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The map label for this gene is 78356237

Identifier: 78356237

GI number: 78356237

Start: 1219529

End: 1220143

Strand: Direct

Name: 78356237

Synonym: Dde_1190

Alternate gene names: NA

Gene position: 1219529-1220143 (Clockwise)

Preceding gene: 78356236

Following gene: 78356238

Centisome position: 32.69

GC content: 60.65

Gene sequence:

>615_bases
ATGCACATATCGGAAGGGGTACTTTCGGCACCGGTTTTGCTGTGCGGTGCCGCCGTGGCGGCGGCGGGCATCGCGGCGGG
ACTGCGCAGGATGGACTATGACCGCCTGATGACCGTGGCGCTGCTTTCGGCCGCTTTTTTTGTGGGATCGCTTATCCATA
TACCGGTGGGACCGGCCAGCGCACATCTTATTCTTAACGGGCTGCTGGGCGCAGTGCTCGGTTGGGCGGCCTTTCCGGCC
ATATTCACCGCACTGCTGCTGCAGGCCGTGCTTTTTCAGTACGGCGGGCTGACCATTCTGGGCGTGAACACGGCAACCAT
GGCTTCTGCCGCGGTGCTGTGCTTCTATCTTTTTTCTCCGCTTATGCGCAGGCAGGGGCGCTGGCGGCTGCTGGGCGGTT
TTTGCTGCGGGGCGTGCGGCGTGCTGTTTGCAGGGCTGTTCACAGCGGCAAGTCTTGCGTTTTCTGATGAAGGCTTCCGC
CATGCTGCCGGCATGATTCTGGTGGCGCATATTCCCGTCATGGTGGTGGAAGGCATCATCACCGCTCTTACTGTTTCGTT
TCTGGCCCGCGCGCGGCCTGAAGTGCTGCATATGAATGCCGGAAAACAGCGTTGA

Upstream 100 bases:

>100_bases
CACCTGACGAGTGCGGCGGCCGCACCTCCGGCCGCCGCACTTTTTTTACCGGACTGCGCAGAGGCGGAATGTCCGGTGCT
TCAGCAAAAGGACGAAAGGC

Downstream 100 bases:

>100_bases
GTGCACGGATAGAAGGAGGTGCAGATGAAATTGCGGACTGAATTGCGGCCGGGCTGCATATGCGTTGTCATGTTGCTGAT
GCTTACGGCGCTGCCGGCAC

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MHISEGVLSAPVLLCGAAVAAAGIAAGLRRMDYDRLMTVALLSAAFFVGSLIHIPVGPASAHLILNGLLGAVLGWAAFPA
IFTALLLQAVLFQYGGLTILGVNTATMASAAVLCFYLFSPLMRRQGRWRLLGGFCCGACGVLFAGLFTAASLAFSDEGFR
HAAGMILVAHIPVMVVEGIITALTVSFLARARPEVLHMNAGKQR

Sequences:

>Translated_204_residues
MHISEGVLSAPVLLCGAAVAAAGIAAGLRRMDYDRLMTVALLSAAFFVGSLIHIPVGPASAHLILNGLLGAVLGWAAFPA
IFTALLLQAVLFQYGGLTILGVNTATMASAAVLCFYLFSPLMRRQGRWRLLGGFCCGACGVLFAGLFTAASLAFSDEGFR
HAAGMILVAHIPVMVVEGIITALTVSFLARARPEVLHMNAGKQR
>Mature_204_residues
MHISEGVLSAPVLLCGAAVAAAGIAAGLRRMDYDRLMTVALLSAAFFVGSLIHIPVGPASAHLILNGLLGAVLGWAAFPA
IFTALLLQAVLFQYGGLTILGVNTATMASAAVLCFYLFSPLMRRQGRWRLLGGFCCGACGVLFAGLFTAASLAFSDEGFR
HAAGMILVAHIPVMVVEGIITALTVSFLARARPEVLHMNAGKQR

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 21285; Mature: 21285

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00277 STAPH_STREP_TOXIN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHISEGVLSAPVLLCGAAVAAAGIAAGLRRMDYDRLMTVALLSAAFFVGSLIHIPVGPAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AHLILNGLLGAVLGWAAFPAIFTALLLQAVLFQYGGLTILGVNTATMASAAVLCFYLFSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHH
LMRRQGRWRLLGGFCCGACGVLFAGLFTAASLAFSDEGFRHAAGMILVAHIPVMVVEGII
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
TALTVSFLARARPEVLHMNAGKQR
HHHHHHHHHHCCCCEEECCCCCCC
>Mature Secondary Structure
MHISEGVLSAPVLLCGAAVAAAGIAAGLRRMDYDRLMTVALLSAAFFVGSLIHIPVGPAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AHLILNGLLGAVLGWAAFPAIFTALLLQAVLFQYGGLTILGVNTATMASAAVLCFYLFSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHH
LMRRQGRWRLLGGFCCGACGVLFAGLFTAASLAFSDEGFRHAAGMILVAHIPVMVVEGII
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
TALTVSFLARARPEVLHMNAGKQR
HHHHHHHHHHCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]