG
GACGGGCCGGAATTTGACGGCCATCAGGTGGACTTTGCCGAACTGCGGCAACGCCTGAACGCTTTCCGTCCGCTTGAGCG
CGAATCCTATGACCATCACTGCAGGTGCAAATGCCATGAAAGCAAGTAA

Upstream 100 bases:

>100_bases
GGCAGGATGGCCGCTGCAGATTATCAGCCTGCTTCTCAGCGTGGCCATCATCCCTCTTATCTGGCCTTTCTAACAGACTG
AAGACAGGGCGGAAAAAACC

Downstream 100 bases:

>100_bases
AAAGCCCGTCAGACCCAGAGTGCCCATGCCCGTGCAGCCGCCCGAAGAGCGGATACGCAATTTTGACGAAGTAGCAACGG
GTTACACGCTGGAAATGGCC

Product: ferredoxin-NADP(+) reductase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSNMILKKEQLIPGQTSKLVIDAPHIAAKAEPGSFIILRVCEHGERIPLTIADTDREKGTITIVYLVLGKSTALLEELNE
GDSILDLCGPLGRPTHISSGGTVICVGGGTGIAAMHHIAKGHHNAGNHVVAIIGARNKELLLFENELKAFAPEVLVSTDD
GSYGHKGLVTDLLRRRLEQDNNVIEVVAVGPVPMMEAVAATTRPFGVKTTVSLNSIMVDGIGMCGACRVTVGNETRFACV
DGPEFDGHQVDFAELRQRLNAFRPLERESYDHHCRCKCHESK

Sequences:

>Translated_282_residues
MSNMILKKEQLIPGQTSKLVIDAPHIAAKAEPGSFIILRVCEHGERIPLTIADTDREKGTITIVYLVLGKSTALLEELNE
GDSILDLCGPLGRPTHISSGGTVICVGGGTGIAAMHHIAKGHHNAGNHVVAIIGARNKELLLFENELKAFAPEVLVSTDD
GSYGHKGLVTDLLRRRLEQDNNVIEVVAVGPVPMMEAVAATTRPFGVKTTVSLNSIMVDGIGMCGACRVTVGNETRFACV
DGPEFDGHQVDFAELRQRLNAFRPLERESYDHHCRCKCHESK
>Mature_281_residues
SNMILKKEQLIPGQTSKLVIDAPHIAAKAEPGSFIILRVCEHGERIPLTIADTDREKGTITIVYLVLGKSTALLEELNEG
DSILDLCGPLGRPTHISSGGTVICVGGGTGIAAMHHIAKGHHNAGNHVVAIIGARNKELLLFENELKAFAPEVLVSTDDG
SYGHKGLVTDLLRRRLEQDNNVIEVVAVGPVPMMEAVAATTRPFGVKTTVSLNSIMVDGIGMCGACRVTVGNETRFACVD
GPEFDGHQVDFAELRQRLNAFRPLERESYDHHCRCKCHESK

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 30460; Mature: 30329

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNMILKKEQLIPGQTSKLVIDAPHIAAKAEPGSFIILRVCEHGERIPLTIADTDREKGT
CCCCEECHHHCCCCCCCEEEEECCCEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCE
ITIVYLVLGKSTALLEELNEGDSILDLCGPLGRPTHISSGGTVICVGGGTGIAAMHHIAK
EEEEEEEECCCHHHHHHHCCCCCHHHHHCCCCCCCEECCCCEEEEEECCCCHHHHHHHHC
GHHNAGNHVVAIIGARNKELLLFENELKAFAPEVLVSTDDGSYGHKGLVTDLLRRRLEQD
CCCCCCCEEEEEEECCCCEEEEEECCHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC
NNVIEVVAVGPVPMMEAVAATTRPFGVKTTVSLNSIMVDGIGMCGACRVTVGNETRFACV
CCEEEEEEECCCHHHHHHHHCCCCCCEEEEEEECEEEECCCCCCCEEEEEECCCEEEEEE
DGPEFDGHQVDFAELRQRLNAFRPLERESYDHHCRCKCHESK
CCCCCCCCEECHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure 
SNMILKKEQLIPGQTSKLVIDAPHIAAKAEPGSFIILRVCEHGERIPLTIADTDREKGT
CCCEECHHHCCCCCCCEEEEECCCEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCE
ITIVYLVLGKSTALLEELNEGDSILDLCGPLGRPTHISSGGTVICVGGGTGIAAMHHIAK
EEEEEEEECCCHHHHHHHCCCCCHHHHHCCCCCCCEECCCCEEEEEECCCCHHHHHHHHC
GHHNAGNHVVAIIGARNKELLLFENELKAFAPEVLVSTDDGSYGHKGLVTDLLRRRLEQD
CCCCCCCEEEEEEECCCCEEEEEECCHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCC
NNVIEVVAVGPVPMMEAVAATTRPFGVKTTVSLNSIMVDGIGMCGACRVTVGNETRFACV
CCEEEEEEECCCHHHHHHHHCCCCCCEEEEEEECEEEECCCCCCCEEEEEECCCEEEEEE
DGPEFDGHQVDFAELRQRLNAFRPLERESYDHHCRCKCHESK
CCCCCCCCEECHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]