| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356238
Identifier: 78356238
GI number: 78356238
Start: 1220168
End: 1220815
Strand: Direct
Name: 78356238
Synonym: Dde_1191
Alternate gene names: NA
Gene position: 1220168-1220815 (Clockwise)
Preceding gene: 78356237
Following gene: 78356239
Centisome position: 32.71
GC content: 61.73
Gene sequence:
>648_bases ATGAAATTGCGGACTGAATTGCGGCCGGGCTGCATATGCGTTGTCATGTTGCTGATGCTTACGGCGCTGCCGGCACAGGC GCATCGGGTGAACGTATTTGCTTATGCCGAGGGCGACCGGATAACTGTGGAGGCCGGATACAGCAAATCGCGGCCGGTTA TGGGCGGCACAGTGGTGGTGGCCGACAAAGCCGACGGGGACGAGTTTCTCCGCGGCGTGACGGATGATAATGGCATATTT GTCTTTACCGTGCCGGATGCTGCCAAAAAAGAGAAAGCCGATCTGCGCATCACCCTGCTTGCCGGAGAAGGGCATCAGGA CTCATGGATAGTGCAGGCCGGGGAATACGCTGCGGAGACAGCGCCGCGTGATGCCGCAGCTTCCGGAGTGACGTATTCCG GCCGGGGCGCGGCGGGCAGCCGGCAGGCCGGTGCTGCCGCCGGCGCGCAGGGCGGCCATGTGAGCGTTGATGAAGCGCTG CTGCGGCAGGTGGTGGAAGAAGTTGTGGAGCGCAAGATTGCTCCCGTGCGCACCATGCTGGTGGAGCAGCATGAATCAGG GCCGGGGTTTGCCGACATTCTGGGCGGTCTGGGATATTTTGCAGGGCTGTTCGGCATTGCCGCGTATCTTAAAAGCCGCA GGCGCTGA
Upstream 100 bases:
>100_bases CACCGCTCTTACTGTTTCGTTTCTGGCCCGCGCGCGGCCTGAAGTGCTGCATATGAATGCCGGAAAACAGCGTTGAGTGC ACGGATAGAAGGAGGTGCAG
Downstream 100 bases:
>100_bases CCGGACCATATATGTTTGATGAACCTTTCAGCCGCGGCACCAGCCTGTTGCATCGTCTTGATCCCCGCATAAAGCTGACC GCGGCTTTTGTGCTGTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MKLRTELRPGCICVVMLLMLTALPAQAHRVNVFAYAEGDRITVEAGYSKSRPVMGGTVVVADKADGDEFLRGVTDDNGIF VFTVPDAAKKEKADLRITLLAGEGHQDSWIVQAGEYAAETAPRDAAASGVTYSGRGAAGSRQAGAAAGAQGGHVSVDEAL LRQVVEEVVERKIAPVRTMLVEQHESGPGFADILGGLGYFAGLFGIAAYLKSRRR
Sequences:
>Translated_215_residues MKLRTELRPGCICVVMLLMLTALPAQAHRVNVFAYAEGDRITVEAGYSKSRPVMGGTVVVADKADGDEFLRGVTDDNGIF VFTVPDAAKKEKADLRITLLAGEGHQDSWIVQAGEYAAETAPRDAAASGVTYSGRGAAGSRQAGAAAGAQGGHVSVDEAL LRQVVEEVVERKIAPVRTMLVEQHESGPGFADILGGLGYFAGLFGIAAYLKSRRR >Mature_215_residues MKLRTELRPGCICVVMLLMLTALPAQAHRVNVFAYAEGDRITVEAGYSKSRPVMGGTVVVADKADGDEFLRGVTDDNGIF VFTVPDAAKKEKADLRITLLAGEGHQDSWIVQAGEYAAETAPRDAAASGVTYSGRGAAGSRQAGAAAGAQGGHVSVDEAL LRQVVEEVVERKIAPVRTMLVEQHESGPGFADILGGLGYFAGLFGIAAYLKSRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22705; Mature: 22705
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRTELRPGCICVVMLLMLTALPAQAHRVNVFAYAEGDRITVEAGYSKSRPVMGGTVVV CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEE ADKADGDEFLRGVTDDNGIFVFTVPDAAKKEKADLRITLLAGEGHQDSWIVQAGEYAAET EECCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEECCCHHHHC APRDAAASGVTYSGRGAAGSRQAGAAAGAQGGHVSVDEALLRQVVEEVVERKIAPVRTML CCCCHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VEQHESGPGFADILGGLGYFAGLFGIAAYLKSRRR HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLRTELRPGCICVVMLLMLTALPAQAHRVNVFAYAEGDRITVEAGYSKSRPVMGGTVVV CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEE ADKADGDEFLRGVTDDNGIFVFTVPDAAKKEKADLRITLLAGEGHQDSWIVQAGEYAAET EECCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEECCCHHHHC APRDAAASGVTYSGRGAAGSRQAGAAAGAQGGHVSVDEALLRQVVEEVVERKIAPVRTML CCCCHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VEQHESGPGFADILGGLGYFAGLFGIAAYLKSRRR HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA