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The map label for this gene is gatC

Identifier: 78356068

GI number: 78356068

Start: 1044737

End: 1045021

Strand: Reverse

Name: gatC

Synonym: Dde_1021

Alternate gene names: 78356068

Gene position: 1045021-1044737 (Counterclockwise)

Preceding gene: 78356069

Following gene: 78356067

Centisome position: 28.01

GC content: 57.19

Gene sequence:

>285_bases
ATGAGCATTTCAAAGGAACAGGTGGCGGCCATTGCCGGTCTTGCCCGCCTGCAGCTGGACGAAGACAAGAAAGAACTGTT
CGCCGGACAGTTCGCCCAGATTCTGGAATATATGGACACCCTGAACGAAGTGGACACAGACGGGGTAGCCCCGCTGTACA
GCCCTGTGCAGCATGCCACGGTATACAGGGAAGACGAGGTGCAGCGGCACTGTTCACGCGAACAGGTGCTGGCCAATGCC
CCCGAAGAAGACGGCACCTTCTTCATCGTGCCGCGCATTGTTTAA

Upstream 100 bases:

>100_bases
ACTGCGCCAGCAAAAAGCCGGCAACTAACGTTATGACAGACACGCACCGGCAAAGACGGGCGGCCCTGCCGTCCGCCCGC
ACCGGCAGGAGATACGACGC

Downstream 100 bases:

>100_bases
TTCCTTCAGCAGACCGTAATCCAGAATCATACCCAAGGATGACCATTCATGGCCCAGATATACGCACAGACACTTACTGA
AACCGCCGCCGCGCTGGCAC

Product: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MSISKEQVAAIAGLARLQLDEDKKELFAGQFAQILEYMDTLNEVDTDGVAPLYSPVQHATVYREDEVQRHCSREQVLANA
PEEDGTFFIVPRIV

Sequences:

>Translated_94_residues
MSISKEQVAAIAGLARLQLDEDKKELFAGQFAQILEYMDTLNEVDTDGVAPLYSPVQHATVYREDEVQRHCSREQVLANA
PEEDGTFFIVPRIV
>Mature_93_residues
SISKEQVAAIAGLARLQLDEDKKELFAGQFAQILEYMDTLNEVDTDGVAPLYSPVQHATVYREDEVQRHCSREQVLANAP
EEDGTFFIVPRIV

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_DESDG (Q313S4)

Other databases:

- EMBL:   CP000112
- RefSeq:   YP_387517.1
- ProteinModelPortal:   Q313S4
- SMR:   Q313S4
- STRING:   Q313S4
- GeneID:   3755523
- GenomeReviews:   CP000112_GR
- KEGG:   dde:Dde_1021
- NMPDR:   fig|207559.3.peg.40
- eggNOG:   COG0721
- HOGENOM:   HBG586403
- OMA:   QEHDFFV
- ProtClustDB:   CLSK704866
- BioCyc:   DDES207559:DDE_1021-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10567; Mature: 10436

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISKEQVAAIAGLARLQLDEDKKELFAGQFAQILEYMDTLNEVDTDGVAPLYSPVQHAT
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
VYREDEVQRHCSREQVLANAPEEDGTFFIVPRIV
HCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC
>Mature Secondary Structure 
SISKEQVAAIAGLARLQLDEDKKELFAGQFAQILEYMDTLNEVDTDGVAPLYSPVQHAT
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
VYREDEVQRHCSREQVLANAPEEDGTFFIVPRIV
HCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA