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The map label for this gene is yybA [H]

Identifier: 78355716

GI number: 78355716

Start: 684194

End: 684757

Strand: Reverse

Name: yybA [H]

Synonym: Dde_0669

Alternate gene names: 78355716

Gene position: 684757-684194 (Counterclockwise)

Preceding gene: 78355717

Following gene: 78355715

Centisome position: 18.36

GC content: 61.35

Gene sequence:

>564_bases
ATGCCGCATACCATTCCGCACAAAGCAAAACCCCGGCCACTGTTACGCAGACCCCGACAACGCGCGGTTGCCCGACCGGC
ACAGGCCTGTCCGGCCGGAGCCTGCCCCTGCGCTGAAGCCCCGCTGTACCGCAGCCGCAGAACCAGCATAGGCAGGGCCA
TCGCACTGGTTGCCCGCAAAACGAGAATGCGCCTCACAGAAACGCTGGCACAGCTGGATCTGGGAGCAGGACAATATCCT
TTTGTCATCGCGCTGCTGCGCTACGGCGACTGTTCTCAGGAACAGCTGGCAGAGCTGACCGCCATGGACAAAAGTACCAC
AGCGCGGGCACTGAAAGCGCTGGAGCAGAAGGGTTTCATCACCCGAAAACCGGCCTGCGACAACAGGCGCATGAACATTG
TGCACGCCACGTCAAAAGCGGCACGGCTGGAACACGAGATACACAGGCGTCTCAACGCCGTAAACAGCGAGCTGGCCGCC
GGTCTTTCGGCCCGAGAACGCCGCCTGCTGCTGCGTCTGCTGCATATTCTGGAAGACAACACGCAGGCGTTCTCCACCCT
GTAA

Upstream 100 bases:

>100_bases
TGCCTTCCCAACGATGAGAGACTTTTTTTATACAGCGTATTGACCGGACAACCAGCCGGCGCTAATAGTTGCATCTGCAA
CAATCATTTTTTACATCACC

Downstream 100 bases:

>100_bases
CCATCTACCCCTGCAGGCCCCATGCCCGATTTCATCCTTATACTGCTTCTGGCGGCTTTTCCCGCCCTGTCCACAGACAT
GTACCTTCCTGCCATCCCGA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MPHTIPHKAKPRPLLRRPRQRAVARPAQACPAGACPCAEAPLYRSRRTSIGRAIALVARKTRMRLTETLAQLDLGAGQYP
FVIALLRYGDCSQEQLAELTAMDKSTTARALKALEQKGFITRKPACDNRRMNIVHATSKAARLEHEIHRRLNAVNSELAA
GLSARERRLLLRLLHILEDNTQAFSTL

Sequences:

>Translated_187_residues
MPHTIPHKAKPRPLLRRPRQRAVARPAQACPAGACPCAEAPLYRSRRTSIGRAIALVARKTRMRLTETLAQLDLGAGQYP
FVIALLRYGDCSQEQLAELTAMDKSTTARALKALEQKGFITRKPACDNRRMNIVHATSKAARLEHEIHRRLNAVNSELAA
GLSARERRLLLRLLHILEDNTQAFSTL
>Mature_186_residues
PHTIPHKAKPRPLLRRPRQRAVARPAQACPAGACPCAEAPLYRSRRTSIGRAIALVARKTRMRLTETLAQLDLGAGQYPF
VIALLRYGDCSQEQLAELTAMDKSTTARALKALEQKGFITRKPACDNRRMNIVHATSKAARLEHEIHRRLNAVNSELAAG
LSARERRLLLRLLHILEDNTQAFSTL

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 20874; Mature: 20742

Theoretical pI: Translated: 11.52; Mature: 11.52

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHTIPHKAKPRPLLRRPRQRAVARPAQACPAGACPCAEAPLYRSRRTSIGRAIALVARK
CCCCCCCCCCCCHHHHCHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TRMRLTETLAQLDLGAGQYPFVIALLRYGDCSQEQLAELTAMDKSTTARALKALEQKGFI
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCE
TRKPACDNRRMNIVHATSKAARLEHEIHRRLNAVNSELAAGLSARERRLLLRLLHILEDN
ECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
TQAFSTL
HHHHHCC
>Mature Secondary Structure 
PHTIPHKAKPRPLLRRPRQRAVARPAQACPAGACPCAEAPLYRSRRTSIGRAIALVARK
CCCCCCCCCCCHHHHCHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TRMRLTETLAQLDLGAGQYPFVIALLRYGDCSQEQLAELTAMDKSTTARALKALEQKGFI
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCE
TRKPACDNRRMNIVHATSKAARLEHEIHRRLNAVNSELAAGLSARERRLLLRLLHILEDN
ECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
TQAFSTL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]