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The map label for this gene is atpF

Identifier: 78356036

GI number: 78356036

Start: 1015357

End: 1015935

Strand: Reverse

Name: atpF

Synonym: Dde_0989

Alternate gene names: 78356036

Gene position: 1015935-1015357 (Counterclockwise)

Preceding gene: 78356037

Following gene: 78356035

Centisome position: 27.24

GC content: 52.85

Gene sequence:

>579_bases
TTGAAAGGGCTGAGAAAACTGTTGTTAGTTCTTGGCGTGATGCTCCTGGCCACGGGCGTTGCGCTGGCAGCCGGCGGTGA
AGCCGCTTCCGGGGAACACCATTACGATTGGACCAACCTCGGATTCAGGCTTGCCAACTTTGCGATATTCATCGCAATCA
TCTACTACGCGGCCGGCAAGAAGCTTATTGCTTTCTTCGGCGGCCGACGCAAAGGAATCGAGCAGGAACTCAACGATCTG
GAAACGCGCAAAACCGATGCCAAGAAACAGCTTGGCGACGTTGAAAAGCGTATCGCGGATCTCGAAAATGAGCGCAAAGC
CATTATCGCAGAGTATCAGGCTCAGGGTGAGGCGCTGAAGGCGGCCATCATCAGCAAGGCGGAGACCTCCGCCAGACAAA
TCGTTGAACAAGCCAAAAAGTCCGCAGAAAACGAAGTCAAGTACGCCAAGGACGCCATGCGCGAAGAACTGGCGGACATG
ATTGTTGATGCGACCGAAAAGCTGCTCAAAGAACGGCTGGACGGTAAAGAGCAGGAAAAGCTCATTGACAAGTACTTAAC
AAAGGTGGTGCTCAATTGA

Upstream 100 bases:

>100_bases
CTATGGAAACGCTGAAAGGGCAAGTGGGCGCCCTGGCGGAAAAGGCCACTGCCAAGGTCCTCGGGTAACACTTACGGCGA
AAGTGAAGGAGGGTTCGGCT

Downstream 100 bases:

>100_bases
CCGGCAACATCGCAGCTCGTAGGTATGCAAGGGCGCTTTTTGCCATAGGGCAGAAGCAGGGGCTTGCCGAACTCGATGCT
TTCGGTTCCGAGCTCTCCGC

Product: ATP synthase F0 subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKGLRKLLLVLGVMLLATGVALAAGGEAASGEHHYDWTNLGFRLANFAIFIAIIYYAAGKKLIAFFGGRRKGIEQELNDL
ETRKTDAKKQLGDVEKRIADLENERKAIIAEYQAQGEALKAAIISKAETSARQIVEQAKKSAENEVKYAKDAMREELADM
IVDATEKLLKERLDGKEQEKLIDKYLTKVVLN

Sequences:

>Translated_192_residues
MKGLRKLLLVLGVMLLATGVALAAGGEAASGEHHYDWTNLGFRLANFAIFIAIIYYAAGKKLIAFFGGRRKGIEQELNDL
ETRKTDAKKQLGDVEKRIADLENERKAIIAEYQAQGEALKAAIISKAETSARQIVEQAKKSAENEVKYAKDAMREELADM
IVDATEKLLKERLDGKEQEKLIDKYLTKVVLN
>Mature_192_residues
MKGLRKLLLVLGVMLLATGVALAAGGEAASGEHHYDWTNLGFRLANFAIFIAIIYYAAGKKLIAFFGGRRKGIEQELNDL
ETRKTDAKKQLGDVEKRIADLENERKAIIAEYQAQGEALKAAIISKAETSARQIVEQAKKSAENEVKYAKDAMREELADM
IVDATEKLLKERLDGKEQEKLIDKYLTKVVLN

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_DESDG (Q313V6)

Other databases:

- EMBL:   CP000112
- RefSeq:   YP_387485.1
- STRING:   Q313V6
- GeneID:   3755524
- GenomeReviews:   CP000112_GR
- KEGG:   dde:Dde_0989
- NMPDR:   fig|207559.3.peg.491
- eggNOG:   NOG87654
- HOGENOM:   HBG617328
- OMA:   WGNFAFR
- ProtClustDB:   CLSK704848
- BioCyc:   DDES207559:DDE_0989-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 21339; Mature: 21339

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf30be84)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLRKLLLVLGVMLLATGVALAAGGEAASGEHHYDWTNLGFRLANFAIFIAIIYYAAGK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KLIAFFGGRRKGIEQELNDLETRKTDAKKQLGDVEKRIADLENERKAIIAEYQAQGEALK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAIISKAETSARQIVEQAKKSAENEVKYAKDAMREELADMIVDATEKLLKERLDGKEQEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LIDKYLTKVVLN
HHHHHHHHHHCH
>Mature Secondary Structure
MKGLRKLLLVLGVMLLATGVALAAGGEAASGEHHYDWTNLGFRLANFAIFIAIIYYAAGK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KLIAFFGGRRKGIEQELNDLETRKTDAKKQLGDVEKRIADLENERKAIIAEYQAQGEALK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAIISKAETSARQIVEQAKKSAENEVKYAKDAMREELADMIVDATEKLLKERLDGKEQEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LIDKYLTKVVLN
HHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA