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The map label for this gene is modF [H]

Identifier: 78356102

GI number: 78356102

Start: 1082340

End: 1083884

Strand: Reverse

Name: modF [H]

Synonym: Dde_1055

Alternate gene names: 78356102

Gene position: 1083884-1082340 (Counterclockwise)

Preceding gene: 78356103

Following gene: 78356101

Centisome position: 29.06

GC content: 63.43

Gene sequence:

>1545_bases
ATGACCCAGAACACACCGCTTTTTTCAATGGAATCCGTCAGTGTCCGGCACAACAGCGTTCCGGCACTGGATGCAGTCAG
CTGGACGCTGCACCGCGGTGCGCACTGCGCCGTGCTGGGCGGCAACGGCGCCGGCAAATCGACTCTGTTACGGCTTGCCG
CCGGAGCAATACGCCCCGACCAGCACGACGGCGGCACCGTATTATGGTTTCCCCGCGGCTCGGCAGAAGATTCGCCCATT
GCCGTACGCACACACTGCGGTCTTGTTTCGGCAGAGCAGCAGGAGCACTACCTGCGCCGCTCATGGCGCATAACAGGCGA
AGAAATCGTGCTTTCCGGCTATTTCGGCACGGACATGCTGTACCGTCCAGCCGGTACGGCACAGCGCCATGCGGCCGCCC
GACTGGCAAAAGCGCTGGACGCGGAGCATCTGATGCCGGTTATGCTCGAAGCCATGTCGCAGGGACAGTTGCGCAAAATC
CTTCTGGCGCGCGCCATGGTCCATTCGCCGCAGCTGCTTCTGCTGGATGAAGTATGCGAAGGTCTGGATGCAGCTGCCCG
CCGCGAAATGCTGGCAGCCATCGACCGTGCGGCTGCTCTGGGTACCACCGTGCTTATGAGCGGGCACAGAGCCGGGCAGT
TTCCGGACTGTATCCGGCAGGCCGTGCTGCTCCGTCAGGGCAGGCTGGTATTTACCGGCGGACTGCATCAGGCGCTGCAC
CTGATGCGCACCACGCACCAGCCCTTGCCGGCCGGTGCATCAGACACCGCGGCCGGACAGTGCAGCTGCTGCACGCCGCC
CCCCGCATGTGCGGGGGCAGCGCCGGTGGTGGAAATAGAACACGCCGATGTGTATCTGGGACGCACGCCGGTGCTGCATG
ACATAACATGGAGCATATTACCGGGGCAGAACTGGGTGGTCCGCGGCCCGAACGGAGCAGGAAAATCAACCCTGCTCCGG
CTGCTGTACGGCGATCAGAGACAGGCCTGGGGCGGTATAGTGCGCTGGTTCGGCATGGCCGGACCGGTGCCGCTTGAAGA
AGTGCGCCGCAACGTGGCGCTGGTCTCCGACAGAGTGCAGGCGCTTTACGGTCATGACGGCTACCACTCCACCCGGCTTG
AGCTGAACGGCGAGGAACTGGTGCACACCGGTTTTTACGATTCCACGGGACTGTGGGGAAAGACACCCGACGCGCAACAG
CACGCCGCAGCCCTGCGCTGGATGGACCGGCTGGGCATTGCGGCGCTGGCCGGCACTGACATCCGCCGCATGTCCTACGG
CACGTTACGGCGTTTTATGCTGGCCCGCGCTCTCGTACGCGATCCGCAGCTGCTCATCCTTGACGAACCGCTTTCCGGCC
TTGATGAATCCGCCCGCCGCATCATGCTTACCACGCTGTCCGCACTTATGCGGTCGGGCAGGCAGCTGGTGCTGGTGACC
CACCATCAGGAAGACATCCAGCCGGAAACAACCCATGAACTGCACCTGAATGCCGGACGCATAACATACTGCGGACCGGT
TTGCCCCGCAGGAGACACCCTGTGA

Upstream 100 bases:

>100_bases
CGGTACCCCGCCCCTGCAAAAGCATCTCACGGCCTAGCGCCGCGGCAGTCTGCTTCCTCCCTGCTCCGGCAGCCTTTTTT
CAACGTTTTCTCCATACACC

Downstream 100 bases:

>100_bases
CCACCGTAATCCTGCCGCGCAGGGGGCGCCCTTTTTGCGGCCTTGTTCAGGCGGCCGGAGTACATGATGCCCGGGAAGCT
CTAGTCATTGCGCAAAGCGG

Product: ATPase

Products: NA

Alternate protein names: Photorepair protein PhrA [H]

Number of amino acids: Translated: 514; Mature: 513

Protein sequence:

>514_residues
MTQNTPLFSMESVSVRHNSVPALDAVSWTLHRGAHCAVLGGNGAGKSTLLRLAAGAIRPDQHDGGTVLWFPRGSAEDSPI
AVRTHCGLVSAEQQEHYLRRSWRITGEEIVLSGYFGTDMLYRPAGTAQRHAAARLAKALDAEHLMPVMLEAMSQGQLRKI
LLARAMVHSPQLLLLDEVCEGLDAAARREMLAAIDRAAALGTTVLMSGHRAGQFPDCIRQAVLLRQGRLVFTGGLHQALH
LMRTTHQPLPAGASDTAAGQCSCCTPPPACAGAAPVVEIEHADVYLGRTPVLHDITWSILPGQNWVVRGPNGAGKSTLLR
LLYGDQRQAWGGIVRWFGMAGPVPLEEVRRNVALVSDRVQALYGHDGYHSTRLELNGEELVHTGFYDSTGLWGKTPDAQQ
HAAALRWMDRLGIAALAGTDIRRMSYGTLRRFMLARALVRDPQLLILDEPLSGLDESARRIMLTTLSALMRSGRQLVLVT
HHQEDIQPETTHELHLNAGRITYCGPVCPAGDTL

Sequences:

>Translated_514_residues
MTQNTPLFSMESVSVRHNSVPALDAVSWTLHRGAHCAVLGGNGAGKSTLLRLAAGAIRPDQHDGGTVLWFPRGSAEDSPI
AVRTHCGLVSAEQQEHYLRRSWRITGEEIVLSGYFGTDMLYRPAGTAQRHAAARLAKALDAEHLMPVMLEAMSQGQLRKI
LLARAMVHSPQLLLLDEVCEGLDAAARREMLAAIDRAAALGTTVLMSGHRAGQFPDCIRQAVLLRQGRLVFTGGLHQALH
LMRTTHQPLPAGASDTAAGQCSCCTPPPACAGAAPVVEIEHADVYLGRTPVLHDITWSILPGQNWVVRGPNGAGKSTLLR
LLYGDQRQAWGGIVRWFGMAGPVPLEEVRRNVALVSDRVQALYGHDGYHSTRLELNGEELVHTGFYDSTGLWGKTPDAQQ
HAAALRWMDRLGIAALAGTDIRRMSYGTLRRFMLARALVRDPQLLILDEPLSGLDESARRIMLTTLSALMRSGRQLVLVT
HHQEDIQPETTHELHLNAGRITYCGPVCPAGDTL
>Mature_513_residues
TQNTPLFSMESVSVRHNSVPALDAVSWTLHRGAHCAVLGGNGAGKSTLLRLAAGAIRPDQHDGGTVLWFPRGSAEDSPIA
VRTHCGLVSAEQQEHYLRRSWRITGEEIVLSGYFGTDMLYRPAGTAQRHAAARLAKALDAEHLMPVMLEAMSQGQLRKIL
LARAMVHSPQLLLLDEVCEGLDAAARREMLAAIDRAAALGTTVLMSGHRAGQFPDCIRQAVLLRQGRLVFTGGLHQALHL
MRTTHQPLPAGASDTAAGQCSCCTPPPACAGAAPVVEIEHADVYLGRTPVLHDITWSILPGQNWVVRGPNGAGKSTLLRL
LYGDQRQAWGGIVRWFGMAGPVPLEEVRRNVALVSDRVQALYGHDGYHSTRLELNGEELVHTGFYDSTGLWGKTPDAQQH
AAALRWMDRLGIAALAGTDIRRMSYGTLRRFMLARALVRDPQLLILDEPLSGLDESARRIMLTTLSALMRSGRQLVLVTH
HQEDIQPETTHELHLNAGRITYCGPVCPAGDTL

Specific function: Involved in the transport of molybdenum into the cell. Involved in photorepair. Could act on UV-induced DNA damage other than pyrimidine dimers [H]

COG id: COG1119

COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Escherichia coli, GI1786975, Length=496, Percent_Identity=28.4274193548387, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI1788897, Length=528, Percent_Identity=23.8636363636364, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1787792, Length=510, Percent_Identity=24.5098039215686, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI48994943, Length=500, Percent_Identity=24.6, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1789672, Length=210, Percent_Identity=27.6190476190476, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788225, Length=221, Percent_Identity=26.6968325791855, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI87081782, Length=223, Percent_Identity=26.457399103139, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789991, Length=486, Percent_Identity=21.6049382716049, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1786319, Length=201, Percent_Identity=28.3582089552239, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI87082267, Length=220, Percent_Identity=31.3636363636364, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI87081791, Length=234, Percent_Identity=27.3504273504274, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1790544, Length=221, Percent_Identity=28.0542986425339, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI87081709, Length=197, Percent_Identity=29.4416243654822, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1788506, Length=403, Percent_Identity=23.8213399503722, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87081834, Length=215, Percent_Identity=27.906976744186, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1787712, Length=225, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1787089, Length=235, Percent_Identity=24.6808510638298, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789873, Length=232, Percent_Identity=25.8620689655172, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787112, Length=229, Percent_Identity=29.6943231441048, Blast_Score=62, Evalue=9e-11,
Organism=Escherichia coli, GI1786872, Length=235, Percent_Identity=24.2553191489362, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI115533608, Length=213, Percent_Identity=27.2300469483568, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115535101, Length=221, Percent_Identity=30.316742081448, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17567269, Length=222, Percent_Identity=29.2792792792793, Blast_Score=65, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6320266, Length=441, Percent_Identity=23.3560090702948, Blast_Score=101, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 55899; Mature: 55768

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQNTPLFSMESVSVRHNSVPALDAVSWTLHRGAHCAVLGGNGAGKSTLLRLAAGAIRPD
CCCCCCCEEECCEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCC
QHDGGTVLWFPRGSAEDSPIAVRTHCGLVSAEQQEHYLRRSWRITGEEIVLSGYFGTDML
CCCCCEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCE
YRPAGTAQRHAAARLAKALDAEHLMPVMLEAMSQGQLRKILLARAMVHSPQLLLLDEVCE
ECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEHHHHHC
GLDAAARREMLAAIDRAAALGTTVLMSGHRAGQFPDCIRQAVLLRQGRLVFTGGLHQALH
CHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHH
LMRTTHQPLPAGASDTAAGQCSCCTPPPACAGAAPVVEIEHADVYLGRTPVLHDITWSIL
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCEEECCEEEEE
PGQNWVVRGPNGAGKSTLLRLLYGDQRQAWGGIVRWFGMAGPVPLEEVRRNVALVSDRVQ
CCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
ALYGHDGYHSTRLELNGEELVHTGFYDSTGLWGKTPDAQQHAAALRWMDRLGIAALAGTD
HHHCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHCCCC
IRRMSYGTLRRFMLARALVRDPQLLILDEPLSGLDESARRIMLTTLSALMRSGRQLVLVT
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE
HHQEDIQPETTHELHLNAGRITYCGPVCPAGDTL
CCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
TQNTPLFSMESVSVRHNSVPALDAVSWTLHRGAHCAVLGGNGAGKSTLLRLAAGAIRPD
CCCCCCEEECCEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCC
QHDGGTVLWFPRGSAEDSPIAVRTHCGLVSAEQQEHYLRRSWRITGEEIVLSGYFGTDML
CCCCCEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCE
YRPAGTAQRHAAARLAKALDAEHLMPVMLEAMSQGQLRKILLARAMVHSPQLLLLDEVCE
ECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEHHHHHC
GLDAAARREMLAAIDRAAALGTTVLMSGHRAGQFPDCIRQAVLLRQGRLVFTGGLHQALH
CHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHH
LMRTTHQPLPAGASDTAAGQCSCCTPPPACAGAAPVVEIEHADVYLGRTPVLHDITWSIL
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCEEECCEEEEE
PGQNWVVRGPNGAGKSTLLRLLYGDQRQAWGGIVRWFGMAGPVPLEEVRRNVALVSDRVQ
CCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
ALYGHDGYHSTRLELNGEELVHTGFYDSTGLWGKTPDAQQHAAALRWMDRLGIAALAGTD
HHHCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHCCCC
IRRMSYGTLRRFMLARALVRDPQLLILDEPLSGLDESARRIMLTTLSALMRSGRQLVLVT
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE
HHQEDIQPETTHELHLNAGRITYCGPVCPAGDTL
CCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8564363; 8550508; 8905232; 9278503; 8310005 [H]