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The map label for this gene is dcrA [H]

Identifier: 78355750

GI number: 78355750

Start: 720388

End: 722805

Strand: Reverse

Name: dcrA [H]

Synonym: Dde_0703

Alternate gene names: 78355750

Gene position: 722805-720388 (Counterclockwise)

Preceding gene: 78355751

Following gene: 78355747

Centisome position: 19.38

GC content: 57.61

Gene sequence:

>2418_bases
ATGAAGCTCGGCTGGAAGTTGTCCCTCCCCCAGATAGTTATCGTGCTGGCCCTCGGTGTCGCCAGTTACACCGTCATCAG
TTCTTCGTTTGAGCGCATGCAGGAAAAATTCGTCTCCTCCATGGTGACGGATGTCTTTCACACCGTTGATTCAGGCATCG
ACACGGCCGGAACATCGGCGCTGGCTCTGGCAGCGGCCTTCAGCCGCCAGCCGGAAGTCATAGCAGCCTTTCAGCTGGCC
CACAGCGGCAACATAAACGACGAAAATTCGCCGCAGGGGCAGGCTGCCCGCGACATGCTGCGCAAATCCATGGCACCCGC
ACTGGCAGGGTACGAAAACAGCACAGGCCGCAAAATGCAGCTGCACTACCATCTGCCCAACGGCCGCAGTCTGGTACGCC
TGTGGCGTAAAAAACAAGTGCAGCGCAACGGAGTCTGGACTGATGTTTCCGACGATATCAGCAGCTTCCGCAACACCGTG
CTGGATGTGAACCGCACCGGCAACCCCGTACAGGGCATTGAGCTGGGACGCGGCGGCTTTGTGGTGCGCGGGGTGGCTCC
GGTCAAAGGGCCCGACGGCAAAGCGCTGGGATCCGTTGAAACACTGGTGCCCTTCGACCCCATTCTTGAAGCAAGTTCCG
GCCATGGCACCAGCCTTTCTCTGTTCATGAACAAAGACCAGCTTTCCGTGGCCCGTTCTCTCAACGATCCGCAGAAGTAT
CCGCTGACCGGAGACAGCTTTGTGCTGGTAAGCGGGCACGACAACGCCGCACTGCTGGAAGATGTTGACACGCAGCTGCT
CGAAGAGGGCAAAACAGGACTTGCCGTCAGACGCCACGGCACACAGGCTCTGGCCACGCACCCTGTGCGCGACTACCGCG
GCGAACAGGTTGGCGTGCTGGTATGCGCTCTCGATCTTTCCGAATTCGTCGCCATAAAGGCATACTCCTCCAACATGCTG
GCCGCCGCACTGGCTGTCATTCTGGTTCTTCCAGCAGTGGCTTCGTTCATACTGCTGCGCCGGTTCATCATCCGCCCTGT
CAGCCTTATGGTTGATAAAATAAAAGACATTGCAGAAGACAGGGCCAATTTTGACGACCGGCTGCACGACAGCCAGAAAG
ACGAAATAGGCGACCTTGCCCGCTGGTTCAACACCCTGATGAACAAGCTGGGACTGATGATGACCGACATGCAGCGCTAT
GTGGACGTGCTCAATACGGTACCTGATCCCATTTTCGCCGTGGATGAAGAATACAACATCATCATGGCCAACAAAGCCAC
GCAGGACTTTCTGGGACTGGACACGAACAAGCTGAAAGACTGCAACTGCCATGACCAGTTCAGCACCGAAGTCTGCCAGA
CGGAACGGTGTCCCATTGAAATGGCCAAGAAAGTCAACGGGCCGGTAAAGGCCGACATCATGTCCATAGACCGCGACGGT
CAGACGCTGTACGTCAAGCCTTCTGCCGATGTGCTGCGTGACGCGCAGGGACGCAAGATGGGCTATGTGGAAGTGGCCTC
CAACGTGACCGACCTTGTGCATTCGCAAAACGCCATCGAAGAACAGCTCGCACGCATCAGCAAAGTGAATGAGGCCACAC
GCGAAGCGGCTTCACAGGTTACGGACACCACACACCAGCTTTCCGGTGAATTCGAGCAGATCAATTCCGGCATACTGACC
CAGCAGCAGCGCGTAACCGAAACCGCAACAGCCATGGAGCAGATGAACGCCACGGTGATGGAGGTGGCCAGAAACGCTTC
CGCCGCCGCGCAGCAGACAGCCGATACCCGCGATCAGGCACTGGAAGGAGCCAGAATAGTGGGTGAATCTGTCAATGCCA
TACTGCGCGTGCAGCAACAGACGGCGGCACTTAAGGAAGTAATGCAGAACCTCGGCTCGCGGGCGGAAGGCATAGGACAG
GTAATGACTGTCATACGCGACATAGCGGACCAGACAAACCTGCTGGCACTCAATGCAGCCATTGAAGCAGCCCGCGCGGG
TGACGCCGGACGCGGGTTTGCCGTGGTGGCGGACGAGGTGCGCAAACTGGCCGAAAAAACCATGAGCGCTACCCACGAAG
TGGGCGACGCCATCAGCGCCATTCAGGACGGTGCACAGGAATCCATCAGAAATGTGGACACCACCACGGAAATGGTGGGC
AATGCCTCGCAGCTTGCGGAACAGTCAGGTGCCGCTCTGAACAAAATAGTGGAGCTGGTCAACCTTTCCTCATCGCAGGT
GGACGCCATTGCCACTGCCGCCGAGGAACAGTCGGCGGCAAGCGAACAGATACGCAGCGCCATGGACGAAGTGAATCATA
TTGCCAACGAAGTGGCCGAACGCATGGGCGAATCCTCAAACTCCGTCCACAGCCTTTCGGAACTGGCTTCTCAGCTGGAC
ATGCTGTCCAAAAGCTGA

Upstream 100 bases:

>100_bases
TACATGGCAGAAAAGTGCAAAGATCCCATGTGGCGCCGGCGGGCCGCCCAGATACCTTCATATTGCCTTTTACAGGCTCA
ACCATCTGCAAGGATTTCAT

Downstream 100 bases:

>100_bases
CTCCGGCAACACGCTGCGCAAACTGAATAAAAAAAACCGGCCGGTGCATGCACCGGCCGGTTTATTCCGTGCAAAAAACT
ACCGCACTCTGACCACGGGA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 805; Mature: 805

Protein sequence:

>805_residues
MKLGWKLSLPQIVIVLALGVASYTVISSSFERMQEKFVSSMVTDVFHTVDSGIDTAGTSALALAAAFSRQPEVIAAFQLA
HSGNINDENSPQGQAARDMLRKSMAPALAGYENSTGRKMQLHYHLPNGRSLVRLWRKKQVQRNGVWTDVSDDISSFRNTV
LDVNRTGNPVQGIELGRGGFVVRGVAPVKGPDGKALGSVETLVPFDPILEASSGHGTSLSLFMNKDQLSVARSLNDPQKY
PLTGDSFVLVSGHDNAALLEDVDTQLLEEGKTGLAVRRHGTQALATHPVRDYRGEQVGVLVCALDLSEFVAIKAYSSNML
AAALAVILVLPAVASFILLRRFIIRPVSLMVDKIKDIAEDRANFDDRLHDSQKDEIGDLARWFNTLMNKLGLMMTDMQRY
VDVLNTVPDPIFAVDEEYNIIMANKATQDFLGLDTNKLKDCNCHDQFSTEVCQTERCPIEMAKKVNGPVKADIMSIDRDG
QTLYVKPSADVLRDAQGRKMGYVEVASNVTDLVHSQNAIEEQLARISKVNEATREAASQVTDTTHQLSGEFEQINSGILT
QQQRVTETATAMEQMNATVMEVARNASAAAQQTADTRDQALEGARIVGESVNAILRVQQQTAALKEVMQNLGSRAEGIGQ
VMTVIRDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSATHEVGDAISAIQDGAQESIRNVDTTTEMVG
NASQLAEQSGAALNKIVELVNLSSSQVDAIATAAEEQSAASEQIRSAMDEVNHIANEVAERMGESSNSVHSLSELASQLD
MLSKS

Sequences:

