| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is trpF2 [H]
Identifier: 78356101
GI number: 78356101
Start: 1081540
End: 1082343
Strand: Reverse
Name: trpF2 [H]
Synonym: Dde_1054
Alternate gene names: 78356101
Gene position: 1082343-1081540 (Counterclockwise)
Preceding gene: 78356102
Following gene: 78356099
Centisome position: 29.02
GC content: 63.18
Gene sequence:
>804_bases GTGACCACCGTAATCCTGCCGCGCAGGGGGCGCCCTTTTTGCGGCCTTGTTCAGGCGGCCGGAGTACATGATGCCCGGGA AGCTCTAGTCATTGCGCAAAGCGGCATACGCTGCATCGGACTGCCGCTGCGTCTACCCGTGCATACCGAAGACATCACCG AGCATGACGCCGCCGCGCTGTGCCGCATGCTGCAGACACTGCCCCCGTCCGCCGCAGGACCGGTCTGCCCTGTATGCATA ACATATCTGGACACGGCACAGGATATCCGCGACCTGTGCCGCATGCTGGGCACCGCCCACGTCCAGCTGCACGGCGGCAT ACCCGTGCACCAGCTGGCCGCGCTGCGCGCCATGATGCCCGGACTGTACATCATCAAAAGTCTGGTTGTCAGACAGACAG AGACCGGAAAGGACAATCTGGAAGAACTGACCGGTATCATCGACGCGACAGCGCAGCTGGTCGACGCCTACATAACCGAC ACCCATGATCCGGCAAGCGGCGCGGACGGCGCCACCGGTAAAACGCATGACTGGCGGACAAGCCGTGCGCTGGTGCGGCG TTCTCCGCTGCCTGTCATTCTGGCGGGCGGTCTGACACCGCAAAACGTCCGGCAGGCGGTGCTGACAGTGCGTCCCGCCG GTGTCGATGCCCATACCGGACTTGAAAACCCCGCAGGGCGCAAAGATCCCGCGCTGTGCCATGAATTTGCACGTCAGGCT GCCGCCGCGTTCAGACAGATATGCAACGGGGACACCGCGGGCAGCGAACGCTCAAGGCTTGAGAATCCGTCAGCTTTCCG GTAA
Upstream 100 bases:
>100_bases ACCATCAGGAAGACATCCAGCCGGAAACAACCCATGAACTGCACCTGAATGCCGGACGCATAACATACTGCGGACCGGTT TGCCCCGCAGGAGACACCCT
Downstream 100 bases:
>100_bases GGATAGGCAGGCACATAGTGAAATGAATCACAACAGGCGTTAACGAGGGTATCAGAATGGATTTTCTTTTTTTCTTTCTT GGTCTGGGCGCGGTTCTCAG
Product: phosphoribosylanthranilate isomerase
Products: NA
Alternate protein names: PRAI 2 [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTTVILPRRGRPFCGLVQAAGVHDAREALVIAQSGIRCIGLPLRLPVHTEDITEHDAAALCRMLQTLPPSAAGPVCPVCI TYLDTAQDIRDLCRMLGTAHVQLHGGIPVHQLAALRAMMPGLYIIKSLVVRQTETGKDNLEELTGIIDATAQLVDAYITD THDPASGADGATGKTHDWRTSRALVRRSPLPVILAGGLTPQNVRQAVLTVRPAGVDAHTGLENPAGRKDPALCHEFARQA AAAFRQICNGDTAGSERSRLENPSAFR
Sequences:
>Translated_267_residues MTTVILPRRGRPFCGLVQAAGVHDAREALVIAQSGIRCIGLPLRLPVHTEDITEHDAAALCRMLQTLPPSAAGPVCPVCI TYLDTAQDIRDLCRMLGTAHVQLHGGIPVHQLAALRAMMPGLYIIKSLVVRQTETGKDNLEELTGIIDATAQLVDAYITD THDPASGADGATGKTHDWRTSRALVRRSPLPVILAGGLTPQNVRQAVLTVRPAGVDAHTGLENPAGRKDPALCHEFARQA AAAFRQICNGDTAGSERSRLENPSAFR >Mature_266_residues TTVILPRRGRPFCGLVQAAGVHDAREALVIAQSGIRCIGLPLRLPVHTEDITEHDAAALCRMLQTLPPSAAGPVCPVCIT YLDTAQDIRDLCRMLGTAHVQLHGGIPVHQLAALRAMMPGLYIIKSLVVRQTETGKDNLEELTGIIDATAQLVDAYITDT HDPASGADGATGKTHDWRTSRALVRRSPLPVILAGGLTPQNVRQAVLTVRPAGVDAHTGLENPAGRKDPALCHEFARQAA AAFRQICNGDTAGSERSRLENPSAFR
Specific function: Unknown
COG id: COG0135
COG function: function code E; Phosphoribosylanthranilate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trpF family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001240 - InterPro: IPR011060 [H]
Pfam domain/function: PF00697 PRAI [H]
EC number: =5.3.1.24 [H]
Molecular weight: Translated: 28529; Mature: 28398
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVILPRRGRPFCGLVQAAGVHDAREALVIAQSGIRCIGLPLRLPVHTEDITEHDAAAL CCEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCCEEEECCEECCCCCHHHHHHHHHHH CRMLQTLPPSAAGPVCPVCITYLDTAQDIRDLCRMLGTAHVQLHGGIPVHQLAALRAMMP HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH GLYIIKSLVVRQTETGKDNLEELTGIIDATAQLVDAYITDTHDPASGADGATGKTHDWRT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH SRALVRRSPLPVILAGGLTPQNVRQAVLTVRPAGVDAHTGLENPAGRKDPALCHEFARQA HHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHH AAAFRQICNGDTAGSERSRLENPSAFR HHHHHHHHCCCCCCCHHHHCCCCCCCC >Mature Secondary Structure TTVILPRRGRPFCGLVQAAGVHDAREALVIAQSGIRCIGLPLRLPVHTEDITEHDAAAL CEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCCEEEECCEECCCCCHHHHHHHHHHH CRMLQTLPPSAAGPVCPVCITYLDTAQDIRDLCRMLGTAHVQLHGGIPVHQLAALRAMMP HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH GLYIIKSLVVRQTETGKDNLEELTGIIDATAQLVDAYITDTHDPASGADGATGKTHDWRT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH SRALVRRSPLPVILAGGLTPQNVRQAVLTVRPAGVDAHTGLENPAGRKDPALCHEFARQA HHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHH AAAFRQICNGDTAGSERSRLENPSAFR HHHHHHHHCCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12125824 [H]