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The map label for this gene is yraN [C]

Identifier: 78356140

GI number: 78356140

Start: 1123151

End: 1123759

Strand: Reverse

Name: yraN [C]

Synonym: Dde_1093

Alternate gene names: 78356140

Gene position: 1123759-1123151 (Counterclockwise)

Preceding gene: 78356141

Following gene: 78356139

Centisome position: 30.13

GC content: 65.19

Gene sequence:

>609_bases
ATGGTAGCCCGCCGCGCCGCAGGCAGCTGTCCCGCGCACATTGCCGCGGGCCGTCTGGGTGAAGAAGCGGCCTGCGCCTA
TCTTGCCGCATCGGGCATGCGCATTTTGGCCCGCAACTGGCGCGCCGGACATCTGGAACTGGATATCATCGCACAGGACA
ACGGCACCATTGTGTTCGCCGAAGTGAAAACCCGTGCCGCTCGGGGCCTGGAGTCGCCTCACGAAGCCCTTACTCCGGCC
AAACGCAGCAGGCTTGTCAGGGCTGCCGGTATGTGGCTGTCCAGCAACGATATGTGGGACCGCCCTTGCCGCTTTGACCT
TGTTTGTGTAACCACAGAAGCACGCGCACCTGAGCCGGAGCAGATGTCGCTGCAGGCGGCCCGTGCCGCAGGAACCGCTC
AGGCCCGCCGCGCCGCAGGTTCCGGACTGCCGGGCATACTGGGCAAAGCTGCATCGCGCCTGTTCGGCGCCGGTTCGCCG
CAGCGTTCCCACCGTGCGGGCGGTGCACCGGATTCTCCGGAACAACTTTTACGCGTGGAGCATATTCCCCATGCCTTCGA
CCTCTCCGAGTCTCTGGGTGGTGGCGACGCCGCTTGGCAACCTTGGTGA

Upstream 100 bases:

>100_bases
TCGAGGCTATCCGCAGGCTAGGTCCCTGCCGCATGCACCGCCTGTCTTTTGCCAAAGTGAAACCGGCGGCCGCCCCGCAT
GCCGCCGACCAGAACACGCT

Downstream 100 bases:

>100_bases
CTTTTCGCCCCGCGCACGCGAAGTGCTGGCAGCTGCCGACATGGTGCTGGCCGAAGACACCCGTAGAACGGCAGGACTGC
TGCGCAACGCCGGTATAGAA

Product: endonuclease-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MVARRAAGSCPAHIAAGRLGEEAACAYLAASGMRILARNWRAGHLELDIIAQDNGTIVFAEVKTRAARGLESPHEALTPA
KRSRLVRAAGMWLSSNDMWDRPCRFDLVCVTTEARAPEPEQMSLQAARAAGTAQARRAAGSGLPGILGKAASRLFGAGSP
QRSHRAGGAPDSPEQLLRVEHIPHAFDLSESLGGGDAAWQPW

Sequences:

>Translated_202_residues
MVARRAAGSCPAHIAAGRLGEEAACAYLAASGMRILARNWRAGHLELDIIAQDNGTIVFAEVKTRAARGLESPHEALTPA
KRSRLVRAAGMWLSSNDMWDRPCRFDLVCVTTEARAPEPEQMSLQAARAAGTAQARRAAGSGLPGILGKAASRLFGAGSP
QRSHRAGGAPDSPEQLLRVEHIPHAFDLSESLGGGDAAWQPW
>Mature_202_residues
MVARRAAGSCPAHIAAGRLGEEAACAYLAASGMRILARNWRAGHLELDIIAQDNGTIVFAEVKTRAARGLESPHEALTPA
KRSRLVRAAGMWLSSNDMWDRPCRFDLVCVTTEARAPEPEQMSLQAARAAGTAQARRAAGSGLPGILGKAASRLFGAGSP
QRSHRAGGAPDSPEQLLRVEHIPHAFDLSESLGGGDAAWQPW

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1093_DESDG (Q313K2)

Other databases:

- EMBL:   CP000112
- RefSeq:   YP_387589.1
- ProteinModelPortal:   Q313K2
- STRING:   Q313K2
- GeneID:   3755442
- GenomeReviews:   CP000112_GR
- KEGG:   dde:Dde_1093
- NMPDR:   fig|207559.3.peg.922
- eggNOG:   COG0792
- BioCyc:   DDES207559:DDE_1093-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 21393; Mature: 21393

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVARRAAGSCPAHIAAGRLGEEAACAYLAASGMRILARNWRAGHLELDIIAQDNGTIVFA
CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCEEEEE
EVKTRAARGLESPHEALTPAKRSRLVRAAGMWLSSNDMWDRPCRFDLVCVTTEARAPEPE
ECHHHHHHCCCCCHHHHCHHHHHHHHHHHCCEECCCCCCCCCCCEEEEEEEECCCCCCCH
QMSLQAARAAGTAQARRAAGSGLPGILGKAASRLFGAGSPQRSHRAGGAPDSPEQLLRVE
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
HIPHAFDLSESLGGGDAAWQPW
CCCCHHCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MVARRAAGSCPAHIAAGRLGEEAACAYLAASGMRILARNWRAGHLELDIIAQDNGTIVFA
CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCEEEEE
EVKTRAARGLESPHEALTPAKRSRLVRAAGMWLSSNDMWDRPCRFDLVCVTTEARAPEPE
ECHHHHHHCCCCCHHHHCHHHHHHHHHHHCCEECCCCCCCCCCCEEEEEEEECCCCCCCH
QMSLQAARAAGTAQARRAAGSGLPGILGKAASRLFGAGSPQRSHRAGGAPDSPEQLLRVE
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
HIPHAFDLSESLGGGDAAWQPW
CCCCHHCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA