| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is yhiI [C]
Identifier: 78355747
GI number: 78355747
Start: 716215
End: 717294
Strand: Reverse
Name: yhiI [C]
Synonym: Dde_0700
Alternate gene names: 78355747
Gene position: 717294-716215 (Counterclockwise)
Preceding gene: 78355750
Following gene: 78355746
Centisome position: 19.23
GC content: 63.89
Gene sequence:
>1080_bases ATGCCTTTCAGACTCTCCCCCGCCACCATCATACCGGTCCTGGTCACCGTCACGGCGGTTTTTCTTTTCATGCCGCAACG GGAAGAACCGGCAGGGGTCTTTCAGGGGTATGTGGAAGGCGAATATGTATATGTGGGCGCCGGTGCCGGAGGCAGGCTGG AACGTCTGCCCGTACGCCGCGGCGACCATGTGCTTGCCGGTGACGTGCTGTTTGCGCTGGAAGAAGGACAGGAAGGACCG GCCGTGCGCGAGGCTGAACATAACGTGCGCAACGCTCTGGAAAAACTTGAAGACCTGAAAAAAGGCCAGCGCCCCAGCGA ACTGAGGGCCATTGAGGCCCGTCTGCGTCAGGCCGATGCCGCCCGCGAACTGGCCGGTGATGTGCTTACCCGCCGCGATG CACTGTTCAAGGAAGGCACCATTTCGCGCGAAGAACTGGACCGTGCCCGCACGCAGCTGGATGAGACAGCCGCAAAGGTG CGCCAGATACGGGCCGAACTGGCCACAGCCCGCATGGGAGGACGTGAAGACGCCATACGCGCAGCGCAGGCGCAGGCGCA GGCGGCACAGGCCCGTCTACAGCAGGTGCGCTGGCAGCTGGACGAAAAAATCCAGCGCGCACCGGCTGCCGCTGTGGTGC ACGACACACTGTACCGCACCGGTGAATGGGTACCCGCGGGCACACCGGTGGTCACGCTGCTGCCGCCGCAAAATATCAAG GTGCGCTTTTTTGTCCCGCAGCCGCTGGCCGGCCGCATCCGCACGGGCGACAAGGCCGTGGTGCATGTGGACGGCGGCGG AGCACCGGTCACCATGTGCGTCAGCTACATTGCAGACAATGCCGAATACACGCCACCGGTCATCTATTCCAGCAGGCAGC GGGCCAAACTGGTATTCATGATGGAAGCTTCGGCCTGTGCCGCGCCCGCCGCCGCAACACCGGACCGCACGCCGCAGCAT CTGCCCGCCGTGCAGGACCATCCTGCCGCACTGCATCCCGGTCAGCCTGTGGATGTTCTGATTCCCTCGCTGCGTACCGT ACCAGCGCAGTCTCAGGGCTCCGCTTCCGGACAGGAATAG
Upstream 100 bases:
>100_bases TGCCGCCTGCGCGCACCGGCTGTCGGCATACTTCCGTTGCCCTTGTTCCCCGATTGCTGCTATGTGTACAATATACATAC AGCAACGTCAGGAGCCGACC
Downstream 100 bases:
>100_bases CCCATGCAGACACCACCATTACAGGACAGCACGGCATCCGCCCCGCAACAGACGGCACCCGCAGGCGCAACAACCGCCCC CCCGCTGGTCATCGACGTTC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MPFRLSPATIIPVLVTVTAVFLFMPQREEPAGVFQGYVEGEYVYVGAGAGGRLERLPVRRGDHVLAGDVLFALEEGQEGP AVREAEHNVRNALEKLEDLKKGQRPSELRAIEARLRQADAARELAGDVLTRRDALFKEGTISREELDRARTQLDETAAKV RQIRAELATARMGGREDAIRAAQAQAQAAQARLQQVRWQLDEKIQRAPAAAVVHDTLYRTGEWVPAGTPVVTLLPPQNIK VRFFVPQPLAGRIRTGDKAVVHVDGGGAPVTMCVSYIADNAEYTPPVIYSSRQRAKLVFMMEASACAAPAAATPDRTPQH LPAVQDHPAALHPGQPVDVLIPSLRTVPAQSQGSASGQE
Sequences:
>Translated_359_residues MPFRLSPATIIPVLVTVTAVFLFMPQREEPAGVFQGYVEGEYVYVGAGAGGRLERLPVRRGDHVLAGDVLFALEEGQEGP AVREAEHNVRNALEKLEDLKKGQRPSELRAIEARLRQADAARELAGDVLTRRDALFKEGTISREELDRARTQLDETAAKV RQIRAELATARMGGREDAIRAAQAQAQAAQARLQQVRWQLDEKIQRAPAAAVVHDTLYRTGEWVPAGTPVVTLLPPQNIK VRFFVPQPLAGRIRTGDKAVVHVDGGGAPVTMCVSYIADNAEYTPPVIYSSRQRAKLVFMMEASACAAPAAATPDRTPQH LPAVQDHPAALHPGQPVDVLIPSLRTVPAQSQGSASGQE >Mature_358_residues PFRLSPATIIPVLVTVTAVFLFMPQREEPAGVFQGYVEGEYVYVGAGAGGRLERLPVRRGDHVLAGDVLFALEEGQEGPA VREAEHNVRNALEKLEDLKKGQRPSELRAIEARLRQADAARELAGDVLTRRDALFKEGTISREELDRARTQLDETAAKVR QIRAELATARMGGREDAIRAAQAQAQAAQARLQQVRWQLDEKIQRAPAAAVVHDTLYRTGEWVPAGTPVVTLLPPQNIKV RFFVPQPLAGRIRTGDKAVVHVDGGGAPVTMCVSYIADNAEYTPPVIYSSRQRAKLVFMMEASACAAPAAATPDRTPQHL PAVQDHPAALHPGQPVDVLIPSLRTVPAQSQGSASGQE
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
Organism=Escherichia coli, GI1789900, Length=333, Percent_Identity=27.6276276276276, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787013, Length=292, Percent_Identity=26.7123287671233, Blast_Score=76, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 - InterPro: IPR022936 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 38965; Mature: 38834
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFRLSPATIIPVLVTVTAVFLFMPQREEPAGVFQGYVEGEYVYVGAGAGGRLERLPVRR CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCCCCCCEECCCCC GDHVLAGDVLFALEEGQEGPAVREAEHNVRNALEKLEDLKKGQRPSELRAIEARLRQADA CCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ARELAGDVLTRRDALFKEGTISREELDRARTQLDETAAKVRQIRAELATARMGGREDAIR HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AAQAQAQAAQARLQQVRWQLDEKIQRAPAAAVVHDTLYRTGEWVPAGTPVVTLLPPQNIK HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCE VRFFVPQPLAGRIRTGDKAVVHVDGGGAPVTMCVSYIADNAEYTPPVIYSSRQRAKLVFM EEEEECCCCCCCEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEE MEASACAAPAAATPDRTPQHLPAVQDHPAALHPGQPVDVLIPSLRTVPAQSQGSASGQE EECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCC >Mature Secondary Structure PFRLSPATIIPVLVTVTAVFLFMPQREEPAGVFQGYVEGEYVYVGAGAGGRLERLPVRR CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCCCCCCEECCCCC GDHVLAGDVLFALEEGQEGPAVREAEHNVRNALEKLEDLKKGQRPSELRAIEARLRQADA CCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ARELAGDVLTRRDALFKEGTISREELDRARTQLDETAAKVRQIRAELATARMGGREDAIR HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AAQAQAQAAQARLQQVRWQLDEKIQRAPAAAVVHDTLYRTGEWVPAGTPVVTLLPPQNIK HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCE VRFFVPQPLAGRIRTGDKAVVHVDGGGAPVTMCVSYIADNAEYTPPVIYSSRQRAKLVFM EEEEECCCCCCCEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEE MEASACAAPAAATPDRTPQHLPAVQDHPAALHPGQPVDVLIPSLRTVPAQSQGSASGQE EECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA