| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355964
Identifier: 78355964
GI number: 78355964
Start: 942037
End: 943560
Strand: Direct
Name: 78355964
Synonym: Dde_0917
Alternate gene names: NA
Gene position: 942037-943560 (Clockwise)
Preceding gene: 78355963
Following gene: 78355965
Centisome position: 25.25
GC content: 62.53
Gene sequence:
>1524_bases ATGGCGGTAACCGACAAGGAGCGCAAACTTGCGGCGACCCTGAGCGATCCCGTGTTGTGGGGGCAAGCCTACCTCTACAA CCGGGATGGCTCAGGCCGCGACTATTGGCCGCATCAGGTGGAGGACCTGCGCTGCCCGGCCAAGAACATCATCCACCTCG ACGGCCGGGACGTGGGCAAGTCCATCGTTCTCTCGACCGACGCGCTCCATTACGCCTTCACCACCCGAGGCGGCCAGGGC CTCGTCGCGGCTCCGCACCAGGGGCACCTCGATACCATCATCGAGGAGATCGAGTTCCAGCTCGACACCAACCCGGATCT GATGAACAGCATTGCCCTGACCAAGTACGGCAAGCCCAAGATCCACCGCAAACCCTACTTCAGGCTGGAGTTCACCAACG GTTCGGTTCTCTATTTCCGCCCGGCCGGGGCCTATGGCGACGCCTTCCGGTCCTTGCATGTCGGCCGCGTCTGGGTCGAT GAAGGAGCCTGGCTGACCGAACGGGCCTGGAAGGCGCTGCGCCAGTGCCTCAAGGCCGGGGGGACGCTACGCATCTACTC CACGCCCAACGGCCTGCGCGACACCACCTATTACCGGCTCACCTCGTCGGAGCAGTTCCATGTGTTCCGCTGGCCGTCCT GGCTCAACCCTCTTTGGACCGAAGATCGCGAGGCCGAACTGCTGGAGTTCTACGGCGGCCGCGACAGTTCCGGCTGGCAG CACGAGGTGGCCGGTGAACACGGCAAGCCCTCCTATGGGGCCTTCAATGTCGAACAGTTCAACCTCTGTCGGCAGGATCT GCTGGAGTATCAGAAGATCGTCATCACCGATTCCGAGCTGCGCGATTGCGACACTGAGGAAGCGGCCCACGACCGGCTGG AGATGCTGCTCAACCTCACGCCCCGCAGCGGGCAGTTCTGGGTCGGCGGCGACCTGGGCTACACCAACGACCCCACCGAG ATCGTCGTATTTCAGGAGATGGAGGTCGGCGAGCGGACGCTGCTGAAGATGATCCTGCGCGTGCATCTTGAACACGTTTC CTATCCGCACATCGCCCAGATCATCGCGCTGCTGGAGCGTTACTACACCCCGGCTGGCATCGGCGTGGACAACGGCGGCA ACGGCCTGGCCGTGGTTCAGGAACTGCTCACCCTGGACAAGTACAAAGGGCTGGAGCTGGAAGGCAGGCTCAAGGGATAC GACTTCGGCGGCATGACCCGGCTGGCGGTGCGGGACGGAAAGGAAATCAAGAAGCGGACCAAGGAGCTGATGACCAGCCT CATCAACGGAGCACTACAGCGCAAGCAGCTCATTTTCCCCTCGGACGACCTGGAGGTGGAAGACCAGTTCACCACCCACA CCTACACCCTGCGGGACGGCAAGATCATCTATTCCAAGGGCAACGACCACATCATCGACGCGGTGCGCTGCGCCATGCTG ATCCGGGAGGAAGGCAACCTCGACCCGGTCGGCGAAGAGGTGGTCTCGCTCAAGCCGGTCCTCACCAATCCGGTTTTCAT CTGA
Upstream 100 bases:
>100_bases AGGCTGTCCACGACAGGAAGAACACTCTGGCTGTGCAGCAGATCCTGACGGAACTGGTGGGCACCATCCTCGGCAGCGCC TTGAGGACGGGAATGCACTG
