Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78355965

Identifier: 78355965

GI number: 78355965

Start: 943636

End: 945183

Strand: Direct

Name: 78355965

Synonym: Dde_0918

Alternate gene names: NA

Gene position: 943636-945183 (Clockwise)

Preceding gene: 78355964

Following gene: 78355966

Centisome position: 25.3

GC content: 62.27

Gene sequence:

>1548_bases
ATGTGCGGCTGTCATGGCCGAAACTACCGAGAGGATCACGTGGAAAGCACCGCCCATCAGGACGAACAACCCGAAAGCCT
GGACACCACCGGCTTTGTCATCGCGCCGCTGGCCGCAGCGGCAGCGCTCGACTCGGCCGCCTTCGCCAAGGTGAACGCCG
CCGAAGCGATTCCTGCCACCTGGGAAGAACGCGCCCGCAAGGCCTGGGAATACTACGTCGAGGAGCCGCTGGTGAAAAAC
TGCGTCAACTCCTGGCGCACCTTCGCCGTGGGCGACGAGATCAAGATCACCAGCGATGACGAGACCCTCAAGGAGCAAGC
CCTGGAGGCCGCCTGGCGGCTGAACGTCTCGCAGTTTATCAAGGACATGGTTCTTCAGCTCCTGGTGAAAGGCGACGCCA
TCGGCTTCAAGCGCTTCAGCAAGTCCGGCCAGGACATCGAGGAGCTGGTCTGCGTCAACCCGGTTTCGGTCAAGGTCAAA
TACGCCCAGGGCGAACTGATCGAGGCCCGGCAATTTCCCGAAGAAACTCTCGGCGGCGGGGAATCCATCCCACTGCCCGT
CGAACAGGTGGTCCACCTCAAATGGGACGCACCGGCCTTCTCGCCCCGGGGCAATTCCCTCGTGCTTCCCGCCTTTCAAG
CCATCGAACTGCTGCGCGACTACCGCCGGGCCGAACAGGCCATCGCCAAGCGCTGGGCTACGCCCTTTCGCCTGCTCAAG
GTGGGCGGCGCGTTCGGCCAGAAGATGGTGATGCCGGACCAGCGGATGCTCGAACAGGTCCGCGACATGGTCAACAAGAT
GGACATGAAAAGCGGCCTGGTGGTCCCGTTCTACGTCAATGTCGAAACCCACGGCACCGATGGCCAGGTCCTCAACGTCG
AGGACAAGGTCAAGGAGGTGAAGGAAGACATCGTGGTGGCCCTGGGTCTGTCACGCTCGCTGGTAACCGGCGACGGCCCG
AATTTCGCCACCGCCTCGGTGAGCATGCAGAAGATGATGGTCATGATCCGCGAGATCAAACAGGCCGCACGCAAGCTCCT
CGACTGGGTGTTCGACGACTGGATGGAGCTGAACGGCCATGGCGACAAGAGCATCCAGTTTATCTTCAACGACCTCGACC
CCAGCGACGCGGTCGATTTCAAGAAGCTCCTCATCGAACTCTACGACCGCAAGCTCATCAGCCGCTCCAGCCTTCAGCTC
AAGATGGACCTGGACCCGGACATCGAGGCCGCCAACCGCGAGACCGAACGTAAGCAGATCGACCTGATGGACGAGAAGCA
GGTGAAGCCGGTGGTGGATATGGTCGTCTCCGGCATCCTCAGCGTGCCTCGCGCCCGGAAGATGCTCGGGATTCCGGCCG
AGGACGATGAACCCACGGCGGAGGCGGCATTGGTCTGGTCGGGTGACCTGGAGTCCACCGGCATTGCTGCCGTGTGCGAC
GAGTGCAGCCACTTCATCGCTGACACCAACCACTGCCGGGTCCACAACAGCGAGCGCACTTTCGACGCCCCGGCCTGTCG
TTTCATCGACCGCCGGGAGCCCCGCTAA

Upstream 100 bases:

>100_bases
CCTCACCAATCCGGTTTTCATCTGACCGCATCCTCCGACGCTTTCCACCCCGCTCCGGTAAGTAACCGGCATCGAGCCGG
GTTCGGCCCACACGGGCCGG

Downstream 100 bases:

>100_bases
TGCCGTCGGACCTGAAGCAGCGCATCCAGACGGCCACCCTGAAAAGTCTGACGGCCCGCAACCGCTACAACGACCAGGTC
ACGGCCCAGCTCACCCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MCGCHGRNYREDHVESTAHQDEQPESLDTTGFVIAPLAAAAALDSAAFAKVNAAEAIPATWEERARKAWEYYVEEPLVKN
CVNSWRTFAVGDEIKITSDDETLKEQALEAAWRLNVSQFIKDMVLQLLVKGDAIGFKRFSKSGQDIEELVCVNPVSVKVK
YAQGELIEARQFPEETLGGGESIPLPVEQVVHLKWDAPAFSPRGNSLVLPAFQAIELLRDYRRAEQAIAKRWATPFRLLK
VGGAFGQKMVMPDQRMLEQVRDMVNKMDMKSGLVVPFYVNVETHGTDGQVLNVEDKVKEVKEDIVVALGLSRSLVTGDGP
NFATASVSMQKMMVMIREIKQAARKLLDWVFDDWMELNGHGDKSIQFIFNDLDPSDAVDFKKLLIELYDRKLISRSSLQL
KMDLDPDIEAANRETERKQIDLMDEKQVKPVVDMVVSGILSVPRARKMLGIPAEDDEPTAEAALVWSGDLESTGIAAVCD
ECSHFIADTNHCRVHNSERTFDAPACRFIDRREPR

Sequences:

>Translated_515_residues
MCGCHGRNYREDHVESTAHQDEQPESLDTTGFVIAPLAAAAALDSAAFAKVNAAEAIPATWEERARKAWEYYVEEPLVKN
CVNSWRTFAVGDEIKITSDDETLKEQALEAAWRLNVSQFIKDMVLQLLVKGDAIGFKRFSKSGQDIEELVCVNPVSVKVK
YAQGELIEARQFPEETLGGGESIPLPVEQVVHLKWDAPAFSPRGNSLVLPAFQAIELLRDYRRAEQAIAKRWATPFRLLK
VGGAFGQKMVMPDQRMLEQVRDMVNKMDMKSGLVVPFYVNVETHGTDGQVLNVEDKVKEVKEDIVVALGLSRSLVTGDGP
NFATASVSMQKMMVMIREIKQAARKLLDWVFDDWMELNGHGDKSIQFIFNDLDPSDAVDFKKLLIELYDRKLISRSSLQL
KMDLDPDIEAANRETERKQIDLMDEKQVKPVVDMVVSGILSVPRARKMLGIPAEDDEPTAEAALVWSGDLESTGIAAVCD
ECSHFIADTNHCRVHNSERTFDAPACRFIDRREPR
>Mature_515_residues
MCGCHGRNYREDHVESTAHQDEQPESLDTTGFVIAPLAAAAALDSAAFAKVNAAEAIPATWEERARKAWEYYVEEPLVKN
CVNSWRTFAVGDEIKITSDDETLKEQALEAAWRLNVSQFIKDMVLQLLVKGDAIGFKRFSKSGQDIEELVCVNPVSVKVK
YAQGELIEARQFPEETLGGGESIPLPVEQVVHLKWDAPAFSPRGNSLVLPAFQAIELLRDYRRAEQAIAKRWATPFRLLK
VGGAFGQKMVMPDQRMLEQVRDMVNKMDMKSGLVVPFYVNVETHGTDGQVLNVEDKVKEVKEDIVVALGLSRSLVTGDGP
NFATASVSMQKMMVMIREIKQAARKLLDWVFDDWMELNGHGDKSIQFIFNDLDPSDAVDFKKLLIELYDRKLISRSSLQL
KMDLDPDIEAANRETERKQIDLMDEKQVKPVVDMVVSGILSVPRARKMLGIPAEDDEPTAEAALVWSGDLESTGIAAVCD
ECSHFIADTNHCRVHNSERTFDAPACRFIDRREPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57740; Mature: 57740

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGCHGRNYREDHVESTAHQDEQPESLDTTGFVIAPLAAAAALDSAAFAKVNAAEAIPAT
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
WEERARKAWEYYVEEPLVKNCVNSWRTFAVGDEIKITSDDETLKEQALEAAWRLNVSQFI
HHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCEEEECCCHHHHHHHHHHHHHHCCHHHHH
KDMVLQLLVKGDAIGFKRFSKSGQDIEELVCVNPVSVKVKYAQGELIEARQFPEETLGGG
HHHHHHHHHCCCCHHHHHHCCCCCCHHHHHCCCCCEEEEEECCCCHHHHHCCCHHHCCCC
ESIPLPVEQVVHLKWDAPAFSPRGNSLVLPAFQAIELLRDYRRAEQAIAKRWATPFRLLK
CCCCCCHHHHEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VGGAFGQKMVMPDQRMLEQVRDMVNKMDMKSGLVVPFYVNVETHGTDGQVLNVEDKVKEV
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEECHHHHHHHH
KEDIVVALGLSRSLVTGDGPNFATASVSMQKMMVMIREIKQAARKLLDWVFDDWMELNGH
HHHHEEHCCCCCCEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GDKSIQFIFNDLDPSDAVDFKKLLIELYDRKLISRSSLQLKMDLDPDIEAANRETERKQI
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHH
DLMDEKQVKPVVDMVVSGILSVPRARKMLGIPAEDDEPTAEAALVWSGDLESTGIAAVCD
CCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHH
ECSHFIADTNHCRVHNSERTFDAPACRFIDRREPR
HHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MCGCHGRNYREDHVESTAHQDEQPESLDTTGFVIAPLAAAAALDSAAFAKVNAAEAIPAT
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
WEERARKAWEYYVEEPLVKNCVNSWRTFAVGDEIKITSDDETLKEQALEAAWRLNVSQFI
HHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCEEEECCCHHHHHHHHHHHHHHCCHHHHH
KDMVLQLLVKGDAIGFKRFSKSGQDIEELVCVNPVSVKVKYAQGELIEARQFPEETLGGG
HHHHHHHHHCCCCHHHHHHCCCCCCHHHHHCCCCCEEEEEECCCCHHHHHCCCHHHCCCC
ESIPLPVEQVVHLKWDAPAFSPRGNSLVLPAFQAIELLRDYRRAEQAIAKRWATPFRLLK
CCCCCCHHHHEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VGGAFGQKMVMPDQRMLEQVRDMVNKMDMKSGLVVPFYVNVETHGTDGQVLNVEDKVKEV
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEECHHHHHHHH
KEDIVVALGLSRSLVTGDGPNFATASVSMQKMMVMIREIKQAARKLLDWVFDDWMELNGH
HHHHEEHCCCCCCEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GDKSIQFIFNDLDPSDAVDFKKLLIELYDRKLISRSSLQLKMDLDPDIEAANRETERKQI
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHH
DLMDEKQVKPVVDMVVSGILSVPRARKMLGIPAEDDEPTAEAALVWSGDLESTGIAAVCD
CCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHH
ECSHFIADTNHCRVHNSERTFDAPACRFIDRREPR
HHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA