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The map label for this gene is hdrB [H]

Identifier: 78356255

GI number: 78356255

Start: 1234959

End: 1235858

Strand: Direct

Name: hdrB [H]

Synonym: Dde_1208

Alternate gene names: 78356255

Gene position: 1234959-1235858 (Clockwise)

Preceding gene: 78356254

Following gene: 78356256

Centisome position: 33.11

GC content: 62.67

Gene sequence:

>900_bases
ATGAGTCTTGCCACTGTAGCGTATTATCCGGGCTGTTCGGGCGGCGGCACGTCTGCCGAGTACGAAAAGTCGACTCAGGC
CGTTTTCCGCGCACTGGGCGTGCGGCTGGAAGAACTGCCTGACTGGAGCTGCTGCGGTTCCACACCCGCACACACGGTCA
ACCATGTGCTTTCGGCAGCATTGTCGGCGCGCAATCTGGCCATTGCCGCCACGGCGGGCCACAGCGTGGTGACCACCCCC
TGTCCCAGCTGTCTTTCCAACCTGCGCACTGCTGCGCATAAAATGGAAGATGCGGAATTCCGCAGTCAGGTTTCGGCATT
GCTGCATGACGGTGCCGCTGATGCCGATGTTGAAACGGGAGCGGATGTCGACGTGCGTTCGACCCTGCAGATACTGGCGG
AAGAAGTGGGTGCGCAGGCTGTGCAGGAAAAGGTGCGCAAGCCCCTGAGCGGCCTGAAGGTGGCCTGCTATTACGGCTGC
ATTATGAACCGGCCCCCCGGTCTGATGCAGTTTGACGACCCCGAACACCCCATGGCCATGGACAGGCTGATGGAAGCCTG
CGGGGCCGAGGTGGTGCCTTTTCCGCTGAAGGTTGAATGCTGCGGAGCGGCATTCGGCATGCCGCGCCGCGATATTGTTT
CCGAACTTTCGGGGCGCCTGCTGGACGCCGCGGCGGACTGCGGTGCCGATGCCGTGGTGGCTGCCTGTCCTCTCTGCCAG
ATGAACCTTGACATGCGTCAGGGACAGGTGAATGCGGCCCGCGGTTCGCGGCACGTACTGCCTGTGTTTTATTTTACCCA
GCTGATGGGGCTTTCCTTCGGTCTTGCACCGGCGGACGTGGGCCTTGCCAAGCTGGTTGTGGACCCCGGCCCCTGCCTCC
GCGCGGCAGGCGTGCTCTAA

Upstream 100 bases:

>100_bases
ATGTGGCGGCCATATTCCGCCGTTTCCGCGAGCGGCAGCAGGAAGACCGGCAGGCTGTTTCCGCCGCCGGCCCTGCCGCT
GAGAGCAAGGGAGGCAGCCG

Downstream 100 bases:

>100_bases
CGCCAAGGAGATGAAACCATGCGCATAGGCGTTTTCGTCTGCCACTGCGGGAGCAACATCGCCGCCACCGTCGACTGTCC
TTCGGTTGCGGAGACGGCAC

Product: succinate dehydrogenase subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSLATVAYYPGCSGGGTSAEYEKSTQAVFRALGVRLEELPDWSCCGSTPAHTVNHVLSAALSARNLAIAATAGHSVVTTP
CPSCLSNLRTAAHKMEDAEFRSQVSALLHDGAADADVETGADVDVRSTLQILAEEVGAQAVQEKVRKPLSGLKVACYYGC
IMNRPPGLMQFDDPEHPMAMDRLMEACGAEVVPFPLKVECCGAAFGMPRRDIVSELSGRLLDAAADCGADAVVAACPLCQ
MNLDMRQGQVNAARGSRHVLPVFYFTQLMGLSFGLAPADVGLAKLVVDPGPCLRAAGVL

Sequences:

>Translated_299_residues
MSLATVAYYPGCSGGGTSAEYEKSTQAVFRALGVRLEELPDWSCCGSTPAHTVNHVLSAALSARNLAIAATAGHSVVTTP
CPSCLSNLRTAAHKMEDAEFRSQVSALLHDGAADADVETGADVDVRSTLQILAEEVGAQAVQEKVRKPLSGLKVACYYGC
IMNRPPGLMQFDDPEHPMAMDRLMEACGAEVVPFPLKVECCGAAFGMPRRDIVSELSGRLLDAAADCGADAVVAACPLCQ
MNLDMRQGQVNAARGSRHVLPVFYFTQLMGLSFGLAPADVGLAKLVVDPGPCLRAAGVL
>Mature_298_residues
SLATVAYYPGCSGGGTSAEYEKSTQAVFRALGVRLEELPDWSCCGSTPAHTVNHVLSAALSARNLAIAATAGHSVVTTPC
PSCLSNLRTAAHKMEDAEFRSQVSALLHDGAADADVETGADVDVRSTLQILAEEVGAQAVQEKVRKPLSGLKVACYYGCI
MNRPPGLMQFDDPEHPMAMDRLMEACGAEVVPFPLKVECCGAAFGMPRRDIVSELSGRLLDAAADCGADAVVAACPLCQM
NLDMRQGQVNAARGSRHVLPVFYFTQLMGLSFGLAPADVGLAKLVVDPGPCLRAAGVL

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 31369; Mature: 31238

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLATVAYYPGCSGGGTSAEYEKSTQAVFRALGVRLEELPDWSCCGSTPAHTVNHVLSAA
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHH
LSARNLAIAATAGHSVVTTPCPSCLSNLRTAAHKMEDAEFRSQVSALLHDGAADADVETG
HHHCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ADVDVRSTLQILAEEVGAQAVQEKVRKPLSGLKVACYYGCIMNRPPGLMQFDDPEHPMAM
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
DRLMEACGAEVVPFPLKVECCGAAFGMPRRDIVSELSGRLLDAAADCGADAVVAACPLCQ
HHHHHHCCCCCCCCCEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHH
MNLDMRQGQVNAARGSRHVLPVFYFTQLMGLSFGLAPADVGLAKLVVDPGPCLRAAGVL
CCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCHHHEEECCCHHHHHCCCC
>Mature Secondary Structure 
SLATVAYYPGCSGGGTSAEYEKSTQAVFRALGVRLEELPDWSCCGSTPAHTVNHVLSAA
CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHH
LSARNLAIAATAGHSVVTTPCPSCLSNLRTAAHKMEDAEFRSQVSALLHDGAADADVETG
HHHCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ADVDVRSTLQILAEEVGAQAVQEKVRKPLSGLKVACYYGCIMNRPPGLMQFDDPEHPMAM
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
DRLMEACGAEVVPFPLKVECCGAAFGMPRRDIVSELSGRLLDAAADCGADAVVAACPLCQ
HHHHHHCCCCCCCCCEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHH
MNLDMRQGQVNAARGSRHVLPVFYFTQLMGLSFGLAPADVGLAKLVVDPGPCLRAAGVL
CCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCHHHEEECCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]