>Translated_805_residues
MKLGWKLSLPQIVIVLALGVASYTVISSSFERMQEKFVSSMVTDVFHTVDSGIDTAGTSALALAAAFSRQPEVIAAFQLA
HSGNINDENSPQGQAARDMLRKSMAPALAGYENSTGRKMQLHYHLPNGRSLVRLWRKKQVQRNGVWTDVSDDISSFRNTV
LDVNRTGNPVQGIELGRGGFVVRGVAPVKGPDGKALGSVETLVPFDPILEASSGHGTSLSLFMNKDQLSVARSLNDPQKY
PLTGDSFVLVSGHDNAALLEDVDTQLLEEGKTGLAVRRHGTQALATHPVRDYRGEQVGVLVCALDLSEFVAIKAYSSNML
AAALAVILVLPAVASFILLRRFIIRPVSLMVDKIKDIAEDRANFDDRLHDSQKDEIGDLARWFNTLMNKLGLMMTDMQRY
VDVLNTVPDPIFAVDEEYNIIMANKATQDFLGLDTNKLKDCNCHDQFSTEVCQTERCPIEMAKKVNGPVKADIMSIDRDG
QTLYVKPSADVLRDAQGRKMGYVEVASNVTDLVHSQNAIEEQLARISKVNEATREAASQVTDTTHQLSGEFEQINSGILT
QQQRVTETATAMEQMNATVMEVARNASAAAQQTADTRDQALEGARIVGESVNAILRVQQQTAALKEVMQNLGSRAEGIGQ
VMTVIRDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSATHEVGDAISAIQDGAQESIRNVDTTTEMVG
NASQLAEQSGAALNKIVELVNLSSSQVDAIATAAEEQSAASEQIRSAMDEVNHIANEVAERMGESSNSVHSLSELASQLD
MLSKS
>Mature_805_residues
MKLGWKLSLPQIVIVLALGVASYTVISSSFERMQEKFVSSMVTDVFHTVDSGIDTAGTSALALAAAFSRQPEVIAAFQLA
HSGNINDENSPQGQAARDMLRKSMAPALAGYENSTGRKMQLHYHLPNGRSLVRLWRKKQVQRNGVWTDVSDDISSFRNTV
LDVNRTGNPVQGIELGRGGFVVRGVAPVKGPDGKALGSVETLVPFDPILEASSGHGTSLSLFMNKDQLSVARSLNDPQKY
PLTGDSFVLVSGHDNAALLEDVDTQLLEEGKTGLAVRRHGTQALATHPVRDYRGEQVGVLVCALDLSEFVAIKAYSSNML
AAALAVILVLPAVASFILLRRFIIRPVSLMVDKIKDIAEDRANFDDRLHDSQKDEIGDLARWFNTLMNKLGLMMTDMQRY
VDVLNTVPDPIFAVDEEYNIIMANKATQDFLGLDTNKLKDCNCHDQFSTEVCQTERCPIEMAKKVNGPVKADIMSIDRDG
QTLYVKPSADVLRDAQGRKMGYVEVASNVTDLVHSQNAIEEQLARISKVNEATREAASQVTDTTHQLSGEFEQINSGILT
QQQRVTETATAMEQMNATVMEVARNASAAAQQTADTRDQALEGARIVGESVNAILRVQQQTAALKEVMQNLGSRAEGIGQ
VMTVIRDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSATHEVGDAISAIQDGAQESIRNVDTTTEMVG
NASQLAEQSGAALNKIVELVNLSSSQVDAIATAAEEQSAASEQIRSAMDEVNHIANEVAERMGESSNSVHSLSELASQLD
MLSKS

Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=270, Percent_Identity=34.0740740740741, Blast_Score=111, Evalue=2e-25,
Organism=Escherichia coli, GI1787690, Length=266, Percent_Identity=32.7067669172932, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI2367378, Length=266, Percent_Identity=31.5789473684211, Blast_Score=106, Evalue=7e-24,
Organism=Escherichia coli, GI1788194, Length=298, Percent_Identity=31.5436241610738, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1789453, Length=263, Percent_Identity=30.0380228136882, Blast_Score=97, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 87080; Mature: 87080

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGWKLSLPQIVIVLALGVASYTVISSSFERMQEKFVSSMVTDVFHTVDSGIDTAGTSA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LALAAAFSRQPEVIAAFQLAHSGNINDENSPQGQAARDMLRKSMAPALAGYENSTGRKMQ
HHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE
LHYHLPNGRSLVRLWRKKQVQRNGVWTDVSDDISSFRNTVLDVNRTGNPVQGIELGRGGF
EEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCCCCCCCEEECCCCE
VVRGVAPVKGPDGKALGSVETLVPFDPILEASSGHGTSLSLFMNKDQLSVARSLNDPQKY
EEEECCCCCCCCCCCCCCCHHHCCCHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCCCCC
PLTGDSFVLVSGHDNAALLEDVDTQLLEEGKTGLAVRRHGTQALATHPVRDYRGEQVGVL
CCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEHHCCCHHHHHCCHHHCCCCCEEEE
VCALDLSEFVAIKAYSSNMLAAALAVILVLPAVASFILLRRFIIRPVSLMVDKIKDIAED
EEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RANFDDRLHDSQKDEIGDLARWFNTLMNKLGLMMTDMQRYVDVLNTVPDPIFAVDEEYNI
HCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCE
IMANKATQDFLGLDTNKLKDCNCHDQFSTEVCQTERCPIEMAKKVNGPVKADIMSIDRDG
EEECCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCEEHHEEECCCC
QTLYVKPSADVLRDAQGRKMGYVEVASNVTDLVHSQNAIEEQLARISKVNEATREAASQV
CEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDTTHQLSGEFEQINSGILTQQQRVTETATAMEQMNATVMEVARNASAAAQQTADTRDQA
HHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEGARIVGESVNAILRVQQQTAALKEVMQNLGSRAEGIGQVMTVIRDIADQTNLLALNAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEHHHH
IEAARAGDAGRGFAVVADEVRKLAEKTMSATHEVGDAISAIQDGAQESIRNVDTTTEMVG
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
NASQLAEQSGAALNKIVELVNLSSSQVDAIATAAEEQSAASEQIRSAMDEVNHIANEVAE
CHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMGESSNSVHSLSELASQLDMLSKS
HHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLGWKLSLPQIVIVLALGVASYTVISSSFERMQEKFVSSMVTDVFHTVDSGIDTAGTSA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LALAAAFSRQPEVIAAFQLAHSGNINDENSPQGQAARDMLRKSMAPALAGYENSTGRKMQ
HHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE
LHYHLPNGRSLVRLWRKKQVQRNGVWTDVSDDISSFRNTVLDVNRTGNPVQGIELGRGGF
EEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCCCCCCCEEECCCCE
VVRGVAPVKGPDGKALGSVETLVPFDPILEASSGHGTSLSLFMNKDQLSVARSLNDPQKY
EEEECCCCCCCCCCCCCCCHHHCCCHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCCCCC
PLTGDSFVLVSGHDNAALLEDVDTQLLEEGKTGLAVRRHGTQALATHPVRDYRGEQVGVL
CCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEHHCCCHHHHHCCHHHCCCCCEEEE
VCALDLSEFVAIKAYSSNMLAAALAVILVLPAVASFILLRRFIIRPVSLMVDKIKDIAED
EEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RANFDDRLHDSQKDEIGDLARWFNTLMNKLGLMMTDMQRYVDVLNTVPDPIFAVDEEYNI
HCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCE
IMANKATQDFLGLDTNKLKDCNCHDQFSTEVCQTERCPIEMAKKVNGPVKADIMSIDRDG
EEECCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCEEHHEEECCCC
QTLYVKPSADVLRDAQGRKMGYVEVASNVTDLVHSQNAIEEQLARISKVNEATREAASQV
CEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDTTHQLSGEFEQINSGILTQQQRVTETATAMEQMNATVMEVARNASAAAQQTADTRDQA
HHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEGARIVGESVNAILRVQQQTAALKEVMQNLGSRAEGIGQVMTVIRDIADQTNLLALNAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEHHHH
IEAARAGDAGRGFAVVADEVRKLAEKTMSATHEVGDAISAIQDGAQESIRNVDTTTEMVG
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
NASQLAEQSGAALNKIVELVNLSSSQVDAIATAAEEQSAASEQIRSAMDEVNHIANEVAE
CHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMGESSNSVHSLSELASQLDMLSKS
HHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]