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The map label for this gene is hdrC [H]

Identifier: 78356254

GI number: 78356254

Start: 1234348

End: 1234962

Strand: Direct

Name: hdrC [H]

Synonym: Dde_1207

Alternate gene names: 78356254

Gene position: 1234348-1234962 (Clockwise)

Preceding gene: 78356253

Following gene: 78356255

Centisome position: 33.09

GC content: 60.0

Gene sequence:

>615_bases
ATGGAAGTGATATCCTTACAGTCCCGGGATGCCGCGTTTGCCGCAGAGGTCGCCCGCCGCAGCGGGCAGAATCTGGCCAC
ATGTTACCAGTGCGGTAACTGTACGGCCGGATGTCCGTATACCTTTGTGTACGACATTCCTGTCAGCAGGATCATGCGTC
TGGTGCAAATGGGCAGAAGAGACGAAGTGTTGCGGTGCCGTTCGCTGTGGCTGTGCGCCAGCTGTCAGTCGTGCACCACA
CGTTGTCCCAATAACATTGATGTGGCCCGCGTGGTCGACGTGCTGCGCCATATGGCGCGAGAAGCAGGATACGCCACTGA
AGGCGCTGTCAAAAGCTTCGGCGATGCTTTTCTGGCATCGGTGGAGCGGCATGGCCGTGTCTACGAAATGGGTATGCTGG
TCAACTATGTGCTGAAGACCGGCCGTTTCTGGACCGATTATGATCTTGCTCCCACGGTGCTGCCCAAGGGCAAGATCGGG
TTCCGGCCGCATACCATTCAGGGTGCCGGTCATGTGGCGGCCATATTCCGCCGTTTCCGCGAGCGGCAGCAGGAAGACCG
GCAGGCTGTTTCCGCCGCCGGCCCTGCCGCTGAGAGCAAGGGAGGCAGCCGATGA

Upstream 100 bases:

>100_bases
CACGGCATTGTTCCGGCATATATATCTGCGTTTCACGGTCCGGCACCGCACACCGGTGCCGGCGTTTTCGTTCATATAAA
TGGATAGTCCAGGGAATATT

Downstream 100 bases:

>100_bases
GTCTTGCCACTGTAGCGTATTATCCGGGCTGTTCGGGCGGCGGCACGTCTGCCGAGTACGAAAAGTCGACTCAGGCCGTT
TTCCGCGCACTGGGCGTGCG

Product: heterodisulfide reductase subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MEVISLQSRDAAFAAEVARRSGQNLATCYQCGNCTAGCPYTFVYDIPVSRIMRLVQMGRRDEVLRCRSLWLCASCQSCTT
RCPNNIDVARVVDVLRHMAREAGYATEGAVKSFGDAFLASVERHGRVYEMGMLVNYVLKTGRFWTDYDLAPTVLPKGKIG
FRPHTIQGAGHVAAIFRRFRERQQEDRQAVSAAGPAAESKGGSR

Sequences:

>Translated_204_residues
MEVISLQSRDAAFAAEVARRSGQNLATCYQCGNCTAGCPYTFVYDIPVSRIMRLVQMGRRDEVLRCRSLWLCASCQSCTT
RCPNNIDVARVVDVLRHMAREAGYATEGAVKSFGDAFLASVERHGRVYEMGMLVNYVLKTGRFWTDYDLAPTVLPKGKIG
FRPHTIQGAGHVAAIFRRFRERQQEDRQAVSAAGPAAESKGGSR
>Mature_204_residues
MEVISLQSRDAAFAAEVARRSGQNLATCYQCGNCTAGCPYTFVYDIPVSRIMRLVQMGRRDEVLRCRSLWLCASCQSCTT
RCPNNIDVARVVDVLRHMAREAGYATEGAVKSFGDAFLASVERHGRVYEMGMLVNYVLKTGRFWTDYDLAPTVLPKGKIG
FRPHTIQGAGHVAAIFRRFRERQQEDRQAVSAAGPAAESKGGSR

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrC may carry electrons from hydrogenase to hdrA [H]

COG id: COG1150

COG function: function code C; Heterodisulfide reductase, subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017680
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: NA

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 22604; Mature: 22604

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVISLQSRDAAFAAEVARRSGQNLATCYQCGNCTAGCPYTFVYDIPVSRIMRLVQMGRR
CCEECCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHCCCC
DEVLRCRSLWLCASCQSCTTRCPNNIDVARVVDVLRHMAREAGYATEGAVKSFGDAFLAS
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VERHGRVYEMGMLVNYVLKTGRFWTDYDLAPTVLPKGKIGFRPHTIQGAGHVAAIFRRFR
HHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ERQQEDRQAVSAAGPAAESKGGSR
HHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MEVISLQSRDAAFAAEVARRSGQNLATCYQCGNCTAGCPYTFVYDIPVSRIMRLVQMGRR
CCEECCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHCCCC
DEVLRCRSLWLCASCQSCTTRCPNNIDVARVVDVLRHMAREAGYATEGAVKSFGDAFLAS
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VERHGRVYEMGMLVNYVLKTGRFWTDYDLAPTVLPKGKIGFRPHTIQGAGHVAAIFRRFR
HHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ERQQEDRQAVSAAGPAAESKGGSR
HHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]