Downstream 100 bases:
>100_bases CCGCATCCTCCGACGCTTTCCACCCCGCTCCGGTAAGTAACCGGCATCGAGCCGGGTTCGGCCCACACGGGCCGGATGTG CGGCTGTCATGGCCGAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MAVTDKERKLAATLSDPVLWGQAYLYNRDGSGRDYWPHQVEDLRCPAKNIIHLDGRDVGKSIVLSTDALHYAFTTRGGQG LVAAPHQGHLDTIIEEIEFQLDTNPDLMNSIALTKYGKPKIHRKPYFRLEFTNGSVLYFRPAGAYGDAFRSLHVGRVWVD EGAWLTERAWKALRQCLKAGGTLRIYSTPNGLRDTTYYRLTSSEQFHVFRWPSWLNPLWTEDREAELLEFYGGRDSSGWQ HEVAGEHGKPSYGAFNVEQFNLCRQDLLEYQKIVITDSELRDCDTEEAAHDRLEMLLNLTPRSGQFWVGGDLGYTNDPTE IVVFQEMEVGERTLLKMILRVHLEHVSYPHIAQIIALLERYYTPAGIGVDNGGNGLAVVQELLTLDKYKGLELEGRLKGY DFGGMTRLAVRDGKEIKKRTKELMTSLINGALQRKQLIFPSDDLEVEDQFTTHTYTLRDGKIIYSKGNDHIIDAVRCAML IREEGNLDPVGEEVVSLKPVLTNPVFI
Sequences:
>Translated_507_residues MAVTDKERKLAATLSDPVLWGQAYLYNRDGSGRDYWPHQVEDLRCPAKNIIHLDGRDVGKSIVLSTDALHYAFTTRGGQG LVAAPHQGHLDTIIEEIEFQLDTNPDLMNSIALTKYGKPKIHRKPYFRLEFTNGSVLYFRPAGAYGDAFRSLHVGRVWVD EGAWLTERAWKALRQCLKAGGTLRIYSTPNGLRDTTYYRLTSSEQFHVFRWPSWLNPLWTEDREAELLEFYGGRDSSGWQ HEVAGEHGKPSYGAFNVEQFNLCRQDLLEYQKIVITDSELRDCDTEEAAHDRLEMLLNLTPRSGQFWVGGDLGYTNDPTE IVVFQEMEVGERTLLKMILRVHLEHVSYPHIAQIIALLERYYTPAGIGVDNGGNGLAVVQELLTLDKYKGLELEGRLKGY DFGGMTRLAVRDGKEIKKRTKELMTSLINGALQRKQLIFPSDDLEVEDQFTTHTYTLRDGKIIYSKGNDHIIDAVRCAML IREEGNLDPVGEEVVSLKPVLTNPVFI >Mature_506_residues AVTDKERKLAATLSDPVLWGQAYLYNRDGSGRDYWPHQVEDLRCPAKNIIHLDGRDVGKSIVLSTDALHYAFTTRGGQGL VAAPHQGHLDTIIEEIEFQLDTNPDLMNSIALTKYGKPKIHRKPYFRLEFTNGSVLYFRPAGAYGDAFRSLHVGRVWVDE GAWLTERAWKALRQCLKAGGTLRIYSTPNGLRDTTYYRLTSSEQFHVFRWPSWLNPLWTEDREAELLEFYGGRDSSGWQH EVAGEHGKPSYGAFNVEQFNLCRQDLLEYQKIVITDSELRDCDTEEAAHDRLEMLLNLTPRSGQFWVGGDLGYTNDPTEI VVFQEMEVGERTLLKMILRVHLEHVSYPHIAQIIALLERYYTPAGIGVDNGGNGLAVVQELLTLDKYKGLELEGRLKGYD FGGMTRLAVRDGKEIKKRTKELMTSLINGALQRKQLIFPSDDLEVEDQFTTHTYTLRDGKIIYSKGNDHIIDAVRCAMLI REEGNLDPVGEEVVSLKPVLTNPVFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57582; Mature: 57451
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTDKERKLAATLSDPVLWGQAYLYNRDGSGRDYWPHQVEDLRCPAKNIIHLDGRDVGK CCCCCCCHHHHHHHCCCEEECEEEEECCCCCCCCCCCCCHHHCCCCHHHEEEECCCCCCC SIVLSTDALHYAFTTRGGQGLVAAPHQGHLDTIIEEIEFQLDTNPDLMNSIALTKYGKPK EEEEEECCEEEEEEECCCCEEEECCCCCCHHHHHHHHHEEECCCHHHHHHHHHCCCCCCC IHRKPYFRLEFTNGSVLYFRPAGAYGDAFRSLHVGRVWVDEGAWLTERAWKALRQCLKAG CCCCCEEEEEECCCCEEEEECCCCHHHHHHHEECCEEEECCCCCHHHHHHHHHHHHHHCC GTLRIYSTPNGLRDTTYYRLTSSEQFHVFRWPSWLNPLWTEDREAELLEFYGGRDSSGWQ CEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCC HEVAGEHGKPSYGAFNVEQFNLCRQDLLEYQKIVITDSELRDCDTEEAAHDRLEMLLNLT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCHHHCCCCHHHHHHHHHHHHCCC PRSGQFWVGGDLGYTNDPTEIVVFQEMEVGERTLLKMILRVHLEHVSYPHIAQIIALLER CCCCCEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH YYTPAGIGVDNGGNGLAVVQELLTLDKYKGLELEGRLKGYDFGGMTRLAVRDGKEIKKRT HCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECCCHHHHHHH KELMTSLINGALQRKQLIFPSDDLEVEDQFTTHTYTLRDGKIIYSKGNDHIIDAVRCAML HHHHHHHHHHHHHHCEEECCCCCCCCCCCEEEEEEEEECCEEEEECCCCHHHHHHHHHHH IREEGNLDPVGEEVVSLKPVLTNPVFI HHCCCCCCCCCHHHHEECHHHCCCCCC >Mature Secondary Structure AVTDKERKLAATLSDPVLWGQAYLYNRDGSGRDYWPHQVEDLRCPAKNIIHLDGRDVGK CCCCCCHHHHHHHCCCEEECEEEEECCCCCCCCCCCCCHHHCCCCHHHEEEECCCCCCC SIVLSTDALHYAFTTRGGQGLVAAPHQGHLDTIIEEIEFQLDTNPDLMNSIALTKYGKPK EEEEEECCEEEEEEECCCCEEEECCCCCCHHHHHHHHHEEECCCHHHHHHHHHCCCCCCC IHRKPYFRLEFTNGSVLYFRPAGAYGDAFRSLHVGRVWVDEGAWLTERAWKALRQCLKAG CCCCCEEEEEECCCCEEEEECCCCHHHHHHHEECCEEEECCCCCHHHHHHHHHHHHHHCC GTLRIYSTPNGLRDTTYYRLTSSEQFHVFRWPSWLNPLWTEDREAELLEFYGGRDSSGWQ CEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCC HEVAGEHGKPSYGAFNVEQFNLCRQDLLEYQKIVITDSELRDCDTEEAAHDRLEMLLNLT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCHHHCCCCHHHHHHHHHHHHCCC PRSGQFWVGGDLGYTNDPTEIVVFQEMEVGERTLLKMILRVHLEHVSYPHIAQIIALLER CCCCCEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH YYTPAGIGVDNGGNGLAVVQELLTLDKYKGLELEGRLKGYDFGGMTRLAVRDGKEIKKRT HCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECCCHHHHHHH KELMTSLINGALQRKQLIFPSDDLEVEDQFTTHTYTLRDGKIIYSKGNDHIIDAVRCAML HHHHHHHHHHHHHHCEEECCCCCCCCCCCEEEEEEEEECCEEEEECCCCHHHHHHHHHHH IREEGNLDPVGEEVVSLKPVLTNPVFI HHCCCCCCCCCHHHHEECHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA